RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	PRKDC	P78527	4128 aa	Known RBP	0.87	□□□□□ -2.27
ATP9B-223	ENST00000590608	TG	P01266	2768 aa		0.87	□□□□□ -2.27
ATP9B-223	ENST00000590608	MYH8	P13535	1937 aa		0.87	□□□□□ -2.27
ATP9B-223	ENST00000590608	VPS13C	Q709C8	3753 aa		0.86	□□□□□ -2.27
ATP9B-223	ENST00000590608	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.86	□□□□□ -2.27
ATP9B-223	ENST00000590608	CYP4F30P	Q9H0H9	118 aa		0.86	□□□□□ -2.27
ATP9B-223	ENST00000590608	DPH3P1	Q9H4G8	78 aa		0.86	□□□□□ -2.27
ATP9B-223	ENST00000590608	PLAC8	Q9NZF1	115 aa		0.86	□□□□□ -2.27
ATP9B-223	ENST00000590608	DCHS2	Q6V1P9	2916 aa		0.86	□□□□□ -2.27
ATP9B-223	ENST00000590608	TRBV7-3	A0A075B6L6	115 aa		0.85	□□□□□ -2.27
ATP9B-223	ENST00000590608	SSSCA1	O60232	199 aa		0.85	□□□□□ -2.27
ATP9B-223	ENST00000590608	TFF3	Q07654	80 aa		0.85	□□□□□ -2.27
ATP9B-223	ENST00000590608	CFAP126	Q5VTH2	177 aa		0.85	□□□□□ -2.27
ATP9B-223	ENST00000590608	LENEP	Q9Y5L5	61 aa		0.85	□□□□□ -2.27
ATP9B-223	ENST00000590608		V9GYH0	126 aa		0.85	□□□□□ -2.27
ATP9B-223	ENST00000590608	KIAA1109	Q2LD37	5005 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	PDCD11	Q14690	1871 aa	Known RBP	0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	MYH4	Q9Y623	1939 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	CTXND1	A0A1B0GTU2	59 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	FAM24A	A6NFZ4	105 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	PRH1	P02810	166 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	KRTAP2-3	P0C7H8	128 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	DEFB133	Q30KQ1	61 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	FDCSP	Q8NFU4	85 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	KRTAP2-4	Q9BYR9	128 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	KRTAP2-1	Q9BYU5	128 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	NPVF	Q9HCQ7	196 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	NDUFA4L2	Q9NRX3	87 aa		0.84	□□□□□ -2.27
ATP9B-223	ENST00000590608	AKAP6	Q13023	2319 aa		0.84	□□□□□ -2.28
ATP9B-223	ENST00000590608	HERC1	Q15751	4861 aa		0.84	□□□□□ -2.28
ATP9B-223	ENST00000590608	TRRAP	Q9Y4A5	3859 aa		0.84	□□□□□ -2.28
ATP9B-223	ENST00000590608	DNAH1	Q9P2D7	4330 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	ABCA13	Q86UQ4	5058 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	MAP1A	P78559	2803 aa	Predicted RBP	0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	C20orf202	A1L168	122 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	PIN1P1	O15428	100 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	IFITM1	P13164	125 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	S100P	P25815	95 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	WHAMMP3	Q1A5X7	153 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	TENM3	Q9P273	2699 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	VWF	P04275	2813 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	USF3	Q68DE3	2245 aa		0.83	□□□□□ -2.28
ATP9B-223	ENST00000590608	TENM2	Q9NT68	2774 aa		0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	LCE6A	A0A183	80 aa		0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	UBE2L5P	A0A1B0GUS4	154 aa		0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	UBE2L3	P68036	154 aa	Known RBP	0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	MYOZ3	Q8TDC0	251 aa		0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	MGST2	Q99735	147 aa		0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.82	□□□□□ -2.28
ATP9B-223	ENST00000590608	CACNA1C	Q13936	2221 aa		0.81	□□□□□ -2.28
ATP9B-223	ENST00000590608	ZAN	Q9Y493	2812 aa		0.81	□□□□□ -2.28
ATP9B-223	ENST00000590608		Q5VV11	94 aa		0.81	□□□□□ -2.28
ATP9B-223	ENST00000590608	GTF2H5	Q6ZYL4	71 aa		0.81	□□□□□ -2.28
ATP9B-223	ENST00000590608	DYNLRB1	Q9NP97	96 aa		0.81	□□□□□ -2.28
ATP9B-223	ENST00000590608	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.81	□□□□□ -2.28
ATP9B-223	ENST00000590608	MYO7B	Q6PIF6	2116 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608		A0A0D9SFI3	127 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608	STATH	P02808	62 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608	GNG11	P61952	73 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608	SSBP3-AS1	Q7Z2R9	100 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608	UBE2DNL	Q8IWF7	75 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608	DNAH11	Q96DT5	4516 aa		0.8	□□□□□ -2.28
ATP9B-223	ENST00000590608	DNAH9	Q9NYC9	4486 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	STAB2	Q8WWQ8	2551 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	ATP6V1G2-DDX39B	F2Z307	99 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	HMGN4	O00479	90 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	SPINK8	P0C7L1	97 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	FAM213B	Q8TBF2	198 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	C14orf144	Q96I85	54 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	COL7A1	Q02388	2944 aa		0.79	□□□□□ -2.28
ATP9B-223	ENST00000590608	PLCE1	Q9P212	2302 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	PLEC	Q15149	4684 aa	Known RBP	0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	HMCN2	Q8NDA2	5059 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	DYNC1H1	Q14204	4646 aa	Known RBP	0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	ZNF815P	A8K554	130 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	DEFB108A	A8MXU0	73 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	CHKB-CPT1B	H3BT56	60 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	SNCA	P37840	140 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	DCD	P81605	110 aa	Known RBP	0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	HSD52	Q0P140	79 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	C12orf57	Q99622	126 aa		0.78	□□□□□ -2.28
ATP9B-223	ENST00000590608	DNAJC13	O75165	2243 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	IGLC7	A0M8Q6	106 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608		F8VRH5	84 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	UQCRH	P07919	91 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	UBA52	P62987	128 aa	Known RBP	0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	COX6A2	Q02221	97 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	AMELX	Q99217	191 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	FAIM	Q9NVQ4	179 aa		0.77	□□□□□ -2.29
ATP9B-223	ENST00000590608	CMYA5	Q8N3K9	4069 aa		0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	SNRPF	P62306	86 aa	Known RBP	0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	COX14	Q96I36	57 aa		0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	CGREF1	Q99674	301 aa		0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	MUC2	Q02817	5179 aa		0.76	□□□□□ -2.29
ATP9B-223	ENST00000590608	STARD9	Q9P2P6	4700 aa		0.75	□□□□□ -2.29
ATP9B-223	ENST00000590608	HSPG2	P98160	4391 aa		0.75	□□□□□ -2.29
ATP9B-223	ENST00000590608	WNK2	Q9Y3S1	2297 aa		0.75	□□□□□ -2.29
ATP9B-223	ENST00000590608	TNC	P24821	2201 aa		0.75	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms