RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
CCL3-206ENST00000614051 IGLV6-57P01721 117 aa9.69□□□□□ -0.86
CCL3-206ENST00000614051 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
CCL3-206ENST00000614051 A0A1B0GWB2 263 aa9.68□□□□□ -0.86
CCL3-206ENST00000614051 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
CCL3-206ENST00000614051 UBE2BP63146 152 aa9.68□□□□□ -0.86
CCL3-206ENST00000614051 SNHG12Q9BXW3 62 aa9.68□□□□□ -0.86
CCL3-206ENST00000614051 H7C2G1 150 aa9.67□□□□□ -0.86
CCL3-206ENST00000614051 TMEM126AQ9H061 195 aa9.66□□□□□ -0.86
CCL3-206ENST00000614051 PRO1854Q9UHT4 67 aa9.66□□□□□ -0.86
CCL3-206ENST00000614051 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
CCL3-206ENST00000614051 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
CCL3-206ENST00000614051 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
CCL3-206ENST00000614051 RYR1P21817 5038 aa9.64□□□□□ -0.87
CCL3-206ENST00000614051 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
CCL3-206ENST00000614051 XP32Q5T750 250 aa9.63□□□□□ -0.87
CCL3-206ENST00000614051 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
CCL3-206ENST00000614051 PRYO14603 147 aa9.61□□□□□ -0.87
CCL3-206ENST00000614051 Q1RN00 199 aa9.61□□□□□ -0.87
CCL3-206ENST00000614051 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
CCL3-206ENST00000614051 TSPAN13O95857 204 aa9.6□□□□□ -0.87
CCL3-206ENST00000614051 HSPG2P98160 4391 aa9.6□□□□□ -0.87
CCL3-206ENST00000614051 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
CCL3-206ENST00000614051 ZNF73O43830 326 aaPredicted RBP9.59□□□□□ -0.87
CCL3-206ENST00000614051 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
CCL3-206ENST00000614051 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
CCL3-206ENST00000614051 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
CCL3-206ENST00000614051 Q8N1X5 172 aa9.58□□□□□ -0.88
CCL3-206ENST00000614051 FAT1Q14517 4588 aa9.58□□□□□ -0.88
CCL3-206ENST00000614051 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
CCL3-206ENST00000614051 SPRR1AP35321 89 aa9.57□□□□□ -0.88
CCL3-206ENST00000614051 RPL28P46779 137 aaKnown RBP9.57□□□□□ -0.88
CCL3-206ENST00000614051 DIRC1Q969H9 104 aa9.57□□□□□ -0.88
CCL3-206ENST00000614051 TAX1BP3O14907 124 aa9.56□□□□□ -0.88
CCL3-206ENST00000614051 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
CCL3-206ENST00000614051 TRIAP1O43715 76 aa9.55□□□□□ -0.88
CCL3-206ENST00000614051 BCE1O60756 84 aa9.55□□□□□ -0.88
CCL3-206ENST00000614051 COL5A1-AS1Q5SY13 56 aa9.55□□□□□ -0.88
CCL3-206ENST00000614051 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
CCL3-206ENST00000614051 CBY1Q9Y3M2 126 aa9.55□□□□□ -0.88
CCL3-206ENST00000614051 B5MCH6 92 aa9.54□□□□□ -0.88
CCL3-206ENST00000614051 PSMB2P49721 201 aa9.54□□□□□ -0.88
CCL3-206ENST00000614051 RPL37AP61513 92 aaKnown RBP9.54□□□□□ -0.88
CCL3-206ENST00000614051 PRLHP81277 87 aa9.54□□□□□ -0.88
CCL3-206ENST00000614051 VPS13BQ7Z7G8 4022 aa9.54□□□□□ -0.88
CCL3-206ENST00000614051 COX7BP24311 80 aa9.52□□□□□ -0.89
CCL3-206ENST00000614051 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
CCL3-206ENST00000614051 H3BUT2 72 aa9.51□□□□□ -0.89
CCL3-206ENST00000614051 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
CCL3-206ENST00000614051 UBE2AP49459 152 aa9.51□□□□□ -0.89
CCL3-206ENST00000614051 ELOF1P60002 83 aaKnown RBP9.51□□□□□ -0.89
CCL3-206ENST00000614051 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
CCL3-206ENST00000614051 ABCA13Q86UQ4 5058 aa9.51□□□□□ -0.89
CCL3-206ENST00000614051 Q6ZRX8 168 aa9.5□□□□□ -0.89
CCL3-206ENST00000614051 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
CCL3-206ENST00000614051 Q9BRP9 147 aa9.5□□□□□ -0.89
CCL3-206ENST00000614051 TRBV7-6A0A0J9YX20 115 aa9.49□□□□□ -0.89
CCL3-206ENST00000614051 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
CCL3-206ENST00000614051 VAMP3Q15836 100 aa9.49□□□□□ -0.89
CCL3-206ENST00000614051 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
CCL3-206ENST00000614051 SCGB1C2P0DMR2 95 aa9.47□□□□□ -0.89
CCL3-206ENST00000614051 Q5VSD8 79 aa9.47□□□□□ -0.89
CCL3-206ENST00000614051 FAM218AQ96MZ4 157 aa9.47□□□□□ -0.89
CCL3-206ENST00000614051 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
CCL3-206ENST00000614051 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
CCL3-206ENST00000614051 H0Y9J4 135 aa9.46□□□□□ -0.9
CCL3-206ENST00000614051 ZNF861PO60384 105 aa9.46□□□□□ -0.9
CCL3-206ENST00000614051 ERC2-IT1O76042 136 aa9.46□□□□□ -0.9
CCL3-206ENST00000614051 COX6CP09669 75 aa9.46□□□□□ -0.9
CCL3-206ENST00000614051 LINC00575Q6W349 94 aa9.46□□□□□ -0.9
CCL3-206ENST00000614051 H0YGX0 51 aa9.45□□□□□ -0.9
CCL3-206ENST00000614051 A0A1W2PPM0 123 aa9.44□□□□□ -0.9
CCL3-206ENST00000614051 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
CCL3-206ENST00000614051 DHRS4-AS1Q9P1J3 65 aa9.42□□□□□ -0.9
CCL3-206ENST00000614051 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
CCL3-206ENST00000614051 TCL1BO95988 128 aa9.41□□□□□ -0.9
CCL3-206ENST00000614051 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
CCL3-206ENST00000614051 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.9
CCL3-206ENST00000614051 SLC25A20O43772 301 aa9.4□□□□□ -0.91
CCL3-206ENST00000614051 FABP2P12104 132 aa9.4□□□□□ -0.91
CCL3-206ENST00000614051 LST1O00453 97 aa9.38□□□□□ -0.91
CCL3-206ENST00000614051 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
CCL3-206ENST00000614051 PKHD1L1Q86WI1 4243 aa9.38□□□□□ -0.91
CCL3-206ENST00000614051 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
CCL3-206ENST00000614051 Q6ZQY7 126 aa9.36□□□□□ -0.91
CCL3-206ENST00000614051 ATXN8Q156A1 80 aa9.35□□□□□ -0.91
CCL3-206ENST00000614051 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
CCL3-206ENST00000614051 SPCS1Q9Y6A9 102 aa9.35□□□□□ -0.91
CCL3-206ENST00000614051 TRBV20-1A0A075B6N2 111 aa9.34□□□□□ -0.91
CCL3-206ENST00000614051 A0A1B0GX51 115 aa9.34□□□□□ -0.91
CCL3-206ENST00000614051 SNCGO76070 127 aa9.34□□□□□ -0.91
CCL3-206ENST00000614051 TRACP01848 142 aa9.34□□□□□ -0.91
CCL3-206ENST00000614051 ANAPC11Q9NYG5 84 aa9.34□□□□□ -0.91
CCL3-206ENST00000614051 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
CCL3-206ENST00000614051 GAGE2AQ6NT46 116 aa9.33□□□□□ -0.92
CCL3-206ENST00000614051 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.33□□□□□ -0.92
CCL3-206ENST00000614051 SPRR4Q96PI1 79 aa9.33□□□□□ -0.92
CCL3-206ENST00000614051 H3BMG7 143 aa9.32□□□□□ -0.92
CCL3-206ENST00000614051 DNAL4O96015 105 aa9.32□□□□□ -0.92
CCL3-206ENST00000614051 A0A1B0GV90 55 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms