RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 CSMD2Q7Z408 3487 aa4.6□□□□□ -1.67
CDKAL1-204ENST00000613575 MXRA5Q9NR99 2828 aa4.6□□□□□ -1.67
CDKAL1-204ENST00000613575 ZANQ9Y493 2812 aa4.6□□□□□ -1.67
CDKAL1-204ENST00000613575 CENPEQ02224 2701 aa4.59□□□□□ -1.67
CDKAL1-204ENST00000613575 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
CDKAL1-204ENST00000613575 NIPBLQ6KC79 2804 aaeCLIP4.59□□□□□ -1.67
CDKAL1-204ENST00000613575 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
CDKAL1-204ENST00000613575 BPY2O14599 106 aa4.59□□□□□ -1.67
CDKAL1-204ENST00000613575 PKD1L1Q8TDX9 2849 aa4.59□□□□□ -1.68
CDKAL1-204ENST00000613575 RYR3Q15413 4870 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 IGHV3OR16-12A0A075B7B8 117 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 IGLV5-39A0A0G2JS06 123 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 RPL36AP83881 106 aaKnown RBP4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 C9orf129Q5T035 196 aaKnown RBP4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 NTM-AS1Q6ZSK4 140 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 Q75L30 129 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 LINC00337Q8N6G1 96 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 RPL36ALQ969Q0 106 aaKnown RBP4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 CRYBG3Q68DQ2 2970 aa4.58□□□□□ -1.68
CDKAL1-204ENST00000613575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 TRBV6-4A0A1B0GX49 114 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 IGKV2-29A2NJV5 120 aaPredicted RBP4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 K7EQD1 137 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 PDE6GP18545 87 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 HAMPP81172 84 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 ASB16-AS1Q495Z4 193 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 LINC00242Q5T6M2 205 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 Q6ZTI0 123 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 C16orf74Q96GX8 76 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 CDC42SE2Q9NRR3 84 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 A0A087WYN8 130 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 IGHV3-38A0A0C4DH36 116 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 A6NED7 52 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 CDKN2A-AS1Q9UH64 79 aa4.57□□□□□ -1.68
CDKAL1-204ENST00000613575 APCP25054 2843 aa4.56□□□□□ -1.68
CDKAL1-204ENST00000613575 LECT2O14960 151 aa4.56□□□□□ -1.68
CDKAL1-204ENST00000613575 COX6A2Q02221 97 aa4.56□□□□□ -1.68
CDKAL1-204ENST00000613575 C9orf116Q5BN46 136 aaPredicted RBP4.56□□□□□ -1.68
CDKAL1-204ENST00000613575 LINC00167Q96N53 147 aa4.56□□□□□ -1.68
CDKAL1-204ENST00000613575 LOC110117498A0A087WWA1 95 aa4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 LRCOL1A6NCL2 159 aa4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 RNASE13Q5GAN3 156 aaKnown RBP4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 LINC00612Q8N6U2 182 aa4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 NOP10Q9NPE3 64 aaKnown RBP4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 ANK3Q12955 4377 aaKnown RBP4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 ZNF469Q96JG9 3925 aaPredicted RBP4.55□□□□□ -1.68
CDKAL1-204ENST00000613575 A0A087X002 238 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 C3orf84H3BNL1 204 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 C6orf99Q4VX62 202 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 A8MU10 97 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 H3BQ85 93 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
CDKAL1-204ENST00000613575 SMIM1B2RUZ4 78 aa4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 NDUFB1O75438 58 aa4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 KRTAP10-3P60369 221 aa4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 ZNF706Q9Y5V0 76 aaPredicted RBP4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 TLN2Q9Y4G6 2542 aa4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 SONP18583 2426 aaKnown RBP4.53□□□□□ -1.68
CDKAL1-204ENST00000613575 TRGV2A0A075B6R0 118 aa4.52□□□□□ -1.69
CDKAL1-204ENST00000613575 CASC2Q6XLA1 102 aa4.52□□□□□ -1.69
CDKAL1-204ENST00000613575 Q6ZQT0 140 aa4.52□□□□□ -1.69
CDKAL1-204ENST00000613575 SMIM11BQ8TCY0 68 aa4.52□□□□□ -1.69
CDKAL1-204ENST00000613575 HIGD2AQ9BW72 106 aa4.52□□□□□ -1.69
CDKAL1-204ENST00000613575 LOC101927531A0A1B0GV80 90 aa4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 MOBPQ13875 183 aa4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 SCXQ7RTU7 201 aa4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 WFDC10AQ9H1F0 79 aa4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 TRGV4A0A0C4DH28 118 aa4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 LCE6AA0A183 80 aa4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
CDKAL1-204ENST00000613575 KMT2CQ8NEZ4 4911 aaKnown RBP4.5□□□□□ -1.69
CDKAL1-204ENST00000613575 A0A1B0GUV1 79 aa4.5□□□□□ -1.69
CDKAL1-204ENST00000613575 LY6G6DO95868 133 aa4.5□□□□□ -1.69
CDKAL1-204ENST00000613575 PRR3P79522 188 aaKnown RBP4.49□□□□□ -1.69
CDKAL1-204ENST00000613575 Q9BRP9 147 aa4.49□□□□□ -1.69
CDKAL1-204ENST00000613575 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
CDKAL1-204ENST00000613575 WNK1Q9H4A3 2382 aa4.49□□□□□ -1.69
CDKAL1-204ENST00000613575 IGHV6-1A0A0B4J1U7 121 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 SMR3AQ99954 134 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 SND1-IT1Q9HBX3 110 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 ACANP16112 2415 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 PRO0255Q9UI72 69 aa4.48□□□□□ -1.69
CDKAL1-204ENST00000613575 LINC00959A0A1B0GUT2 108 aa4.47□□□□□ -1.69
CDKAL1-204ENST00000613575 Q8N814 137 aa4.47□□□□□ -1.69
CDKAL1-204ENST00000613575 COX7B2Q8TF08 81 aa4.47□□□□□ -1.69
CDKAL1-204ENST00000613575 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
CDKAL1-204ENST00000613575 COL6A5A8TX70 2615 aa4.47□□□□□ -1.69
CDKAL1-204ENST00000613575 HIVEP2P31629 2446 aa4.46□□□□□ -1.7
CDKAL1-204ENST00000613575 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
CDKAL1-204ENST00000613575 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
CDKAL1-204ENST00000613575 B9D2Q9BPU9 175 aa4.46□□□□□ -1.7
CDKAL1-204ENST00000613575 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
CDKAL1-204ENST00000613575 IGKV2-28A0A075B6P5 120 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms