RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 UBE2WQ96B02 151 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 IGLV10-54A0A075B6I4 117 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 A0A1B0GWB2 263 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 A0A1W2PPM0 123 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 IBA57-AS1B1ANH7 110 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 F8WDY8 70 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 K7EP13 123 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 COX6CP09669 75 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 PSMB2P49721 201 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 LINC00158P58513 81 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 SPAG11BQ08648 103 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 ESRGQ1W209 222 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 WFDC10BQ8IUB3 73 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 MUSTN1Q8IVN3 82 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 MUC7Q8TAX7 377 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 ZNF625Q96I27 306 aaPredicted RBP3.03□□□□□ -1.92
VPS29-212ENST00000621131 PPDPFQ9H3Y8 114 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 PRO1854Q9UHT4 67 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 ERG28Q9UKR5 140 aa3.03□□□□□ -1.92
VPS29-212ENST00000621131 KMT2AQ03164 3969 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 HUWE1Q7Z6Z7 4374 aaKnown RBP3.02□□□□□ -1.93
VPS29-212ENST00000621131 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 LOC107984156A0A0G2JMH3 177 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 A4D1N5 150 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 K7ERJ3 54 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 NPC2P61916 151 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 COX17Q14061 63 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 ARL17AQ8IVW1 177 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 LINC00308Q8TCZ7 52 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 SPCS1Q9Y6A9 102 aa3.02□□□□□ -1.93
VPS29-212ENST00000621131 DMBT1Q9UGM3 2413 aaPredicted RBP3.02□□□□□ -1.93
VPS29-212ENST00000621131 TRBV20-1A0A075B6N2 111 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 TRAV13-2A0A0B4J235 113 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 A0A0U1RRA0 63 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 LCE6AA0A183 80 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 K7EP34 96 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 PFN2P35080 140 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 TTC32Q5I0X7 151 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 ENHOQ6UWT2 76 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 UPK3BQ9BT76 320 aa3.01□□□□□ -1.93
VPS29-212ENST00000621131 TRBV30A0A0K0K1B3 111 aa3□□□□□ -1.93
VPS29-212ENST00000621131 C3orf84H3BNL1 204 aa3□□□□□ -1.93
VPS29-212ENST00000621131 H7C2G1 150 aa3□□□□□ -1.93
VPS29-212ENST00000621131 SNCGO76070 127 aa3□□□□□ -1.93
VPS29-212ENST00000621131 TSPAN13O95857 204 aa3□□□□□ -1.93
VPS29-212ENST00000621131 RPL13AP40429 203 aaKnown RBP3□□□□□ -1.93
VPS29-212ENST00000621131 KRTAP10-10P60014 251 aa3□□□□□ -1.93
VPS29-212ENST00000621131 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
VPS29-212ENST00000621131 DAND5Q8N907 189 aa3□□□□□ -1.93
VPS29-212ENST00000621131 CAMK2N2Q96S95 79 aa3□□□□□ -1.93
VPS29-212ENST00000621131 SND1-IT1Q9HBX3 110 aa3□□□□□ -1.93
VPS29-212ENST00000621131 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
VPS29-212ENST00000621131 CBY1Q9Y3M2 126 aa3□□□□□ -1.93
VPS29-212ENST00000621131 LINC00588Q9Y4M8 146 aa3□□□□□ -1.93
VPS29-212ENST00000621131 GVQW2A0A096LPI5 108 aaPredicted RBP2.99□□□□□ -1.93
VPS29-212ENST00000621131 PSCAO43653 123 aa2.99□□□□□ -1.93
VPS29-212ENST00000621131 ATXN8Q156A1 80 aa2.99□□□□□ -1.93
VPS29-212ENST00000621131 NAA38Q9BRA0 125 aaKnown RBP2.99□□□□□ -1.93
VPS29-212ENST00000621131 SRRM2Q9UQ35 2752 aaKnown RBP2.99□□□□□ -1.93
VPS29-212ENST00000621131 F8W1H4 67 aa2.98□□□□□ -1.93
VPS29-212ENST00000621131 KIAA0087Q14695 138 aa2.98□□□□□ -1.93
VPS29-212ENST00000621131 C2orf82Q6UX34 121 aa2.98□□□□□ -1.93
VPS29-212ENST00000621131 OR13C6PQ8NH95 151 aa2.98□□□□□ -1.93
VPS29-212ENST00000621131 APLNQ9ULZ1 77 aa2.98□□□□□ -1.93
VPS29-212ENST00000621131 HSPG2P98160 4391 aa2.98□□□□□ -1.93
VPS29-212ENST00000621131 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 J3QR89 54 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 NDUFC2O95298 119 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 SYCNQ0VAF6 134 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 PRR4Q16378 134 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 S100A7L2Q5SY68 101 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 CARD19Q96LW7 228 aa2.97□□□□□ -1.93
VPS29-212ENST00000621131 DYNC1H1Q14204 4646 aaKnown RBP2.96□□□□□ -1.94
VPS29-212ENST00000621131 H0YGX0 51 aa2.96□□□□□ -1.94
VPS29-212ENST00000621131 DNAL4O96015 105 aa2.96□□□□□ -1.94
VPS29-212ENST00000621131 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
VPS29-212ENST00000621131 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
VPS29-212ENST00000621131 TMEM126AQ9H061 195 aa2.96□□□□□ -1.94
VPS29-212ENST00000621131 TRBV10-2A0A0K0K1G8 114 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 LOC107984640A0A0U1RRK4 108 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 NDUFC2-KCTD14E9PQ53 114 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 H3BMG7 143 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 K7ERU9 68 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 NCR3O14931 201 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 TCL1BO95988 128 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 RPL28P46779 137 aaKnown RBP2.95□□□□□ -1.94
VPS29-212ENST00000621131 RPL18AQ02543 176 aaKnown RBP2.95□□□□□ -1.94
VPS29-212ENST00000621131 CASC10Q5T4H9 136 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 SOSTDC1Q6X4U4 206 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 Q6ZRU5 148 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 C6orf223Q8N319 242 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 NKAPP1Q8N9T2 125 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 C6orf48Q9UBA6 75 aa2.95□□□□□ -1.94
VPS29-212ENST00000621131 NBDYA0A0U1RRE5 68 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 C9JAW5 83 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 LST1O00453 97 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 SLC25A20O43772 301 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 TRACP01848 142 aa2.94□□□□□ -1.94
VPS29-212ENST00000621131 LINC01620Q4KN68 170 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms