RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 LINC00612Q8N6U2 182 aa2.15□□□□□ -2.07
NEB-218ENST00000603639 TLN1Q9Y490 2541 aaKnown RBP2.15□□□□□ -2.07
NEB-218ENST00000603639 TTC28Q96AY4 2481 aa2.15□□□□□ -2.07
NEB-218ENST00000603639 RIF1Q5UIP0 2472 aaKnown RBP2.15□□□□□ -2.07
NEB-218ENST00000603639 LCE6AA0A183 80 aa2.15□□□□□ -2.07
NEB-218ENST00000603639 CEP295Q9C0D2 2601 aa2.15□□□□□ -2.07
NEB-218ENST00000603639 ARHGAP32A7KAX9 2087 aa2.15□□□□□ -2.07
NEB-218ENST00000603639 LY6G6CO95867 125 aa2.15□□□□□ -2.07
NEB-218ENST00000603639 FREM1Q5H8C1 2179 aa2.14□□□□□ -2.07
NEB-218ENST00000603639 A0A1W2PNN7 141 aa2.14□□□□□ -2.07
NEB-218ENST00000603639 Q6ZR54 194 aa2.14□□□□□ -2.07
NEB-218ENST00000603639 RPS29P62273 56 aaKnown RBP2.14□□□□□ -2.07
NEB-218ENST00000603639 ZNF407Q9C0G0 2248 aa2.14□□□□□ -2.07
NEB-218ENST00000603639 SRCAPQ6ZRS2 3230 aa2.14□□□□□ -2.07
NEB-218ENST00000603639 ZCCHC13Q8WW36 166 aaKnown RBP2.13□□□□□ -2.07
NEB-218ENST00000603639 PRR14LQ5THK1 2151 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 SPRR1AP35321 89 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 COL6A6A6NMZ7 2263 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 SPINK7P58062 85 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 KRTAP11-1Q8IUC1 163 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 NBASA2RRP1 2371 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 C10orf99Q6UWK7 81 aa2.13□□□□□ -2.07
NEB-218ENST00000603639 ADM2Q7Z4H4 148 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 RTL8CO15255 209 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 PTPRQQ9UMZ3 2332 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 A0A0G2JQZ4 141 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 KRTAP29-1A8MX34 341 aaPredicted RBP2.12□□□□□ -2.07
NEB-218ENST00000603639 FAM229BQ4G0N7 80 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 A6NN06 94 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 Q5W150 140 aa2.12□□□□□ -2.07
NEB-218ENST00000603639 KRTAP25-1Q3LHN0 102 aa2.11□□□□□ -2.07
NEB-218ENST00000603639 TET2Q6N021 2002 aaPredicted RBP2.11□□□□□ -2.07
NEB-218ENST00000603639 EP400Q96L91 3159 aa2.11□□□□□ -2.07
NEB-218ENST00000603639 AGRNO00468 2067 aa2.11□□□□□ -2.07
NEB-218ENST00000603639 FAM208BQ5VWN6 2430 aa2.11□□□□□ -2.07
NEB-218ENST00000603639 PCNX1Q96RV3 2341 aa2.11□□□□□ -2.07
NEB-218ENST00000603639 ANAPC11Q9NYG5 84 aa2.11□□□□□ -2.07
NEB-218ENST00000603639 TLN2Q9Y4G6 2542 aa2.1□□□□□ -2.07
NEB-218ENST00000603639 SPG11Q96JI7 2443 aa2.1□□□□□ -2.07
NEB-218ENST00000603639 LINC00483Q53H64 154 aa2.1□□□□□ -2.07
NEB-218ENST00000603639 KMT2BQ9UMN6 2715 aaPredicted RBP2.1□□□□□ -2.07
NEB-218ENST00000603639 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
NEB-218ENST00000603639 TRANK1O15050 2925 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 PRRC2AP48634 2157 aaKnown RBP2.09□□□□□ -2.07
NEB-218ENST00000603639 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 LAMA2P24043 3122 aaKnown RBP2.09□□□□□ -2.07
NEB-218ENST00000603639 LRRK2Q5S007 2527 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 HIVEP3Q5T1R4 2406 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 DNAH12Q6ZR08 3092 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 ROS1P08922 2347 aa2.09□□□□□ -2.07
NEB-218ENST00000603639 H1FX-AS1Q4G0G2 97 aa2.09□□□□□ -2.08
NEB-218ENST00000603639 KRTAP26-1Q6PEX3 210 aa2.09□□□□□ -2.08
NEB-218ENST00000603639 A0A096LNT2 108 aa2.08□□□□□ -2.08
NEB-218ENST00000603639 PSORS1C2Q9UIG4 136 aa2.08□□□□□ -2.08
NEB-218ENST00000603639 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
NEB-218ENST00000603639 ZNF462Q96JM2 2506 aa2.08□□□□□ -2.08
NEB-218ENST00000603639 NCOR2Q9Y618 2525 aa2.08□□□□□ -2.08
NEB-218ENST00000603639 SORL1Q92673 2214 aa2.08□□□□□ -2.08
NEB-218ENST00000603639 PKDREJQ9NTG1 2253 aa2.07□□□□□ -2.08
NEB-218ENST00000603639 ABCA2Q9BZC7 2435 aa2.07□□□□□ -2.08
NEB-218ENST00000603639 MMP24-AS1A0A0U1RRL7 71 aa2.07□□□□□ -2.08
NEB-218ENST00000603639 MAP1AP78559 2803 aaPredicted RBP2.07□□□□□ -2.08
NEB-218ENST00000603639 CENPFP49454 3210 aa2.07□□□□□ -2.08
NEB-218ENST00000603639 PRAC1Q96KF2 57 aa2.07□□□□□ -2.08
NEB-218ENST00000603639 C2CD3Q4AC94 2353 aa2.06□□□□□ -2.08
NEB-218ENST00000603639 CCDC168Q8NDH2 2452 aa2.06□□□□□ -2.08
NEB-218ENST00000603639 CEP350Q5VT06 3117 aa2.06□□□□□ -2.08
NEB-218ENST00000603639 TECTAO75443 2155 aa2.06□□□□□ -2.08
NEB-218ENST00000603639 PLAC8Q9NZF1 115 aa2.06□□□□□ -2.08
NEB-218ENST00000603639 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
NEB-218ENST00000603639 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
NEB-218ENST00000603639 NOTCH2Q04721 2471 aa2.05□□□□□ -2.08
NEB-218ENST00000603639 FAM168BA1KXE4 195 aa2.05□□□□□ -2.08
NEB-218ENST00000603639 PKD1L2Q7Z442 2459 aa2.05□□□□□ -2.08
NEB-218ENST00000603639 A8MUU9 505 aa2.04□□□□□ -2.08
NEB-218ENST00000603639 GOLGB1Q14789 3259 aaKnown RBP2.04□□□□□ -2.08
NEB-218ENST00000603639 OXTP01178 125 aa2.04□□□□□ -2.08
NEB-218ENST00000603639 ZNF292O60281 2723 aa2.04□□□□□ -2.08
NEB-218ENST00000603639 CSPG4Q6UVK1 2322 aa2.04□□□□□ -2.08
NEB-218ENST00000603639 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.04□□□□□ -2.08
NEB-218ENST00000603639 USP9YO00507 2555 aaPredicted RBP2.03□□□□□ -2.08
NEB-218ENST00000603639 PTPN13Q12923 2485 aa2.03□□□□□ -2.08
NEB-218ENST00000603639 C20orf166-AS1Q96NR2 134 aa2.03□□□□□ -2.08
NEB-218ENST00000603639 SETD2Q9BYW2 2564 aaPredicted RBP2.03□□□□□ -2.08
NEB-218ENST00000603639 A0A087WTM6 91 aa2.03□□□□□ -2.08
NEB-218ENST00000603639 A0A0D9SG42 100 aa2.02□□□□□ -2.09
NEB-218ENST00000603639 KRTAP4-16G5E9R7 235 aaPredicted RBP2.02□□□□□ -2.09
NEB-218ENST00000603639 GCN1Q92616 2671 aaKnown RBP2.02□□□□□ -2.09
NEB-218ENST00000603639 ZFHX2Q9C0A1 2572 aaPredicted RBP2.01□□□□□ -2.09
NEB-218ENST00000603639 MUC4Q99102 2169 aa2.01□□□□□ -2.09
NEB-218ENST00000603639 CENPEQ02224 2701 aa2.01□□□□□ -2.09
NEB-218ENST00000603639 SPTBN4Q9H254 2564 aa2.01□□□□□ -2.09
NEB-218ENST00000603639 Q6ZSA8 131 aa2□□□□□ -2.09
NEB-218ENST00000603639 WWC2-AS2Q96NR7 200 aa2□□□□□ -2.09
NEB-218ENST00000603639 MTORP42345 2549 aa2□□□□□ -2.09
NEB-218ENST00000603639 USP9XQ93008 2570 aaPredicted RBP2□□□□□ -2.09
NEB-218ENST00000603639 CHD8Q9HCK8 2581 aa2□□□□□ -2.09
NEB-218ENST00000603639 PCNTO95613 3336 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms