RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
RFFL-208ENST00000581039 SPRR1BP22528 89 aa5.28□□□□□ -1.56
RFFL-208ENST00000581039 RPL37P61927 97 aaKnown RBP5.28□□□□□ -1.56
RFFL-208ENST00000581039 IFITM2Q01629 132 aa5.28□□□□□ -1.56
RFFL-208ENST00000581039 CLLU1Q5K131 121 aa5.28□□□□□ -1.56
RFFL-208ENST00000581039 LEPROTO15243 131 aa5.27□□□□□ -1.57
RFFL-208ENST00000581039 CD164Q04900 197 aa5.27□□□□□ -1.57
RFFL-208ENST00000581039 RPS10P5Q9NQ39 176 aa5.27□□□□□ -1.57
RFFL-208ENST00000581039 CBY1Q9Y3M2 126 aa5.27□□□□□ -1.57
RFFL-208ENST00000581039 H7C2G1 150 aa5.26□□□□□ -1.57
RFFL-208ENST00000581039 TSPEAR-AS2P59090 65 aa5.26□□□□□ -1.57
RFFL-208ENST00000581039 CHCHD1Q96BP2 118 aaKnown RBP5.26□□□□□ -1.57
RFFL-208ENST00000581039 RHEBQ15382 184 aa5.25□□□□□ -1.57
RFFL-208ENST00000581039 PRO1933Q9H354 126 aa5.25□□□□□ -1.57
RFFL-208ENST00000581039 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
RFFL-208ENST00000581039 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
RFFL-208ENST00000581039 H0Y8G0 127 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 J3QQQ9 107 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 NMUP48645 174 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 NPC2P61916 151 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 C1orf195Q5TG92 126 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 Q6Q795 121 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
RFFL-208ENST00000581039 LGALS3P17931 250 aaKnown RBP5.23□□□□□ -1.57
RFFL-208ENST00000581039 TAL2Q16559 108 aa5.23□□□□□ -1.57
RFFL-208ENST00000581039 Q1RN00 199 aa5.23□□□□□ -1.57
RFFL-208ENST00000581039 Q5XG85 94 aa5.23□□□□□ -1.57
RFFL-208ENST00000581039 DEFB105AQ8NG35 78 aa5.23□□□□□ -1.57
RFFL-208ENST00000581039 OR13C6PQ8NH95 151 aa5.23□□□□□ -1.57
RFFL-208ENST00000581039 AKR1D1P51857 326 aa5.22□□□□□ -1.57
RFFL-208ENST00000581039 HERVK_113P61574 105 aa5.22□□□□□ -1.57
RFFL-208ENST00000581039 SOSTDC1Q6X4U4 206 aa5.22□□□□□ -1.57
RFFL-208ENST00000581039 SLC7A5P1Q8MH63 180 aa5.22□□□□□ -1.57
RFFL-208ENST00000581039 USH2AO75445 5202 aa5.22□□□□□ -1.57
RFFL-208ENST00000581039 EIF4EBP3O60516 100 aaPredicted RBP5.21□□□□□ -1.58
RFFL-208ENST00000581039 HSBP1O75506 76 aa5.21□□□□□ -1.58
RFFL-208ENST00000581039 CFC1P0CG37 223 aa5.21□□□□□ -1.58
RFFL-208ENST00000581039 PLNP26678 52 aa5.21□□□□□ -1.58
RFFL-208ENST00000581039 NDUFA5Q16718 116 aa5.21□□□□□ -1.58
RFFL-208ENST00000581039 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
RFFL-208ENST00000581039 TEX49A0A1B0GTD5 131 aa5.2□□□□□ -1.58
RFFL-208ENST00000581039 C10orf91Q5T1B1 145 aa5.2□□□□□ -1.58
RFFL-208ENST00000581039 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
RFFL-208ENST00000581039 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
RFFL-208ENST00000581039 COX7BP24311 80 aa5.19□□□□□ -1.58
RFFL-208ENST00000581039 DPM2O94777 84 aa5.18□□□□□ -1.58
RFFL-208ENST00000581039 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
RFFL-208ENST00000581039 TCL1BO95988 128 aa5.18□□□□□ -1.58
RFFL-208ENST00000581039 S100A1P23297 94 aa5.18□□□□□ -1.58
RFFL-208ENST00000581039 ELOF1P60002 83 aaKnown RBP5.18□□□□□ -1.58
RFFL-208ENST00000581039 SPANXCQ9NY87 97 aa5.18□□□□□ -1.58
RFFL-208ENST00000581039 A0A0G2JQZ4 141 aa5.17□□□□□ -1.58
RFFL-208ENST00000581039 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
RFFL-208ENST00000581039 SPANXDQ9BXN6 97 aa5.17□□□□□ -1.58
RFFL-208ENST00000581039 IGKCP01834 107 aa5.16□□□□□ -1.58
RFFL-208ENST00000581039 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
RFFL-208ENST00000581039 LINC00308Q8TCZ7 52 aa5.16□□□□□ -1.58
RFFL-208ENST00000581039 PMCHL2Q9BQD1 86 aa5.16□□□□□ -1.58
RFFL-208ENST00000581039 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
RFFL-208ENST00000581039 LINC00518Q8N0U6 118 aa5.14□□□□□ -1.59
RFFL-208ENST00000581039 HSPB8Q9UJY1 196 aa5.14□□□□□ -1.59
RFFL-208ENST00000581039 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
RFFL-208ENST00000581039 C20orf202A1L168 122 aa5.13□□□□□ -1.59
RFFL-208ENST00000581039 APOC3P02656 99 aa5.13□□□□□ -1.59
RFFL-208ENST00000581039 FABP4P15090 132 aa5.13□□□□□ -1.59
RFFL-208ENST00000581039 PCP2Q8IVA1 136 aa5.13□□□□□ -1.59
RFFL-208ENST00000581039 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
RFFL-208ENST00000581039 TRBV7-6A0A0J9YX20 115 aa5.12□□□□□ -1.59
RFFL-208ENST00000581039 E9PLD3 99 aa5.12□□□□□ -1.59
RFFL-208ENST00000581039 SNAPINO95295 136 aa5.12□□□□□ -1.59
RFFL-208ENST00000581039 LITAFQ99732 161 aa5.12□□□□□ -1.59
RFFL-208ENST00000581039 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
RFFL-208ENST00000581039 A0A1B0GWB2 263 aa5.11□□□□□ -1.59
RFFL-208ENST00000581039 TIMM17BO60830 172 aa5.11□□□□□ -1.59
RFFL-208ENST00000581039 SERF1AO75920 110 aa5.11□□□□□ -1.59
RFFL-208ENST00000581039 Q75L30 129 aa5.11□□□□□ -1.59
RFFL-208ENST00000581039 OBSCN-AS1Q96MR7 158 aa5.11□□□□□ -1.59
RFFL-208ENST00000581039 TMA7Q9Y2S6 64 aaKnown RBP5.11□□□□□ -1.59
RFFL-208ENST00000581039 SVBPQ8N300 66 aa5.1□□□□□ -1.59
RFFL-208ENST00000581039 YPEL4Q96NS1 127 aa5.1□□□□□ -1.59
RFFL-208ENST00000581039 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
RFFL-208ENST00000581039 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
RFFL-208ENST00000581039 TRBV20-1A0A075B6N2 111 aa5.08□□□□□ -1.6
RFFL-208ENST00000581039 F8WEM9 126 aa5.08□□□□□ -1.6
RFFL-208ENST00000581039 LINC00310P59036 64 aa5.08□□□□□ -1.6
RFFL-208ENST00000581039 A4D1N5 150 aa5.07□□□□□ -1.6
RFFL-208ENST00000581039 A6NDN8 102 aa5.07□□□□□ -1.6
RFFL-208ENST00000581039 TRGC2P03986 189 aa5.07□□□□□ -1.6
RFFL-208ENST00000581039 NHP2Q9NX24 153 aaKnown RBP5.07□□□□□ -1.6
RFFL-208ENST00000581039 ZNF815PA8K554 130 aa5.06□□□□□ -1.6
RFFL-208ENST00000581039 Q96NJ1 140 aa5.06□□□□□ -1.6
RFFL-208ENST00000581039 TRBV7-7A0A0K0K1E9 115 aa5.05□□□□□ -1.6
RFFL-208ENST00000581039 MT2AP02795 61 aa5.05□□□□□ -1.6
RFFL-208ENST00000581039 LCE2BO14633 110 aa5.04□□□□□ -1.6
RFFL-208ENST00000581039 Q6JHZ5 121 aa5.04□□□□□ -1.6
RFFL-208ENST00000581039 COPS9Q8WXC6 57 aa5.04□□□□□ -1.6
RFFL-208ENST00000581039 TTTY13Q9BZ97 58 aa5.03□□□□□ -1.6
RFFL-208ENST00000581039 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
RFFL-208ENST00000581039 SCGB1D4Q6XE38 83 aa5.02□□□□□ -1.61
RFFL-208ENST00000581039 CLEC2BQ92478 149 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms