RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TRRAPQ9Y4A5 3859 aa4.88□□□□□ -1.63
ZNF540-206ENST00000589117 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
ZNF540-206ENST00000589117 Q6ZRP5 223 aa4.88□□□□□ -1.63
ZNF540-206ENST00000589117 MRAPQ8TCY5 172 aa4.87□□□□□ -1.63
ZNF540-206ENST00000589117 TLX1NBP0CAT3 122 aa4.86□□□□□ -1.63
ZNF540-206ENST00000589117 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
ZNF540-206ENST00000589117 CRYGAP11844 174 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 TM2D3Q9BRN9 247 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 KCNQ1DNQ9H478 68 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 F8P00451 2351 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 TRBV7-4A0A0J9YYF1 115 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 CXCL6P80162 114 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 HAMPP81172 84 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 UPK3BQ9BT76 320 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 DHRS4-AS1Q9P1J3 65 aa4.85□□□□□ -1.63
ZNF540-206ENST00000589117 A0A087WVE0 104 aa4.84□□□□□ -1.63
ZNF540-206ENST00000589117 BCE1O60756 84 aa4.84□□□□□ -1.63
ZNF540-206ENST00000589117 LINC00588Q9Y4M8 146 aa4.84□□□□□ -1.63
ZNF540-206ENST00000589117 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.64
ZNF540-206ENST00000589117 Q6ZVQ6 151 aa4.83□□□□□ -1.64
ZNF540-206ENST00000589117 LINC01547P58512 204 aaPredicted RBP4.83□□□□□ -1.64
ZNF540-206ENST00000589117 ETDCA0A1B0GVM5 59 aa4.82□□□□□ -1.64
ZNF540-206ENST00000589117 A0A1B0GW54 56 aa4.82□□□□□ -1.64
ZNF540-206ENST00000589117 IGLV5-37A0A075B6J1 123 aa4.81□□□□□ -1.64
ZNF540-206ENST00000589117 LOC107984640A0A0U1RRK4 108 aa4.81□□□□□ -1.64
ZNF540-206ENST00000589117 FAM19A1Q7Z5A9 133 aa4.81□□□□□ -1.64
ZNF540-206ENST00000589117 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
ZNF540-206ENST00000589117 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
ZNF540-206ENST00000589117 K7EIL1 84 aa4.8□□□□□ -1.64
ZNF540-206ENST00000589117 Q6ZRX8 168 aa4.8□□□□□ -1.64
ZNF540-206ENST00000589117 FUSP35637 526 aaKnown RBP eCLIP4.79□□□□□ -1.64
ZNF540-206ENST00000589117 NREPQ16612 68 aa4.79□□□□□ -1.64
ZNF540-206ENST00000589117 MRPL55Q7Z7F7 128 aaKnown RBP4.79□□□□□ -1.64
ZNF540-206ENST00000589117 DEFB105AQ8NG35 78 aa4.79□□□□□ -1.64
ZNF540-206ENST00000589117 PRB2P02812 416 aaPredicted RBP4.79□□□□□ -1.64
ZNF540-206ENST00000589117 TMEM258P61165 79 aa4.79□□□□□ -1.64
ZNF540-206ENST00000589117 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
ZNF540-206ENST00000589117 TRAV7A0A075B6U4 112 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 PSCAO43653 123 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 STAB1Q9NY15 2570 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 PKD1L1Q8TDX9 2849 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 M0R2N4 97 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 SPRR1AP35321 89 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 C14orf177Q52M58 125 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 PKIGQ9Y2B9 76 aa4.78□□□□□ -1.64
ZNF540-206ENST00000589117 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
ZNF540-206ENST00000589117 UBE2DNLQ8IWF7 75 aa4.77□□□□□ -1.65
ZNF540-206ENST00000589117 Q8N377 158 aa4.77□□□□□ -1.65
ZNF540-206ENST00000589117 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
ZNF540-206ENST00000589117 FLNBO75369 2602 aaKnown RBP4.77□□□□□ -1.65
ZNF540-206ENST00000589117 MAST4O15021 2626 aa4.76□□□□□ -1.65
ZNF540-206ENST00000589117 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
ZNF540-206ENST00000589117 UBE2BP63146 152 aa4.76□□□□□ -1.65
ZNF540-206ENST00000589117 REG3GQ6UW15 175 aa4.76□□□□□ -1.65
ZNF540-206ENST00000589117 FAM19A5Q7Z5A7 132 aaPredicted RBP4.76□□□□□ -1.65
ZNF540-206ENST00000589117 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
ZNF540-206ENST00000589117 ANK2Q01484 3957 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 FAM168BA1KXE4 195 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 F8WEM9 126 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 J3KT08 172 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 BPY2O14599 106 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 Q8N1X5 172 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 TENM3Q9P273 2699 aa4.75□□□□□ -1.65
ZNF540-206ENST00000589117 IGLV5-52A0A0A0MRZ9 124 aa4.74□□□□□ -1.65
ZNF540-206ENST00000589117 C16orf90A8MZG2 172 aa4.74□□□□□ -1.65
ZNF540-206ENST00000589117 CNBPP62633 177 aaKnown RBP4.74□□□□□ -1.65
ZNF540-206ENST00000589117 C1orf137Q5JT78 98 aa4.74□□□□□ -1.65
ZNF540-206ENST00000589117 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
ZNF540-206ENST00000589117 Q9BRP9 147 aa4.74□□□□□ -1.65
ZNF540-206ENST00000589117 C3orf84H3BNL1 204 aa4.73□□□□□ -1.65
ZNF540-206ENST00000589117 SCXQ7RTU7 201 aa4.73□□□□□ -1.65
ZNF540-206ENST00000589117 NDUFC1O43677 76 aa4.72□□□□□ -1.65
ZNF540-206ENST00000589117 NOTCH1P46531 2555 aa4.72□□□□□ -1.65
ZNF540-206ENST00000589117 COL6A5A8TX70 2615 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 BAHCC1Q9P281 2608 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 KRTAP10-2P60368 255 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 KLKP1Q107X0 134 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 Q8NBF4 154 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 LINC00474Q9P2X8 69 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 IGKV2-24A0A0C4DH68 120 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 KRTAP7-1Q8IUC3 87 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 APLNQ9ULZ1 77 aa4.71□□□□□ -1.66
ZNF540-206ENST00000589117 NUPR2A6NF83 97 aa4.7□□□□□ -1.66
ZNF540-206ENST00000589117 ERC2-IT1O76042 136 aa4.7□□□□□ -1.66
ZNF540-206ENST00000589117 ST20-AS1Q8NBB2 130 aa4.7□□□□□ -1.66
ZNF540-206ENST00000589117 DPH3Q96FX2 82 aa4.7□□□□□ -1.66
ZNF540-206ENST00000589117 SPRR4Q96PI1 79 aa4.7□□□□□ -1.66
ZNF540-206ENST00000589117 A0A096LNI7 61 aa4.69□□□□□ -1.66
ZNF540-206ENST00000589117 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
ZNF540-206ENST00000589117 IGKV4-1P06312 121 aa4.69□□□□□ -1.66
ZNF540-206ENST00000589117 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
ZNF540-206ENST00000589117 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
ZNF540-206ENST00000589117 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
ZNF540-206ENST00000589117 CMYA5Q8N3K9 4069 aa4.68□□□□□ -1.66
ZNF540-206ENST00000589117 NBEAL1Q6ZS30 2694 aa4.68□□□□□ -1.66
ZNF540-206ENST00000589117 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
ZNF540-206ENST00000589117 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms