RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PLA2G1BP04054 148 aaKnown RBP11.33□□□□□ -0.6
RFFL-211ENST00000584541 PRO1854Q9UHT4 67 aa11.32□□□□□ -0.6
RFFL-211ENST00000584541 BCE1O60756 84 aa11.31□□□□□ -0.6
RFFL-211ENST00000584541 PCP4L1A6NKN8 68 aa11.3□□□□□ -0.6
RFFL-211ENST00000584541 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
RFFL-211ENST00000584541 Q8N1X5 172 aa11.3□□□□□ -0.6
RFFL-211ENST00000584541 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 H7C2G1 150 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 SPRR1AP35321 89 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 Q5VSD8 79 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
RFFL-211ENST00000584541 UBE2AP49459 152 aa11.28□□□□□ -0.6
RFFL-211ENST00000584541 BATFQ16520 125 aa11.28□□□□□ -0.6
RFFL-211ENST00000584541 Q1RN00 199 aa11.28□□□□□ -0.6
RFFL-211ENST00000584541 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
RFFL-211ENST00000584541 K7ERJ3 54 aa11.27□□□□□ -0.61
RFFL-211ENST00000584541 IGLV7-43P04211 117 aa11.26□□□□□ -0.61
RFFL-211ENST00000584541 C6orf99Q4VX62 202 aa11.26□□□□□ -0.61
RFFL-211ENST00000584541 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
RFFL-211ENST00000584541 HSPG2P98160 4391 aa11.23□□□□□ -0.61
RFFL-211ENST00000584541 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
RFFL-211ENST00000584541 VAMP3Q15836 100 aa11.23□□□□□ -0.61
RFFL-211ENST00000584541 TRBV7-6A0A0J9YX20 115 aa11.22□□□□□ -0.61
RFFL-211ENST00000584541 B5MCH6 92 aa11.22□□□□□ -0.61
RFFL-211ENST00000584541 H0Y9J4 135 aa11.22□□□□□ -0.61
RFFL-211ENST00000584541 ZNF861PO60384 105 aa11.22□□□□□ -0.61
RFFL-211ENST00000584541 COX7BP24311 80 aa11.22□□□□□ -0.61
RFFL-211ENST00000584541 PRLHP81277 87 aa11.22□□□□□ -0.61
RFFL-211ENST00000584541 Q6ZRX8 168 aa11.21□□□□□ -0.61
RFFL-211ENST00000584541 KRTAP10-4P60372 401 aaPredicted RBP11.2□□□□□ -0.62
RFFL-211ENST00000584541 TSPAN13O95857 204 aa11.19□□□□□ -0.62
RFFL-211ENST00000584541 PSMB2P49721 201 aa11.19□□□□□ -0.62
RFFL-211ENST00000584541 ELOF1P60002 83 aaKnown RBP11.19□□□□□ -0.62
RFFL-211ENST00000584541 KRTAP13-1Q8IUC0 172 aa11.18□□□□□ -0.62
RFFL-211ENST00000584541 SNHG12Q9BXW3 62 aa11.18□□□□□ -0.62
RFFL-211ENST00000584541 SPINK6Q6UWN8 80 aa11.17□□□□□ -0.62
RFFL-211ENST00000584541 HIGD2AQ9BW72 106 aa11.17□□□□□ -0.62
RFFL-211ENST00000584541 COX6CP09669 75 aa11.16□□□□□ -0.62
RFFL-211ENST00000584541 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
RFFL-211ENST00000584541 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
RFFL-211ENST00000584541 H0YGX0 51 aa11.14□□□□□ -0.63
RFFL-211ENST00000584541 TRIAP1O43715 76 aa11.14□□□□□ -0.63
RFFL-211ENST00000584541 SLC25A20O43772 301 aa11.14□□□□□ -0.63
RFFL-211ENST00000584541 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
RFFL-211ENST00000584541 Q9BRP9 147 aa11.13□□□□□ -0.63
RFFL-211ENST00000584541 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
RFFL-211ENST00000584541 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
RFFL-211ENST00000584541 SNCGO76070 127 aa11.11□□□□□ -0.63
RFFL-211ENST00000584541 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
RFFL-211ENST00000584541 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
RFFL-211ENST00000584541 FAT1Q14517 4588 aa11.1□□□□□ -0.63
RFFL-211ENST00000584541 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
RFFL-211ENST00000584541 KRTAP4-5Q9BYR2 181 aa11.08□□□□□ -0.64
RFFL-211ENST00000584541 ZNF706Q9Y5V0 76 aaPredicted RBP11.08□□□□□ -0.64
RFFL-211ENST00000584541 hADV29S1A0JD25 119 aa11.07□□□□□ -0.64
RFFL-211ENST00000584541 TAX1BP3O14907 124 aa11.07□□□□□ -0.64
RFFL-211ENST00000584541 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
RFFL-211ENST00000584541 C9orf118A6NHY6 69 aa11.06□□□□□ -0.64
RFFL-211ENST00000584541 ERC2-IT1O76042 136 aa11.06□□□□□ -0.64
RFFL-211ENST00000584541 LYRM7Q5U5X0 104 aa11.06□□□□□ -0.64
RFFL-211ENST00000584541 H3BUT2 72 aa11.05□□□□□ -0.64
RFFL-211ENST00000584541 A0A1B0GX51 115 aa11.04□□□□□ -0.64
RFFL-211ENST00000584541 CLEC2BQ92478 149 aa11.04□□□□□ -0.64
RFFL-211ENST00000584541 FAM218AQ96MZ4 157 aa11.02□□□□□ -0.65
RFFL-211ENST00000584541 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
RFFL-211ENST00000584541 SRRM2Q9UQ35 2752 aaKnown RBP11□□□□□ -0.65
RFFL-211ENST00000584541 DNAL4O96015 105 aa11□□□□□ -0.65
RFFL-211ENST00000584541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
RFFL-211ENST00000584541 ST20-AS1Q8NBB2 130 aa11□□□□□ -0.65
RFFL-211ENST00000584541 A0A1W2PPM0 123 aa10.99□□□□□ -0.65
RFFL-211ENST00000584541 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
RFFL-211ENST00000584541 Q6ZQY7 126 aa10.99□□□□□ -0.65
RFFL-211ENST00000584541 FABP2P12104 132 aa10.98□□□□□ -0.65
RFFL-211ENST00000584541 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
RFFL-211ENST00000584541 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
RFFL-211ENST00000584541 LST1O00453 97 aa10.97□□□□□ -0.65
RFFL-211ENST00000584541 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
RFFL-211ENST00000584541 TRBV20-1A0A075B6N2 111 aa10.96□□□□□ -0.65
RFFL-211ENST00000584541 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.65
RFFL-211ENST00000584541 GHRHP01286 108 aa10.96□□□□□ -0.65
RFFL-211ENST00000584541 OCIAD2Q56VL3 154 aa10.96□□□□□ -0.65
RFFL-211ENST00000584541 TCL1BO95988 128 aa10.95□□□□□ -0.66
RFFL-211ENST00000584541 TRACP01848 142 aa10.95□□□□□ -0.66
RFFL-211ENST00000584541 KRTAP1-4P0C5Y4 121 aa10.95□□□□□ -0.66
RFFL-211ENST00000584541 FAM229BQ4G0N7 80 aa10.95□□□□□ -0.66
RFFL-211ENST00000584541 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
RFFL-211ENST00000584541 LINC00483Q53H64 154 aa10.94□□□□□ -0.66
RFFL-211ENST00000584541 SPRR1BP22528 89 aa10.93□□□□□ -0.66
RFFL-211ENST00000584541 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
RFFL-211ENST00000584541 CRYGAP11844 174 aa10.92□□□□□ -0.66
RFFL-211ENST00000584541 PPDPFLQ8WWR9 84 aa10.92□□□□□ -0.66
RFFL-211ENST00000584541 H3BQ85 93 aa10.91□□□□□ -0.66
RFFL-211ENST00000584541 LINC01547P58512 204 aaPredicted RBP10.91□□□□□ -0.66
RFFL-211ENST00000584541 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
RFFL-211ENST00000584541 Q8N377 158 aa10.9□□□□□ -0.66
RFFL-211ENST00000584541 LINC01600Q96MT4 127 aa10.9□□□□□ -0.66
RFFL-211ENST00000584541 LAMTOR3Q9UHA4 124 aa10.9□□□□□ -0.66
RFFL-211ENST00000584541 SPCS1Q9Y6A9 102 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms