RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 VPS13BQ7Z7G8 4022 aa14.07□□□□□ -0.16
ACTN4-210ENST00000588618 ZNF73O43830 326 aaPredicted RBP14.07□□□□□ -0.16
ACTN4-210ENST00000588618 DIRC1Q969H9 104 aa14.06□□□□□ -0.16
ACTN4-210ENST00000588618 KIAA1109Q2LD37 5005 aa14.05□□□□□ -0.16
ACTN4-210ENST00000588618 TSPAN13O95857 204 aa14.04□□□□□ -0.16
ACTN4-210ENST00000588618 C6orf99Q4VX62 202 aa14.04□□□□□ -0.16
ACTN4-210ENST00000588618 COL5A1-AS1Q5SY13 56 aa14.04□□□□□ -0.16
ACTN4-210ENST00000588618 PSORS1C2Q9UIG4 136 aa14.04□□□□□ -0.16
ACTN4-210ENST00000588618 SMR3BP02814 79 aaPredicted RBP14.03□□□□□ -0.16
ACTN4-210ENST00000588618 PSMB2P49721 201 aa14.03□□□□□ -0.16
ACTN4-210ENST00000588618 ETDCA0A1B0GVM5 59 aa14.02□□□□□ -0.16
ACTN4-210ENST00000588618 TAX1BP3O14907 124 aa14.02□□□□□ -0.16
ACTN4-210ENST00000588618 RPL28P46779 137 aaKnown RBP14.02□□□□□ -0.16
ACTN4-210ENST00000588618 C1orf137Q5JT78 98 aa14.01□□□□□ -0.17
ACTN4-210ENST00000588618 LINC00528Q8N1L1 170 aa14.01□□□□□ -0.17
ACTN4-210ENST00000588618 VAMP3Q15836 100 aa14.01□□□□□ -0.17
ACTN4-210ENST00000588618 NAA38Q9BRA0 125 aaKnown RBP14.01□□□□□ -0.17
ACTN4-210ENST00000588618 BCE1O60756 84 aa13.99□□□□□ -0.17
ACTN4-210ENST00000588618 SPRR1AP35321 89 aa13.99□□□□□ -0.17
ACTN4-210ENST00000588618 FAM19A1Q7Z5A9 133 aa13.99□□□□□ -0.17
ACTN4-210ENST00000588618 COX6CP09669 75 aa13.98□□□□□ -0.17
ACTN4-210ENST00000588618 UBE2AP49459 152 aa13.97□□□□□ -0.17
ACTN4-210ENST00000588618 KRTAP4-16G5E9R7 235 aaPredicted RBP13.96□□□□□ -0.17
ACTN4-210ENST00000588618 RPL37AP61513 92 aaKnown RBP13.96□□□□□ -0.17
ACTN4-210ENST00000588618 TRIAP1O43715 76 aa13.95□□□□□ -0.18
ACTN4-210ENST00000588618 COX7BP24311 80 aa13.95□□□□□ -0.18
ACTN4-210ENST00000588618 TRBV7-6A0A0J9YX20 115 aa13.95□□□□□ -0.18
ACTN4-210ENST00000588618 SCGB1C2P0DMR2 95 aa13.95□□□□□ -0.18
ACTN4-210ENST00000588618 FAM229AH3BQW9 127 aa13.93□□□□□ -0.18
ACTN4-210ENST00000588618 B5MCH6 92 aa13.93□□□□□ -0.18
ACTN4-210ENST00000588618 H3BUT2 72 aa13.93□□□□□ -0.18
ACTN4-210ENST00000588618 ELOF1P60002 83 aaKnown RBP13.93□□□□□ -0.18
ACTN4-210ENST00000588618 PRLHP81277 87 aa13.93□□□□□ -0.18
ACTN4-210ENST00000588618 Q6ZRX8 168 aa13.93□□□□□ -0.18
ACTN4-210ENST00000588618 BIRC6Q9NR09 4857 aa13.92□□□□□ -0.18
ACTN4-210ENST00000588618 C9orf118A6NHY6 69 aa13.92□□□□□ -0.18
ACTN4-210ENST00000588618 SRRM2Q9UQ35 2752 aaKnown RBP13.91□□□□□ -0.18
ACTN4-210ENST00000588618 H0YGX0 51 aa13.91□□□□□ -0.18
ACTN4-210ENST00000588618 IGLV7-43P04211 117 aa13.9□□□□□ -0.18
ACTN4-210ENST00000588618 LYRM7Q5U5X0 104 aa13.9□□□□□ -0.18
ACTN4-210ENST00000588618 SLC25A20O43772 301 aa13.89□□□□□ -0.19
ACTN4-210ENST00000588618 H0Y9J4 135 aa13.88□□□□□ -0.19
ACTN4-210ENST00000588618 PLA2G1BP04054 148 aaKnown RBP13.88□□□□□ -0.19
ACTN4-210ENST00000588618 SNCGO76070 127 aa13.87□□□□□ -0.19
ACTN4-210ENST00000588618 HIGD2AQ9BW72 106 aa13.87□□□□□ -0.19
ACTN4-210ENST00000588618 ZNF861PO60384 105 aa13.86□□□□□ -0.19
ACTN4-210ENST00000588618 DHRS4-AS1Q9P1J3 65 aa13.86□□□□□ -0.19
ACTN4-210ENST00000588618 FAM218AQ96MZ4 157 aa13.84□□□□□ -0.19
ACTN4-210ENST00000588618 Q5VSD8 79 aa13.84□□□□□ -0.19
ACTN4-210ENST00000588618 KRTAP13-1Q8IUC0 172 aa13.84□□□□□ -0.19
ACTN4-210ENST00000588618 KRTAP17-1Q9BYP8 105 aa13.84□□□□□ -0.19
ACTN4-210ENST00000588618 A0A1W2PPM0 123 aa13.83□□□□□ -0.2
ACTN4-210ENST00000588618 INAFM2P0DMQ5 153 aa13.83□□□□□ -0.2
ACTN4-210ENST00000588618 FABP2P12104 132 aa13.83□□□□□ -0.2
ACTN4-210ENST00000588618 LINC00575Q6W349 94 aa13.83□□□□□ -0.2
ACTN4-210ENST00000588618 CLEC2BQ92478 149 aa13.83□□□□□ -0.2
ACTN4-210ENST00000588618 Q9BRP9 147 aa13.83□□□□□ -0.2
ACTN4-210ENST00000588618 hADV29S1A0JD25 119 aa13.81□□□□□ -0.2
ACTN4-210ENST00000588618 SMCR5Q8TEV8 140 aa13.8□□□□□ -0.2
ACTN4-210ENST00000588618 Q8N1X5 172 aa13.79□□□□□ -0.2
ACTN4-210ENST00000588618 KRTAP10-4P60372 401 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-210ENST00000588618 A0A1B0GX51 115 aa13.77□□□□□ -0.21
ACTN4-210ENST00000588618 DNAL4O96015 105 aa13.77□□□□□ -0.21
ACTN4-210ENST00000588618 TRBV20-1A0A075B6N2 111 aa13.76□□□□□ -0.21
ACTN4-210ENST00000588618 TCL1BO95988 128 aa13.76□□□□□ -0.21
ACTN4-210ENST00000588618 ATXN8Q156A1 80 aa13.76□□□□□ -0.21
ACTN4-210ENST00000588618 ERC2-IT1O76042 136 aa13.76□□□□□ -0.21
ACTN4-210ENST00000588618 LST1O00453 97 aa13.74□□□□□ -0.21
ACTN4-210ENST00000588618 PKHD1L1Q86WI1 4243 aa13.74□□□□□ -0.21
ACTN4-210ENST00000588618 SPINK6Q6UWN8 80 aa13.73□□□□□ -0.21
ACTN4-210ENST00000588618 SPCS1Q9Y6A9 102 aa13.73□□□□□ -0.21
ACTN4-210ENST00000588618 ZNF706Q9Y5V0 76 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-210ENST00000588618 TRACP01848 142 aa13.71□□□□□ -0.21
ACTN4-210ENST00000588618 Q6ZQY7 126 aa13.71□□□□□ -0.21
ACTN4-210ENST00000588618 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.7□□□□□ -0.22
ACTN4-210ENST00000588618 HERC2O95714 4834 aa13.68□□□□□ -0.22
ACTN4-210ENST00000588618 A0A1B0GV90 55 aa13.68□□□□□ -0.22
ACTN4-210ENST00000588618 ST20-AS1Q8NBB2 130 aa13.67□□□□□ -0.22
ACTN4-210ENST00000588618 DEFB105AQ8NG35 78 aa13.67□□□□□ -0.22
ACTN4-210ENST00000588618 GHRHP01286 108 aa13.67□□□□□ -0.22
ACTN4-210ENST00000588618 OCIAD2Q56VL3 154 aa13.66□□□□□ -0.22
ACTN4-210ENST00000588618 GAGE2AQ6NT46 116 aa13.65□□□□□ -0.22
ACTN4-210ENST00000588618 GTF2H5Q6ZYL4 71 aa13.65□□□□□ -0.22
ACTN4-210ENST00000588618 ORMDL1Q9P0S3 153 aa13.64□□□□□ -0.23
ACTN4-210ENST00000588618 H3BMG7 143 aa13.64□□□□□ -0.23
ACTN4-210ENST00000588618 K7EP34 96 aa13.64□□□□□ -0.23
ACTN4-210ENST00000588618 SPRR4Q96PI1 79 aa13.64□□□□□ -0.23
ACTN4-210ENST00000588618 TEX49A0A1B0GTD5 131 aa13.61□□□□□ -0.23
ACTN4-210ENST00000588618 LINC01547P58512 204 aaPredicted RBP13.61□□□□□ -0.23
ACTN4-210ENST00000588618 IGLV5-48A0A075B6I7 105 aa13.59□□□□□ -0.23
ACTN4-210ENST00000588618 C9JAW5 83 aa13.59□□□□□ -0.23
ACTN4-210ENST00000588618 H3BQ85 93 aa13.59□□□□□ -0.23
ACTN4-210ENST00000588618 MTURNQ8N3F0 131 aa13.58□□□□□ -0.24
ACTN4-210ENST00000588618 PPDPFLQ8WWR9 84 aa13.58□□□□□ -0.24
ACTN4-210ENST00000588618 TMEM256-PLSCR3K7ERE1 68 aa13.57□□□□□ -0.24
ACTN4-210ENST00000588618 Q8N377 158 aa13.56□□□□□ -0.24
ACTN4-210ENST00000588618 BAALC-AS2P0C853 105 aa13.55□□□□□ -0.24
ACTN4-210ENST00000588618 LINC00483Q53H64 154 aa13.55□□□□□ -0.24
ACTN4-210ENST00000588618 ANAPC11Q9NYG5 84 aa13.54□□□□□ -0.24
ACTN4-210ENST00000588618 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms