RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 VAMP3Q15836 100 aa5.46□□□□□ -1.54
PDLIM1P3-201ENST00000582370 BVES-AS1Q5T3Y7 98 aa5.46□□□□□ -1.54
PDLIM1P3-201ENST00000582370 FAM19A5Q7Z5A7 132 aaPredicted RBP5.46□□□□□ -1.54
PDLIM1P3-201ENST00000582370 IGLV1-50A0A075B6I6 118 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 TRBV7-6A0A0J9YX20 115 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 PRYO14603 147 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 COX6CP09669 75 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 CHTF8P0CG12 524 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 UBE2BP63146 152 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 OR13C6PQ8NH95 151 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 KCNQ1DNQ9H478 68 aa5.45□□□□□ -1.54
PDLIM1P3-201ENST00000582370 A0A1W2PNN7 141 aa5.44□□□□□ -1.54
PDLIM1P3-201ENST00000582370 CFC1BP0CG36 223 aa5.44□□□□□ -1.54
PDLIM1P3-201ENST00000582370 CFC1P0CG37 223 aa5.44□□□□□ -1.54
PDLIM1P3-201ENST00000582370 LYRM7Q5U5X0 104 aa5.44□□□□□ -1.54
PDLIM1P3-201ENST00000582370 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
PDLIM1P3-201ENST00000582370 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 TRAV23DV6A0A075B6W5 121 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 H0Y9J4 135 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 NCR3O14931 201 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 GHRHP01286 108 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 FXYD2P54710 66 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 LINC01600Q96MT4 127 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 LINC00167Q96N53 147 aa5.43□□□□□ -1.54
PDLIM1P3-201ENST00000582370 H0YGX0 51 aa5.42□□□□□ -1.54
PDLIM1P3-201ENST00000582370 RPL28P46779 137 aaKnown RBP5.42□□□□□ -1.54
PDLIM1P3-201ENST00000582370 COL5A1-AS1Q5SY13 56 aa5.42□□□□□ -1.54
PDLIM1P3-201ENST00000582370 REG3GQ6UW15 175 aa5.42□□□□□ -1.54
PDLIM1P3-201ENST00000582370 DIRC1Q969H9 104 aa5.42□□□□□ -1.54
PDLIM1P3-201ENST00000582370 TRBV10-3A0A0K0K1G6 114 aa5.41□□□□□ -1.54
PDLIM1P3-201ENST00000582370 PANO1I0J062 215 aa5.41□□□□□ -1.54
PDLIM1P3-201ENST00000582370 ZNF73O43830 326 aaPredicted RBP5.41□□□□□ -1.54
PDLIM1P3-201ENST00000582370 EIF4EBP3O60516 100 aaPredicted RBP5.41□□□□□ -1.54
PDLIM1P3-201ENST00000582370 RPL13AP40429 203 aaKnown RBP5.41□□□□□ -1.54
PDLIM1P3-201ENST00000582370 Q1RN00 199 aa5.41□□□□□ -1.54
PDLIM1P3-201ENST00000582370 PCP4L1A6NKN8 68 aa5.4□□□□□ -1.54
PDLIM1P3-201ENST00000582370 BCE1O60756 84 aa5.4□□□□□ -1.54
PDLIM1P3-201ENST00000582370 SPRR1AP35321 89 aa5.4□□□□□ -1.54
PDLIM1P3-201ENST00000582370 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
PDLIM1P3-201ENST00000582370 KRTAP7-1Q8IUC3 87 aa5.4□□□□□ -1.54
PDLIM1P3-201ENST00000582370 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
PDLIM1P3-201ENST00000582370 A0A1B0GX51 115 aa5.39□□□□□ -1.55
PDLIM1P3-201ENST00000582370 SLC25A20O43772 301 aa5.39□□□□□ -1.55
PDLIM1P3-201ENST00000582370 PHF5AQ7RTV0 110 aaKnown RBP5.39□□□□□ -1.55
PDLIM1P3-201ENST00000582370 DHRS4-AS1Q9P1J3 65 aa5.39□□□□□ -1.55
PDLIM1P3-201ENST00000582370 GAGE10A6NGK3 116 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 RPL37AP8A6NKH3 93 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 H3BQ85 93 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 PSMB2P49721 201 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 BATFQ16520 125 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 Q8NDZ9 215 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 SMIM11BQ8TCY0 68 aa5.38□□□□□ -1.55
PDLIM1P3-201ENST00000582370 TRBV20-1A0A075B6N2 111 aa5.37□□□□□ -1.55
PDLIM1P3-201ENST00000582370 C6orf99Q4VX62 202 aa5.37□□□□□ -1.55
PDLIM1P3-201ENST00000582370 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
PDLIM1P3-201ENST00000582370 Q6ZRX8 168 aa5.37□□□□□ -1.55
PDLIM1P3-201ENST00000582370 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
PDLIM1P3-201ENST00000582370 COX7BP24311 80 aa5.36□□□□□ -1.55
PDLIM1P3-201ENST00000582370 UBE2AP49459 152 aa5.36□□□□□ -1.55
PDLIM1P3-201ENST00000582370 ELOF1P60002 83 aaKnown RBP5.36□□□□□ -1.55
PDLIM1P3-201ENST00000582370 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
PDLIM1P3-201ENST00000582370 OCIAD2Q56VL3 154 aa5.36□□□□□ -1.55
PDLIM1P3-201ENST00000582370 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
PDLIM1P3-201ENST00000582370 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 H7C2G1 150 aa5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 TSPAN13O95857 204 aa5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 C1orf137Q5JT78 98 aa5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 ZNF706Q9Y5V0 76 aaPredicted RBP5.35□□□□□ -1.55
PDLIM1P3-201ENST00000582370 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
PDLIM1P3-201ENST00000582370 B5MCH6 92 aa5.34□□□□□ -1.55
PDLIM1P3-201ENST00000582370 K7ERJ3 54 aa5.34□□□□□ -1.55
PDLIM1P3-201ENST00000582370 ZNF861PO60384 105 aa5.34□□□□□ -1.55
PDLIM1P3-201ENST00000582370 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
PDLIM1P3-201ENST00000582370 PPDPFLQ8WWR9 84 aa5.34□□□□□ -1.55
PDLIM1P3-201ENST00000582370 DNAL4O96015 105 aa5.33□□□□□ -1.56
PDLIM1P3-201ENST00000582370 FABP2P12104 132 aa5.33□□□□□ -1.56
PDLIM1P3-201ENST00000582370 SPINK6Q6UWN8 80 aa5.33□□□□□ -1.56
PDLIM1P3-201ENST00000582370 hADV29S1A0JD25 119 aa5.32□□□□□ -1.56
PDLIM1P3-201ENST00000582370 TRIAP1O43715 76 aa5.32□□□□□ -1.56
PDLIM1P3-201ENST00000582370 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
PDLIM1P3-201ENST00000582370 TAX1BP3O14907 124 aa5.31□□□□□ -1.56
PDLIM1P3-201ENST00000582370 TRACP01848 142 aa5.31□□□□□ -1.56
PDLIM1P3-201ENST00000582370 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.31□□□□□ -1.56
PDLIM1P3-201ENST00000582370 LINC00575Q6W349 94 aa5.31□□□□□ -1.56
PDLIM1P3-201ENST00000582370 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
PDLIM1P3-201ENST00000582370 A0A1W2PPM0 123 aa5.3□□□□□ -1.56
PDLIM1P3-201ENST00000582370 H3BUT2 72 aa5.3□□□□□ -1.56
PDLIM1P3-201ENST00000582370 GTF2H5Q6ZYL4 71 aa5.3□□□□□ -1.56
PDLIM1P3-201ENST00000582370 HIGD2AQ9BW72 106 aa5.29□□□□□ -1.56
PDLIM1P3-201ENST00000582370 TMEM256-PLSCR3K7ERE1 68 aa5.28□□□□□ -1.56
PDLIM1P3-201ENST00000582370 LST1O00453 97 aa5.28□□□□□ -1.56
PDLIM1P3-201ENST00000582370 PRLHP81277 87 aa5.28□□□□□ -1.56
PDLIM1P3-201ENST00000582370 C21orf62-AS1Q17RA5 79 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms