RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 LBHQ53QV2 105 aaPredicted RBP6.37□□□□□ -1.39
SDF2-208ENST00000589788 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
SDF2-208ENST00000589788 Q6ZVH6 145 aa6.37□□□□□ -1.39
SDF2-208ENST00000589788 SPANXDQ9BXN6 97 aa6.37□□□□□ -1.39
SDF2-208ENST00000589788 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
SDF2-208ENST00000589788 C22orf24Q9Y442 160 aa6.37□□□□□ -1.39
SDF2-208ENST00000589788 A0A0U1RRA0 63 aa6.36□□□□□ -1.39
SDF2-208ENST00000589788 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
SDF2-208ENST00000589788 DDTP30046 118 aa6.36□□□□□ -1.39
SDF2-208ENST00000589788 MIR7-3HGQ8N6C7 128 aa6.36□□□□□ -1.39
SDF2-208ENST00000589788 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
SDF2-208ENST00000589788 TAL2Q16559 108 aa6.35□□□□□ -1.39
SDF2-208ENST00000589788 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
SDF2-208ENST00000589788 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
SDF2-208ENST00000589788 DAND5Q8N907 189 aa6.35□□□□□ -1.39
SDF2-208ENST00000589788 NKAPP1Q8N9T2 125 aa6.35□□□□□ -1.39
SDF2-208ENST00000589788 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
SDF2-208ENST00000589788 IFITM1P13164 125 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 HSD52Q0P140 79 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 COPS9Q8WXC6 57 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 DIRC1Q969H9 104 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 SND1-IT1Q9HBX3 110 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 MYCBP2O75592 4640 aa6.34□□□□□ -1.39
SDF2-208ENST00000589788 LOC107984156A0A0G2JMH3 177 aa6.33□□□□□ -1.4
SDF2-208ENST00000589788 ARL17AQ8IVW1 177 aa6.33□□□□□ -1.4
SDF2-208ENST00000589788 MPLKIPQ8TAP9 179 aa6.33□□□□□ -1.4
SDF2-208ENST00000589788 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
SDF2-208ENST00000589788 LINC01600Q96MT4 127 aa6.33□□□□□ -1.4
SDF2-208ENST00000589788 IGLV5-37A0A075B6J1 123 aa6.32□□□□□ -1.4
SDF2-208ENST00000589788 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
SDF2-208ENST00000589788 CTAG1AP78358 180 aa6.32□□□□□ -1.4
SDF2-208ENST00000589788 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
SDF2-208ENST00000589788 SOSTDC1Q6X4U4 206 aa6.32□□□□□ -1.4
SDF2-208ENST00000589788 LINC00167Q96N53 147 aa6.32□□□□□ -1.4
SDF2-208ENST00000589788 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
SDF2-208ENST00000589788 NPC2P61916 151 aa6.31□□□□□ -1.4
SDF2-208ENST00000589788 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
SDF2-208ENST00000589788 CEND1Q8N111 149 aa6.31□□□□□ -1.4
SDF2-208ENST00000589788 PCP4L1A6NKN8 68 aa6.3□□□□□ -1.4
SDF2-208ENST00000589788 H0Y9J4 135 aa6.3□□□□□ -1.4
SDF2-208ENST00000589788 M0R143 59 aa6.29□□□□□ -1.4
SDF2-208ENST00000589788 NDUFC2O95298 119 aa6.29□□□□□ -1.4
SDF2-208ENST00000589788 VPREB1P12018 145 aa6.29□□□□□ -1.4
SDF2-208ENST00000589788 A4D1N5 150 aa6.28□□□□□ -1.4
SDF2-208ENST00000589788 ZNF861PO60384 105 aa6.28□□□□□ -1.4
SDF2-208ENST00000589788 BCE1O60756 84 aa6.28□□□□□ -1.4
SDF2-208ENST00000589788 BVES-AS1Q5T3Y7 98 aa6.28□□□□□ -1.4
SDF2-208ENST00000589788 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
SDF2-208ENST00000589788 IGKV2-28A0A075B6P5 120 aa6.27□□□□□ -1.41
SDF2-208ENST00000589788 IGKV2D-28P01615 120 aa6.27□□□□□ -1.41
SDF2-208ENST00000589788 RPL28P46779 137 aaKnown RBP6.27□□□□□ -1.41
SDF2-208ENST00000589788 HINT1P49773 126 aaPredicted RBP6.27□□□□□ -1.41
SDF2-208ENST00000589788 FXYD2P54710 66 aa6.27□□□□□ -1.41
SDF2-208ENST00000589788 Q8NDZ9 215 aa6.26□□□□□ -1.41
SDF2-208ENST00000589788 IGLV1-50A0A075B6I6 118 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 TRBV10-2A0A0K0K1G8 114 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 UBE2AP49459 152 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
SDF2-208ENST00000589788 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 A0A1B0GWB2 263 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 M0R378 163 aa6.25□□□□□ -1.41
SDF2-208ENST00000589788 A6NDN8 102 aa6.24□□□□□ -1.41
SDF2-208ENST00000589788 CFC1BP0CG36 223 aa6.24□□□□□ -1.41
SDF2-208ENST00000589788 CFC1P0CG37 223 aa6.24□□□□□ -1.41
SDF2-208ENST00000589788 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
SDF2-208ENST00000589788 TMEM126AQ9H061 195 aa6.24□□□□□ -1.41
SDF2-208ENST00000589788 NHP2Q9NX24 153 aaKnown RBP6.24□□□□□ -1.41
SDF2-208ENST00000589788 NCR3O14931 201 aa6.23□□□□□ -1.41
SDF2-208ENST00000589788 BATFQ16520 125 aa6.23□□□□□ -1.41
SDF2-208ENST00000589788 FAM19A1Q7Z5A9 133 aa6.23□□□□□ -1.41
SDF2-208ENST00000589788 LINC00337Q8N6G1 96 aa6.23□□□□□ -1.41
SDF2-208ENST00000589788 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
SDF2-208ENST00000589788 HERC1Q15751 4861 aa6.22□□□□□ -1.41
SDF2-208ENST00000589788 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
SDF2-208ENST00000589788 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
SDF2-208ENST00000589788 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
SDF2-208ENST00000589788 K7ERJ3 54 aa6.21□□□□□ -1.42
SDF2-208ENST00000589788 RPL13AP40429 203 aaKnown RBP6.21□□□□□ -1.42
SDF2-208ENST00000589788 S100A7L2Q5SY68 101 aa6.21□□□□□ -1.42
SDF2-208ENST00000589788 PRO1854Q9UHT4 67 aa6.21□□□□□ -1.42
SDF2-208ENST00000589788 IGLV6-57P01721 117 aa6.2□□□□□ -1.42
SDF2-208ENST00000589788 PRLHP81277 87 aa6.2□□□□□ -1.42
SDF2-208ENST00000589788 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
SDF2-208ENST00000589788 OR13C6PQ8NH95 151 aa6.2□□□□□ -1.42
SDF2-208ENST00000589788 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
SDF2-208ENST00000589788 TRBV10-3A0A0K0K1G6 114 aa6.19□□□□□ -1.42
SDF2-208ENST00000589788 CBY1Q9Y3M2 126 aa6.18□□□□□ -1.42
SDF2-208ENST00000589788 ETDCA0A1B0GVM5 59 aa6.17□□□□□ -1.42
SDF2-208ENST00000589788 CRYGAP11844 174 aa6.17□□□□□ -1.42
SDF2-208ENST00000589788 COL5A1-AS1Q5SY13 56 aa6.17□□□□□ -1.42
SDF2-208ENST00000589788 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
SDF2-208ENST00000589788 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
SDF2-208ENST00000589788 TRAV23DV6A0A075B6W5 121 aa6.16□□□□□ -1.42
SDF2-208ENST00000589788 H7C2G1 150 aa6.15□□□□□ -1.43
SDF2-208ENST00000589788 TSPAN13O95857 204 aa6.15□□□□□ -1.43
SDF2-208ENST00000589788 Q1RN00 199 aa6.15□□□□□ -1.43
SDF2-208ENST00000589788 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.43
SDF2-208ENST00000589788 A0A087X002 238 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms