RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ANK3Q12955 4377 aaKnown RBP-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 C20orf202A1L168 122 aa-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 ATOX1O00244 68 aa-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 COX6B2Q6YFQ2 88 aa-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 SERP2Q8N6R1 65 aa-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 PMCHL2Q9BQD1 86 aa-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 MON2Q7Z3U7 1717 aa-1.3□□□□□ -2.62
SMARCE1-219ENST00000583294 ANKRD50Q9ULJ7 1429 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 BCORQ6W2J9 1755 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 DNAH11Q96DT5 4516 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 MGAM2Q2M2H8 2515 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 ABCA3Q99758 1704 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 C5P01031 1676 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 D6R8Y8 96 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 LEPROTL1O95214 131 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 MUSTN1Q8IVN3 82 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 FAM135AQ9P2D6 1515 aa-1.31□□□□□ -2.62
SMARCE1-219ENST00000583294 ETDBQ3ZM63 59 aa-1.32□□□□□ -2.62
SMARCE1-219ENST00000583294 ZNF720Q7Z2F6 126 aa-1.32□□□□□ -2.62
SMARCE1-219ENST00000583294 NRXN1Q9ULB1 1477 aa-1.32□□□□□ -2.62
SMARCE1-219ENST00000583294 ANKRD36BQ8N2N9 1353 aa-1.34□□□□□ -2.62
SMARCE1-219ENST00000583294 MAGI2Q86UL8 1455 aa-1.34□□□□□ -2.62
SMARCE1-219ENST00000583294 COX7BP24311 80 aa-1.34□□□□□ -2.62
SMARCE1-219ENST00000583294 VPS13BQ7Z7G8 4022 aa-1.34□□□□□ -2.62
SMARCE1-219ENST00000583294 KALRNO60229 2985 aa-1.35□□□□□ -2.62
SMARCE1-219ENST00000583294 ZFYVE16Q7Z3T8 1539 aa-1.35□□□□□ -2.62
SMARCE1-219ENST00000583294 TRIOO75962 3097 aa-1.35□□□□□ -2.63
SMARCE1-219ENST00000583294 F8WEM9 126 aa-1.35□□□□□ -2.63
SMARCE1-219ENST00000583294 MT-ATP8P03928 68 aa-1.35□□□□□ -2.63
SMARCE1-219ENST00000583294 KIF20BQ96Q89 1820 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 WDR87Q6ZQQ6 2873 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 PLECQ15149 4684 aaKnown RBP-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 K7EP34 96 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 NDUFA3O95167 84 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 RPL38P63173 70 aaKnown RBP-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 RELNP78509 3460 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 MTORP42345 2549 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 NBEAQ8NFP9 2946 aa-1.36□□□□□ -2.63
SMARCE1-219ENST00000583294 ACACAQ13085 2346 aa-1.37□□□□□ -2.63
SMARCE1-219ENST00000583294 UQCRHLA0A096LP55 91 aa-1.37□□□□□ -2.63
SMARCE1-219ENST00000583294 COL5A1-AS1Q5SY13 56 aa-1.37□□□□□ -2.63
SMARCE1-219ENST00000583294 UBE2D4Q9Y2X8 147 aa-1.37□□□□□ -2.63
SMARCE1-219ENST00000583294 PDE4DIPQ5VU43 2346 aa-1.37□□□□□ -2.63
SMARCE1-219ENST00000583294 UTP20O75691 2785 aaKnown RBP-1.37□□□□□ -2.63
SMARCE1-219ENST00000583294 PREX1Q8TCU6 1659 aa-1.38□□□□□ -2.63
SMARCE1-219ENST00000583294 RGPD2P0DJD1 1756 aa-1.38□□□□□ -2.63
SMARCE1-219ENST00000583294 MAP3K1Q13233 1512 aa-1.39□□□□□ -2.63
SMARCE1-219ENST00000583294 LINC00032P0C843 101 aa-1.39□□□□□ -2.63
SMARCE1-219ENST00000583294 KRTAP19-5Q3LI72 72 aa-1.39□□□□□ -2.63
SMARCE1-219ENST00000583294 S4R3F8 94 aa-1.39□□□□□ -2.63
SMARCE1-219ENST00000583294 NIPBLQ6KC79 2804 aaeCLIP-1.39□□□□□ -2.63
SMARCE1-219ENST00000583294 CRYBG1Q9Y4K1 1723 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 H0YAA0 97 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 FAUP35544 74 aaKnown RBP-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 DEFB1P60022 68 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 S100A10P60903 97 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 LRRC9Q6ZRR7 1453 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 UBR3Q6ZT12 1888 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 QSER1Q2KHR3 1735 aa-1.4□□□□□ -2.63
SMARCE1-219ENST00000583294 TEX15Q9BXT5 2789 aa-1.41□□□□□ -2.63
SMARCE1-219ENST00000583294 SACSQ9NZJ4 4579 aa-1.41□□□□□ -2.63
SMARCE1-219ENST00000583294 RGPD8O14715 1765 aaPredicted RBP-1.41□□□□□ -2.63
SMARCE1-219ENST00000583294 RGPD5Q99666 1765 aa-1.41□□□□□ -2.63
SMARCE1-219ENST00000583294 FYCO1Q9BQS8 1478 aa-1.41□□□□□ -2.63
SMARCE1-219ENST00000583294 C3orf79P0CE67 100 aa-1.41□□□□□ -2.64
SMARCE1-219ENST00000583294 PRLHP81277 87 aa-1.41□□□□□ -2.64
SMARCE1-219ENST00000583294 DNAH1Q9P2D7 4330 aa-1.41□□□□□ -2.64
SMARCE1-219ENST00000583294 DEFB110Q30KQ9 67 aa-1.42□□□□□ -2.64
SMARCE1-219ENST00000583294 GCN1Q92616 2671 aaKnown RBP-1.42□□□□□ -2.64
SMARCE1-219ENST00000583294 TEX14Q8IWB6 1497 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 A0A0C4DFX4 3053 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 PKD1L2Q7Z442 2459 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 EPRSP07814 1512 aaKnown RBP-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 A0A1B0GUT8 65 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 GAFA1Q96PS6 74 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 DPY30Q9C005 99 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 PKD1L3Q7Z443 1732 aa-1.43□□□□□ -2.64
SMARCE1-219ENST00000583294 S100PP25815 95 aa-1.44□□□□□ -2.64
SMARCE1-219ENST00000583294 MT1XP80297 61 aa-1.44□□□□□ -2.64
SMARCE1-219ENST00000583294 FAM186AA6NE01 2351 aa-1.44□□□□□ -2.64
SMARCE1-219ENST00000583294 USP9XQ93008 2570 aaPredicted RBP-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 DNHD1Q96M86 4753 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 C4AP0C0L4 1744 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 C4BP0C0L5 1744 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 IQCF6A8MYZ5 107 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 COL12A1Q99715 3063 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 LRRK2Q5S007 2527 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 LRRC7Q96NW7 1537 aa-1.45□□□□□ -2.64
SMARCE1-219ENST00000583294 NBEAL2Q6ZNJ1 2754 aa-1.46□□□□□ -2.64
SMARCE1-219ENST00000583294 RANBP2P49792 3224 aaKnown RBP-1.46□□□□□ -2.64
SMARCE1-219ENST00000583294 PLGLAQ15195 96 aa-1.46□□□□□ -2.64
SMARCE1-219ENST00000583294 C14orf144Q96I85 54 aa-1.46□□□□□ -2.64
SMARCE1-219ENST00000583294 CCDC168Q8NDH2 2452 aa-1.47□□□□□ -2.64
SMARCE1-219ENST00000583294 CLTCQ00610 1675 aaKnown RBP-1.47□□□□□ -2.64
SMARCE1-219ENST00000583294 FANCAO15360 1455 aa-1.47□□□□□ -2.64
SMARCE1-219ENST00000583294 SMIM11AP58511 58 aa-1.47□□□□□ -2.64
SMARCE1-219ENST00000583294 TCEAL7Q9BRU2 100 aa-1.47□□□□□ -2.64
SMARCE1-219ENST00000583294 PRO3102Q9H379 93 aa-1.47□□□□□ -2.64
SMARCE1-219ENST00000583294 ABCA13Q86UQ4 5058 aa-1.47□□□□□ -2.65
SMARCE1-219ENST00000583294 FRYQ5TBA9 3013 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms