RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	TRBV10-3	A0A0K0K1G6	114 aa		4.23	□□□□□ -1.73
PPP4R1-225	ENST00000583438	MT-ND4L	P03901	98 aa		4.23	□□□□□ -1.73
PPP4R1-225	ENST00000583438	KCNQ1DN	Q9H478	68 aa		4.23	□□□□□ -1.73
PPP4R1-225	ENST00000583438	SMIM13	P0DJ93	91 aa		4.22	□□□□□ -1.73
PPP4R1-225	ENST00000583438	COX17	Q14061	63 aa		4.22	□□□□□ -1.73
PPP4R1-225	ENST00000583438		H3BRM9	83 aa		4.21	□□□□□ -1.74
PPP4R1-225	ENST00000583438	TSPEAR-AS2	P59090	65 aa		4.21	□□□□□ -1.74
PPP4R1-225	ENST00000583438	BOD1L2	Q8IYS8	172 aa		4.21	□□□□□ -1.74
PPP4R1-225	ENST00000583438	ST20-AS1	Q8NBB2	130 aa		4.21	□□□□□ -1.74
PPP4R1-225	ENST00000583438	IGLV8-61	A0A075B6I0	122 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	TMEM223	A0PJW6	202 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	C9orf92	A6NGG3	77 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	NDUFA6	P56556	154 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	LINC00158	P58513	81 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	RPS29	P62273	56 aa	Known RBP	4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	MIR7-3HG	Q8N6C7	128 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	C18orf32	Q8TCD1	76 aa		4.2	□□□□□ -1.74
PPP4R1-225	ENST00000583438	G0S2	P27469	103 aa		4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	KRTAP10-7	P60409	375 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	KRTAP10-12	P60413	245 aa		4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	TMEM170B	Q5T4T1	132 aa		4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	FA2H	Q7L5A8	372 aa		4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	OCR1	Q9BZK8	76 aa		4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.19	□□□□□ -1.74
PPP4R1-225	ENST00000583438	SLC25A20	O43772	301 aa		4.18	□□□□□ -1.74
PPP4R1-225	ENST00000583438	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-225	ENST00000583438	BAGE3	Q86Y29	109 aa		4.18	□□□□□ -1.74
PPP4R1-225	ENST00000583438	RPS10P5	Q9NQ39	176 aa		4.18	□□□□□ -1.74
PPP4R1-225	ENST00000583438	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-225	ENST00000583438	ETDC	A0A1B0GVM5	59 aa		4.17	□□□□□ -1.74
PPP4R1-225	ENST00000583438	SOSTDC1	Q6X4U4	206 aa		4.17	□□□□□ -1.74
PPP4R1-225	ENST00000583438		Q6ZRX8	168 aa		4.17	□□□□□ -1.74
PPP4R1-225	ENST00000583438	SSBP3-AS1	Q7Z2R9	100 aa		4.17	□□□□□ -1.74
PPP4R1-225	ENST00000583438	TRAV9-1	A0A075B6T8	112 aa		4.16	□□□□□ -1.74
PPP4R1-225	ENST00000583438	HBD	P02042	147 aa		4.16	□□□□□ -1.74
PPP4R1-225	ENST00000583438	DSCR10	P59022	87 aa		4.16	□□□□□ -1.74
PPP4R1-225	ENST00000583438	FABP9	Q0Z7S8	132 aa		4.16	□□□□□ -1.74
PPP4R1-225	ENST00000583438	SMCO4	Q9NRQ5	59 aa		4.16	□□□□□ -1.74
PPP4R1-225	ENST00000583438		A0A0G2JQZ4	141 aa		4.15	□□□□□ -1.75
PPP4R1-225	ENST00000583438	TMEM218	A2RU14	115 aa		4.15	□□□□□ -1.75
PPP4R1-225	ENST00000583438	LINC01549	A6NIU2	74 aa		4.15	□□□□□ -1.75
PPP4R1-225	ENST00000583438	IFITM2	Q01629	132 aa		4.15	□□□□□ -1.75
PPP4R1-225	ENST00000583438	HRCT1	Q6UXD1	115 aa		4.15	□□□□□ -1.75
PPP4R1-225	ENST00000583438	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-225	ENST00000583438	LOC107984156	A0A0G2JMH3	177 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	IGLV6-57	P01721	117 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	LINC00614	P0C842	121 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	C9orf153	Q5TBE3	101 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	ARL17A	Q8IVW1	177 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	FAM19A2	Q8N3H0	131 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	NDUFA12	Q9UI09	145 aa		4.14	□□□□□ -1.75
PPP4R1-225	ENST00000583438	DDT	P30046	118 aa		4.13	□□□□□ -1.75
PPP4R1-225	ENST00000583438	HERV-K104	P63124	156 aa		4.13	□□□□□ -1.75
PPP4R1-225	ENST00000583438	MEIG1	Q5JSS6	88 aa		4.13	□□□□□ -1.75
PPP4R1-225	ENST00000583438	CLLU1	Q5K131	121 aa		4.13	□□□□□ -1.75
PPP4R1-225	ENST00000583438	C10orf91	Q5T1B1	145 aa		4.12	□□□□□ -1.75
PPP4R1-225	ENST00000583438	SFTA2	Q6UW10	78 aa		4.12	□□□□□ -1.75
PPP4R1-225	ENST00000583438	YPEL4	Q96NS1	127 aa		4.12	□□□□□ -1.75
PPP4R1-225	ENST00000583438	TRAV12-1	A0A0B4J245	112 aa		4.11	□□□□□ -1.75
PPP4R1-225	ENST00000583438		M0R2T5	61 aa		4.11	□□□□□ -1.75
PPP4R1-225	ENST00000583438	SPRR1B	P22528	89 aa		4.11	□□□□□ -1.75
PPP4R1-225	ENST00000583438	LCE1E	Q5T753	118 aa		4.11	□□□□□ -1.75
PPP4R1-225	ENST00000583438	IFI27L1	Q96BM0	104 aa		4.11	□□□□□ -1.75
PPP4R1-225	ENST00000583438	TRBV10-2	A0A0K0K1G8	114 aa		4.1	□□□□□ -1.75
PPP4R1-225	ENST00000583438		H7C2G1	150 aa		4.1	□□□□□ -1.75
PPP4R1-225	ENST00000583438	NPC2	P61916	151 aa		4.1	□□□□□ -1.75
PPP4R1-225	ENST00000583438	RPL37	P61927	97 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-225	ENST00000583438	SEC11C	Q9BY50	192 aa		4.1	□□□□□ -1.75
PPP4R1-225	ENST00000583438	TRAV23DV6	A0A075B6W5	121 aa		4.09	□□□□□ -1.75
PPP4R1-225	ENST00000583438	ZNF73	O43830	326 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-225	ENST00000583438	C1orf195	Q5TG92	126 aa		4.09	□□□□□ -1.75
PPP4R1-225	ENST00000583438	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-225	ENST00000583438	TRAPPC1	Q9Y5R8	145 aa		4.09	□□□□□ -1.75
PPP4R1-225	ENST00000583438	S100P	P25815	95 aa		4.08	□□□□□ -1.76
PPP4R1-225	ENST00000583438	UQCC3	Q6UW78	93 aa		4.08	□□□□□ -1.76
PPP4R1-225	ENST00000583438	PMCHL2	Q9BQD1	86 aa		4.08	□□□□□ -1.76
PPP4R1-225	ENST00000583438	MYMX	A0A1B0GTQ4	84 aa		4.07	□□□□□ -1.76
PPP4R1-225	ENST00000583438	ATP6V1G1	O75348	118 aa		4.07	□□□□□ -1.76
PPP4R1-225	ENST00000583438		Q1RN00	199 aa		4.07	□□□□□ -1.76
PPP4R1-225	ENST00000583438	COX19	Q49B96	90 aa		4.07	□□□□□ -1.76
PPP4R1-225	ENST00000583438		H0Y8G0	127 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	LEPROT	O15243	131 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	NDUFC2	O95298	119 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	KRTAP10-5	P60370	271 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	RHEB	Q15382	184 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	COMMD7	Q86VX2	200 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	LINC00518	Q8N0U6	118 aa		4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	MACF1	Q9UPN3	7388 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-225	ENST00000583438	SYNE2	Q8WXH0	6885 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-225	ENST00000583438		J3QQQ9	107 aa		4.05	□□□□□ -1.76
PPP4R1-225	ENST00000583438	LCE3C	Q5T5A8	94 aa		4.05	□□□□□ -1.76
PPP4R1-225	ENST00000583438		A0A0J9YXY3	114 aa		4.04	□□□□□ -1.76
PPP4R1-225	ENST00000583438	S100A7L2	Q5SY68	101 aa		4.04	□□□□□ -1.76
PPP4R1-225	ENST00000583438	COX6B2	Q6YFQ2	88 aa		4.04	□□□□□ -1.76
PPP4R1-225	ENST00000583438	DHRS4-AS1	Q9P1J3	65 aa		4.04	□□□□□ -1.76
PPP4R1-225	ENST00000583438	MT2A	P02795	61 aa		4.03	□□□□□ -1.76
PPP4R1-225	ENST00000583438	MT1F	P04733	61 aa		4.03	□□□□□ -1.76
PPP4R1-225	ENST00000583438		Q5XG85	94 aa		4.03	□□□□□ -1.76
PPP4R1-225	ENST00000583438	CHCHD1	Q96BP2	118 aa	Known RBP	4.03	□□□□□ -1.76
PPP4R1-225	ENST00000583438	LIMD2	Q9BT23	127 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms