RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 RGPD2P0DJD1 1756 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 KIF14Q15058 1648 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 CSPG4Q6UVK1 2322 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 SETXQ7Z333 2677 aaKnown RBP0.08□□□□□ -2.4
TARDBP-220ENST00000618606 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 RGPD1P0DJD0 1748 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 EP300Q09472 2414 aaPredicted RBP0.07□□□□□ -2.4
TARDBP-220ENST00000618606 RB1CC1Q8TDY2 1594 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 TNXBP22105 4242 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 PKD1L1Q8TDX9 2849 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 RIF1Q5UIP0 2472 aaKnown RBP0.07□□□□□ -2.4
TARDBP-220ENST00000618606 BPTFQ12830 3046 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 TMEM131LA2VDJ0 1609 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 ALKQ9UM73 1620 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 LOC730098B7Z3J9 87 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 HEPN1Q6WQI6 88 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 WDFY4Q6ZS81 3184 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 LPAP08519 4548 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 HSPG2P98160 4391 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 RYR3Q15413 4870 aa0.07□□□□□ -2.4
TARDBP-220ENST00000618606 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
TARDBP-220ENST00000618606 COL7A1Q02388 2944 aa0.06□□□□□ -2.4
TARDBP-220ENST00000618606 KANTRA0A1W2PQU2 76 aa0.06□□□□□ -2.4
TARDBP-220ENST00000618606 ACYP1P07311 99 aa0.06□□□□□ -2.4
TARDBP-220ENST00000618606 ST20Q9HBF5 79 aa0.06□□□□□ -2.4
TARDBP-220ENST00000618606 EPG5Q9HCE0 2579 aa0.06□□□□□ -2.4
TARDBP-220ENST00000618606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.05□□□□□ -2.44e-11■■■■■ 47.8
TARDBP-220ENST00000618606 KNL1Q8NG31 2342 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 ZNF831Q5JPB2 1677 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 BSNQ9UPA5 3926 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 PKD1L3Q7Z443 1732 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 ADIRFQ15847 76 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 SPG11Q96JI7 2443 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 USP32Q8NFA0 1604 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 CELSR3Q9NYQ7 3312 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 MGAM2Q2M2H8 2515 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 LRRK2Q5S007 2527 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
TARDBP-220ENST00000618606 CLIP1P30622 1438 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 CCDC18Q5T9S5 1454 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 PPLO60437 1756 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 H3BUT2 72 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 SPRR2DP22532 72 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 S100A13Q99584 98 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 UNC80Q8N2C7 3258 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 DCHS1Q96JQ0 3298 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 TNRC18O15417 2968 aaPredicted RBP0.04□□□□□ -2.4
TARDBP-220ENST00000618606 NBEAL1Q6ZS30 2694 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 USH2AO75445 5202 aa0.04□□□□□ -2.4
TARDBP-220ENST00000618606 MKI67P46013 3256 aaKnown RBP0.04□□□□□ -2.4
TARDBP-220ENST00000618606 KIF20BQ96Q89 1820 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 NCOA2Q15596 1464 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 VCANP13611 3396 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 DIP2BQ9P265 1576 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 NBASA2RRP1 2371 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 NBEAL2Q6ZNJ1 2754 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 EP400Q96L91 3159 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 MAP3K4Q9Y6R4 1608 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 ALMS1Q8TCU4 4167 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 CCL22O00626 93 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 NDUFA3O95167 84 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 IFI6P09912 130 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 WFDC13Q8IUB5 93 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 CDKN2A-AS1Q9UH64 79 aa0.03□□□□□ -2.4
TARDBP-220ENST00000618606 USP9YO00507 2555 aaPredicted RBP0.03□□□□□ -2.4
TARDBP-220ENST00000618606 USP9XQ93008 2570 aaPredicted RBP0.03□□□□□ -2.4
TARDBP-220ENST00000618606 FLNBO75369 2602 aaKnown RBP0.03□□□□□ -2.4
TARDBP-220ENST00000618606 SRCAPQ6ZRS2 3230 aa0.03□□□□□ -2.41
TARDBP-220ENST00000618606 TENM2Q9NT68 2774 aa0.03□□□□□ -2.41
TARDBP-220ENST00000618606 PDE4DIPQ5VU43 2346 aa0.03□□□□□ -2.41
TARDBP-220ENST00000618606 LRP2P98164 4655 aa0.03□□□□□ -2.41
TARDBP-220ENST00000618606 TRANK1O15050 2925 aa0.03□□□□□ -2.41
TARDBP-220ENST00000618606 ERVK-7P63135 1459 aa0.03□□□□□ -2.41
TARDBP-220ENST00000618606 CSMD1Q96PZ7 3565 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 DNAH9Q9NYC9 4486 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 CEP290O15078 2479 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 BVES-AS1Q5T3Y7 98 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 ARHGAP35Q9NRY4 1499 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 ACACAQ13085 2346 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
TARDBP-220ENST00000618606 QSER1Q2KHR3 1735 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 COL14A1Q05707 1796 aaKnown RBP0.01□□□□□ -2.41
TARDBP-220ENST00000618606 GCN1Q92616 2671 aaKnown RBP0.01□□□□□ -2.41
TARDBP-220ENST00000618606 UBR3Q6ZT12 1888 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 DCHS2Q6V1P9 2916 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 MT4P47944 62 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 RPL38P63173 70 aaKnown RBP0.01□□□□□ -2.41
TARDBP-220ENST00000618606 PRKDCP78527 4128 aaKnown RBP0.01□□□□□ -2.41
TARDBP-220ENST00000618606 LRRC9Q6ZRR7 1453 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 FAT1Q14517 4588 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.01□□□□□ -2.41
TARDBP-220ENST00000618606 LRP1BQ9NZR2 4599 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 PCNTO95613 3336 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 SUPT6HQ7KZ85 1726 aaKnown RBP0.01□□□□□ -2.41
TARDBP-220ENST00000618606 KMT2AQ03164 3969 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 PCNX1Q96RV3 2341 aa0.01□□□□□ -2.41
TARDBP-220ENST00000618606 ITPR1Q14643 2758 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 AKAP13Q12802 2813 aa0□□□□□ -2.41
TARDBP-220ENST00000618606 UMAD1C9J7I0 102 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms