RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 Q8NDZ9 215 aa9.76□□□□□ -0.85
SHKBP1-215ENST00000597649 RPL13AP40429 203 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-215ENST00000597649 HIST1H4GQ99525 98 aa9.75□□□□□ -0.85
SHKBP1-215ENST00000597649 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-215ENST00000597649 TSPAN13O95857 204 aa9.74□□□□□ -0.85
SHKBP1-215ENST00000597649 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
SHKBP1-215ENST00000597649 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
SHKBP1-215ENST00000597649 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
SHKBP1-215ENST00000597649 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
SHKBP1-215ENST00000597649 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
SHKBP1-215ENST00000597649 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
SHKBP1-215ENST00000597649 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
SHKBP1-215ENST00000597649 LINC00518Q8N0U6 118 aa9.71□□□□□ -0.86
SHKBP1-215ENST00000597649 DDTP30046 118 aa9.7□□□□□ -0.86
SHKBP1-215ENST00000597649 OR13C6PQ8NH95 151 aa9.7□□□□□ -0.86
SHKBP1-215ENST00000597649 ZNF861PO60384 105 aa9.69□□□□□ -0.86
SHKBP1-215ENST00000597649 C2orf91Q6ZV80 131 aa9.69□□□□□ -0.86
SHKBP1-215ENST00000597649 C12orf57Q99622 126 aa9.69□□□□□ -0.86
SHKBP1-215ENST00000597649 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
SHKBP1-215ENST00000597649 TRBV10-3A0A0K0K1G6 114 aa9.68□□□□□ -0.86
SHKBP1-215ENST00000597649 A0A087X002 238 aa9.67□□□□□ -0.86
SHKBP1-215ENST00000597649 TAL2Q16559 108 aa9.67□□□□□ -0.86
SHKBP1-215ENST00000597649 CBY1Q9Y3M2 126 aa9.67□□□□□ -0.86
SHKBP1-215ENST00000597649 A4D1N5 150 aa9.66□□□□□ -0.86
SHKBP1-215ENST00000597649 A6NDN8 102 aa9.65□□□□□ -0.86
SHKBP1-215ENST00000597649 PRYO14603 147 aa9.65□□□□□ -0.86
SHKBP1-215ENST00000597649 BCE1O60756 84 aa9.65□□□□□ -0.86
SHKBP1-215ENST00000597649 TMEM126AQ9H061 195 aa9.65□□□□□ -0.86
SHKBP1-215ENST00000597649 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
SHKBP1-215ENST00000597649 IGLV6-57P01721 117 aa9.64□□□□□ -0.87
SHKBP1-215ENST00000597649 CEND1Q8N111 149 aa9.64□□□□□ -0.87
SHKBP1-215ENST00000597649 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
SHKBP1-215ENST00000597649 TSTD3H0UI37 97 aa9.63□□□□□ -0.87
SHKBP1-215ENST00000597649 UBE2AP49459 152 aa9.63□□□□□ -0.87
SHKBP1-215ENST00000597649 HSD52Q0P140 79 aa9.63□□□□□ -0.87
SHKBP1-215ENST00000597649 FAM19A1Q7Z5A9 133 aa9.63□□□□□ -0.87
SHKBP1-215ENST00000597649 LINC00337Q8N6G1 96 aa9.63□□□□□ -0.87
SHKBP1-215ENST00000597649 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
SHKBP1-215ENST00000597649 TMEM238LA0A1B0GVL6 79 aa9.61□□□□□ -0.87
SHKBP1-215ENST00000597649 ETDCA0A1B0GVM5 59 aa9.61□□□□□ -0.87
SHKBP1-215ENST00000597649 A6NJY4 79 aa9.61□□□□□ -0.87
SHKBP1-215ENST00000597649 ANAPC11Q9NYG5 84 aa9.61□□□□□ -0.87
SHKBP1-215ENST00000597649 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-215ENST00000597649 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
SHKBP1-215ENST00000597649 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-215ENST00000597649 RAB37Q96AX2 223 aa9.59□□□□□ -0.87
SHKBP1-215ENST00000597649 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
SHKBP1-215ENST00000597649 ZNF73O43830 326 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-215ENST00000597649 CRYGAP11844 174 aa9.58□□□□□ -0.88
SHKBP1-215ENST00000597649 KRTAP13-2Q52LG2 175 aa9.58□□□□□ -0.88
SHKBP1-215ENST00000597649 SPRR1AP35321 89 aa9.57□□□□□ -0.88
SHKBP1-215ENST00000597649 FXYD2P54710 66 aa9.56□□□□□ -0.88
SHKBP1-215ENST00000597649 PRLHP81277 87 aa9.56□□□□□ -0.88
SHKBP1-215ENST00000597649 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
SHKBP1-215ENST00000597649 CFC1P0CG37 223 aa9.55□□□□□ -0.88
SHKBP1-215ENST00000597649 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
SHKBP1-215ENST00000597649 CTAG1AP78358 180 aa9.54□□□□□ -0.88
SHKBP1-215ENST00000597649 B5MCH6 92 aa9.53□□□□□ -0.88
SHKBP1-215ENST00000597649 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
SHKBP1-215ENST00000597649 HIGD2AQ9BW72 106 aa9.53□□□□□ -0.88
SHKBP1-215ENST00000597649 NHP2Q9NX24 153 aaKnown RBP9.53□□□□□ -0.88
SHKBP1-215ENST00000597649 KRTAP4-16G5E9R7 235 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-215ENST00000597649 H7C2G1 150 aa9.52□□□□□ -0.89
SHKBP1-215ENST00000597649 M0R143 59 aa9.52□□□□□ -0.89
SHKBP1-215ENST00000597649 SMIM11BQ8TCY0 68 aa9.52□□□□□ -0.89
SHKBP1-215ENST00000597649 COX7BP24311 80 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 VAMP3Q15836 100 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 Q1RN00 199 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 Q6ZRX8 168 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 CDIP1Q9H305 208 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 PRO1854Q9UHT4 67 aa9.51□□□□□ -0.89
SHKBP1-215ENST00000597649 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
SHKBP1-215ENST00000597649 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
SHKBP1-215ENST00000597649 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
SHKBP1-215ENST00000597649 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
SHKBP1-215ENST00000597649 A0A1B0GWB2 263 aa9.48□□□□□ -0.89
SHKBP1-215ENST00000597649 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
SHKBP1-215ENST00000597649 SMCR5Q8TEV8 140 aa9.48□□□□□ -0.89
SHKBP1-215ENST00000597649 PCP4L1A6NKN8 68 aa9.46□□□□□ -0.9
SHKBP1-215ENST00000597649 ELOF1P60002 83 aaKnown RBP9.46□□□□□ -0.9
SHKBP1-215ENST00000597649 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.9
SHKBP1-215ENST00000597649 K7ERJ3 54 aa9.45□□□□□ -0.9
SHKBP1-215ENST00000597649 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
SHKBP1-215ENST00000597649 Q9BRP9 147 aa9.44□□□□□ -0.9
SHKBP1-215ENST00000597649 ZNF706Q9Y5V0 76 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-215ENST00000597649 SLC25A20O43772 301 aa9.43□□□□□ -0.9
SHKBP1-215ENST00000597649 BATFQ16520 125 aa9.43□□□□□ -0.9
SHKBP1-215ENST00000597649 PSMB2P49721 201 aa9.42□□□□□ -0.9
SHKBP1-215ENST00000597649 ERC2-IT1O76042 136 aa9.41□□□□□ -0.9
SHKBP1-215ENST00000597649 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-215ENST00000597649 H0YGX0 51 aa9.39□□□□□ -0.91
SHKBP1-215ENST00000597649 SNCGO76070 127 aa9.39□□□□□ -0.91
SHKBP1-215ENST00000597649 SPRR4Q96PI1 79 aa9.39□□□□□ -0.91
SHKBP1-215ENST00000597649 COX6CP09669 75 aa9.38□□□□□ -0.91
SHKBP1-215ENST00000597649 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
SHKBP1-215ENST00000597649 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
SHKBP1-215ENST00000597649 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
SHKBP1-215ENST00000597649 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms