RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.41
USB1-216ENST00000624720 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.41
USB1-216ENST00000624720 C1orf134Q5TEV5 83 aa6.21□□□□□ -1.41
USB1-216ENST00000624720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
USB1-216ENST00000624720 KRTAP10-3P60369 221 aa6.21□□□□□ -1.42
USB1-216ENST00000624720 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
USB1-216ENST00000624720 KRTAP21-3Q3LHN1 58 aa6.2□□□□□ -1.42
USB1-216ENST00000624720 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
USB1-216ENST00000624720 LOC110117498A0A087WWA1 95 aa6.2□□□□□ -1.42
USB1-216ENST00000624720 C4orf3Q8WVX3 66 aa6.2□□□□□ -1.42
USB1-216ENST00000624720 RNASE1P07998 156 aaKnown RBP6.19□□□□□ -1.42
USB1-216ENST00000624720 KLK9Q2XQG4 91 aa6.19□□□□□ -1.42
USB1-216ENST00000624720 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
USB1-216ENST00000624720 B9D2Q9BPU9 175 aa6.19□□□□□ -1.42
USB1-216ENST00000624720 LCE6AA0A183 80 aa6.18□□□□□ -1.42
USB1-216ENST00000624720 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
USB1-216ENST00000624720 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
USB1-216ENST00000624720 Q8NAQ8 132 aa6.18□□□□□ -1.42
USB1-216ENST00000624720 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
USB1-216ENST00000624720 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
USB1-216ENST00000624720 IGHV3-16A0A0C4DH30 117 aa6.17□□□□□ -1.42
USB1-216ENST00000624720 M0R2N4 97 aa6.17□□□□□ -1.42
USB1-216ENST00000624720 NDUFB1O75438 58 aa6.17□□□□□ -1.42
USB1-216ENST00000624720 DEFB114Q30KQ6 69 aa6.17□□□□□ -1.42
USB1-216ENST00000624720 PKD1L1Q8TDX9 2849 aa6.16□□□□□ -1.42
USB1-216ENST00000624720 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
USB1-216ENST00000624720 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
USB1-216ENST00000624720 PDE6GP18545 87 aa6.16□□□□□ -1.42
USB1-216ENST00000624720 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
USB1-216ENST00000624720 NTM-AS1Q6ZSK4 140 aa6.16□□□□□ -1.42
USB1-216ENST00000624720 A0A087X002 238 aa6.15□□□□□ -1.42
USB1-216ENST00000624720 PROK1P58294 105 aa6.15□□□□□ -1.42
USB1-216ENST00000624720 IGHV3-53P01767 116 aa6.15□□□□□ -1.43
USB1-216ENST00000624720 LINC00315P59091 139 aa6.15□□□□□ -1.43
USB1-216ENST00000624720 ODF3L2Q3SX64 289 aa6.14□□□□□ -1.43
USB1-216ENST00000624720 Q9BRP9 147 aa6.14□□□□□ -1.43
USB1-216ENST00000624720 IGKV4-1P06312 121 aa6.14□□□□□ -1.43
USB1-216ENST00000624720 RNASE3P12724 160 aaKnown RBP6.14□□□□□ -1.43
USB1-216ENST00000624720 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
USB1-216ENST00000624720 ROMO1P60602 79 aa6.13□□□□□ -1.43
USB1-216ENST00000624720 Q8N9L7 120 aa6.13□□□□□ -1.43
USB1-216ENST00000624720 NBEAL1Q6ZS30 2694 aa6.13□□□□□ -1.43
USB1-216ENST00000624720 MGAM2Q2M2H8 2515 aa6.13□□□□□ -1.43
USB1-216ENST00000624720 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
USB1-216ENST00000624720 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
USB1-216ENST00000624720 DEFB4AO15263 64 aa6.12□□□□□ -1.43
USB1-216ENST00000624720 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
USB1-216ENST00000624720 IGLV5-39A0A0G2JS06 123 aa6.11□□□□□ -1.43
USB1-216ENST00000624720 SPINK7P58062 85 aa6.11□□□□□ -1.43
USB1-216ENST00000624720 FAM104AQ969W3 186 aa6.1□□□□□ -1.43
USB1-216ENST00000624720 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
USB1-216ENST00000624720 RTL8CO15255 209 aa6.09□□□□□ -1.43
USB1-216ENST00000624720 IGLV5-45A0A087WSX0 123 aa6.08□□□□□ -1.44
USB1-216ENST00000624720 A0A1W2PNM2 257 aa6.08□□□□□ -1.44
USB1-216ENST00000624720 J3QL48 77 aa6.08□□□□□ -1.44
USB1-216ENST00000624720 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
USB1-216ENST00000624720 TRGV1A0A0A0MS02 117 aa6.08□□□□□ -1.44
USB1-216ENST00000624720 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
USB1-216ENST00000624720 TRGV2A0A075B6R0 118 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 LINC00612Q8N6U2 182 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 KRTAP24-1Q3LI83 254 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 Q6ZR54 194 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 MUC7Q8TAX7 377 aa6.07□□□□□ -1.44
USB1-216ENST00000624720 NOP10Q9NPE3 64 aaKnown RBP6.07□□□□□ -1.44
USB1-216ENST00000624720 ETDCA0A1B0GVM5 59 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 M0QY20 66 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 DEFB130BP0DP73 79 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 DEFB130AP0DP74 79 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 COX7B2Q8TF08 81 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
USB1-216ENST00000624720 INSP01308 110 aa6.05□□□□□ -1.44
USB1-216ENST00000624720 Q6ZSN1 163 aa6.05□□□□□ -1.44
USB1-216ENST00000624720 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
USB1-216ENST00000624720 DEFB135Q30KP9 77 aa6.04□□□□□ -1.44
USB1-216ENST00000624720 CCL18P55774 89 aa6.04□□□□□ -1.44
USB1-216ENST00000624720 A0A096LPF7 62 aa6.04□□□□□ -1.44
USB1-216ENST00000624720 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
USB1-216ENST00000624720 SPAG11BQ08648 103 aa6.04□□□□□ -1.44
USB1-216ENST00000624720 SPAG11AQ6PDA7 123 aa6.03□□□□□ -1.44
USB1-216ENST00000624720 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
USB1-216ENST00000624720 GIG44P09565 113 aaPredicted RBP6.02□□□□□ -1.45
USB1-216ENST00000624720 LINC00158P58513 81 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 TRBV6-4A0A1B0GX49 114 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 HTN3P15516 51 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 COX6A2Q02221 97 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 LINC00242Q5T6M2 205 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 ST20-AS1Q8NBB2 130 aa6.02□□□□□ -1.45
USB1-216ENST00000624720 CNBPP62633 177 aaKnown RBP6.01□□□□□ -1.45
USB1-216ENST00000624720 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
USB1-216ENST00000624720 COA5Q86WW8 74 aa6□□□□□ -1.45
USB1-216ENST00000624720 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
USB1-216ENST00000624720 IGKV3OR2-268A0A0C4DH90 116 aa6□□□□□ -1.45
USB1-216ENST00000624720 CDK2AP2O75956 126 aa6□□□□□ -1.45
USB1-216ENST00000624720 REG3GQ6UW15 175 aa6□□□□□ -1.45
USB1-216ENST00000624720 TENM3Q9P273 2699 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms