RNA–Protein interactions for RNA: ENST00000580110.5

TRIM16-219, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 580 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-219	ENST00000580110	SPRR1A	P35321	89 aa		6.78	□□□□□ -1.32
TRIM16-219	ENST00000580110	USH2A	O75445	5202 aa		6.77	□□□□□ -1.33
TRIM16-219	ENST00000580110	IGLV5-39	A0A0G2JS06	123 aa		6.77	□□□□□ -1.33
TRIM16-219	ENST00000580110	TRGC2	P03986	189 aa		6.77	□□□□□ -1.33
TRIM16-219	ENST00000580110	CST9L	Q9H4G1	147 aa		6.77	□□□□□ -1.33
TRIM16-219	ENST00000580110	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.76	□□□□□ -1.33
TRIM16-219	ENST00000580110	C9orf153	Q5TBE3	101 aa		6.76	□□□□□ -1.33
TRIM16-219	ENST00000580110	C20orf202	A1L168	122 aa		6.75	□□□□□ -1.33
TRIM16-219	ENST00000580110	ERC2-IT1	O76042	136 aa		6.75	□□□□□ -1.33
TRIM16-219	ENST00000580110	KCNQ1DN	Q9H478	68 aa		6.75	□□□□□ -1.33
TRIM16-219	ENST00000580110	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.75	□□□□□ -1.33
TRIM16-219	ENST00000580110	TRAV9-1	A0A075B6T8	112 aa		6.74	□□□□□ -1.33
TRIM16-219	ENST00000580110	UBE2V1	Q13404	147 aa		6.74	□□□□□ -1.33
TRIM16-219	ENST00000580110	PMVK	Q15126	192 aa		6.74	□□□□□ -1.33
TRIM16-219	ENST00000580110	NCR3	O14931	201 aa		6.73	□□□□□ -1.33
TRIM16-219	ENST00000580110	IGLV6-57	P01721	117 aa		6.73	□□□□□ -1.33
TRIM16-219	ENST00000580110	CFC1	P0CG37	223 aa		6.73	□□□□□ -1.33
TRIM16-219	ENST00000580110	SCGB1A1	P11684	91 aa		6.73	□□□□□ -1.33
TRIM16-219	ENST00000580110	LINC00158	P58513	81 aa		6.73	□□□□□ -1.33
TRIM16-219	ENST00000580110	ANAPC16	Q96DE5	110 aa		6.73	□□□□□ -1.33
TRIM16-219	ENST00000580110	LIMD2	Q9BT23	127 aa		6.72	□□□□□ -1.33
TRIM16-219	ENST00000580110		B5MCH6	92 aa		6.71	□□□□□ -1.34
TRIM16-219	ENST00000580110	SFTA2	Q6UW10	78 aa		6.71	□□□□□ -1.34
TRIM16-219	ENST00000580110		A0A0U1RRA0	63 aa		6.7	□□□□□ -1.34
TRIM16-219	ENST00000580110	LINC01549	A6NIU2	74 aa		6.7	□□□□□ -1.34
TRIM16-219	ENST00000580110	IGLC3	P0DOY3	106 aa		6.7	□□□□□ -1.34
TRIM16-219	ENST00000580110	ZNF22	P17026	224 aa	Predicted RBP	6.7	□□□□□ -1.34
TRIM16-219	ENST00000580110	BOD1L2	Q8IYS8	172 aa		6.7	□□□□□ -1.34
TRIM16-219	ENST00000580110	UQCR10	Q9UDW1	63 aa		6.7	□□□□□ -1.34
TRIM16-219	ENST00000580110	TRBV10-3	A0A0K0K1G6	114 aa		6.69	□□□□□ -1.34
TRIM16-219	ENST00000580110		K7ERU9	68 aa		6.69	□□□□□ -1.34
TRIM16-219	ENST00000580110		Q9BRP9	147 aa		6.69	□□□□□ -1.34
TRIM16-219	ENST00000580110	RPL37	P61927	97 aa	Known RBP	6.68	□□□□□ -1.34
TRIM16-219	ENST00000580110	COX19	Q49B96	90 aa		6.68	□□□□□ -1.34
TRIM16-219	ENST00000580110	KRTAP19-1	Q8IUB9	90 aa		6.68	□□□□□ -1.34
TRIM16-219	ENST00000580110	HRCT1	Q6UXD1	115 aa		6.67	□□□□□ -1.34
TRIM16-219	ENST00000580110	VAMP8	Q9BV40	100 aa		6.67	□□□□□ -1.34
TRIM16-219	ENST00000580110	KIAA1644	Q3SXP7	199 aa		6.66	□□□□□ -1.34
TRIM16-219	ENST00000580110		Q6Q795	121 aa		6.66	□□□□□ -1.34
TRIM16-219	ENST00000580110		Q6ZRX8	168 aa		6.66	□□□□□ -1.34
TRIM16-219	ENST00000580110	KRTAP9-8	Q9BYQ0	159 aa		6.66	□□□□□ -1.34
TRIM16-219	ENST00000580110	LINC01546	A6NGU7	62 aa		6.64	□□□□□ -1.35
TRIM16-219	ENST00000580110	SCGB1D1	O95968	90 aa		6.64	□□□□□ -1.35
TRIM16-219	ENST00000580110	OCIAD2	Q56VL3	154 aa		6.64	□□□□□ -1.35
TRIM16-219	ENST00000580110	SMIM13	P0DJ93	91 aa		6.63	□□□□□ -1.35
TRIM16-219	ENST00000580110	PMCHL1	Q16048	86 aa		6.63	□□□□□ -1.35
TRIM16-219	ENST00000580110	MACF1	Q9UPN3	7388 aa	Known RBP	6.63	□□□□□ -1.35
TRIM16-219	ENST00000580110	TMEM170B	Q5T4T1	132 aa		6.62	□□□□□ -1.35
TRIM16-219	ENST00000580110	MIR7-3HG	Q8N6C7	128 aa		6.62	□□□□□ -1.35
TRIM16-219	ENST00000580110	C11orf86	A6NJI1	115 aa		6.61	□□□□□ -1.35
TRIM16-219	ENST00000580110	MEIG1	Q5JSS6	88 aa		6.61	□□□□□ -1.35
TRIM16-219	ENST00000580110	MTURN	Q8N3F0	131 aa		6.61	□□□□□ -1.35
TRIM16-219	ENST00000580110	ST20-AS1	Q8NBB2	130 aa		6.61	□□□□□ -1.35
TRIM16-219	ENST00000580110	FA2H	Q7L5A8	372 aa		6.6	□□□□□ -1.35
TRIM16-219	ENST00000580110	VPS25	Q9BRG1	176 aa		6.6	□□□□□ -1.35
TRIM16-219	ENST00000580110		A0A1B0GV72	72 aa		6.59	□□□□□ -1.35
TRIM16-219	ENST00000580110	LCE2B	O14633	110 aa		6.57	□□□□□ -1.36
TRIM16-219	ENST00000580110	TRAPPC1	Q9Y5R8	145 aa		6.57	□□□□□ -1.36
TRIM16-219	ENST00000580110	TRBV10-2	A0A0K0K1G8	114 aa		6.56	□□□□□ -1.36
TRIM16-219	ENST00000580110	SPATA45	Q537H7	98 aa		6.56	□□□□□ -1.36
TRIM16-219	ENST00000580110		A0A096LNJ9	63 aa		6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110		H7C2G1	150 aa		6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110	LINC00310	P59036	64 aa		6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110	C1orf195	Q5TG92	126 aa		6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110	SLC25A34	Q6PIV7	304 aa		6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110	BAGE3	Q86Y29	109 aa		6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110	SYNE2	Q8WXH0	6885 aa	Known RBP	6.55	□□□□□ -1.36
TRIM16-219	ENST00000580110	HERV-K104	P63124	156 aa		6.54	□□□□□ -1.36
TRIM16-219	ENST00000580110	CD164	Q04900	197 aa		6.54	□□□□□ -1.36
TRIM16-219	ENST00000580110	PMCHL2	Q9BQD1	86 aa		6.54	□□□□□ -1.36
TRIM16-219	ENST00000580110	PAM16	Q9Y3D7	125 aa		6.54	□□□□□ -1.36
TRIM16-219	ENST00000580110	TRAV23DV6	A0A075B6W5	121 aa		6.53	□□□□□ -1.36
TRIM16-219	ENST00000580110	TMEM223	A0PJW6	202 aa		6.53	□□□□□ -1.36
TRIM16-219	ENST00000580110	SPRR1B	P22528	89 aa		6.53	□□□□□ -1.36
TRIM16-219	ENST00000580110	S100A7L2	Q5SY68	101 aa		6.53	□□□□□ -1.36
TRIM16-219	ENST00000580110	MAP1LC3C	Q9BXW4	147 aa		6.53	□□□□□ -1.36
TRIM16-219	ENST00000580110	LAMTOR3	Q9UHA4	124 aa		6.53	□□□□□ -1.36
TRIM16-219	ENST00000580110	MT2A	P02795	61 aa		6.52	□□□□□ -1.37
TRIM16-219	ENST00000580110	GTF2H5	Q6ZYL4	71 aa		6.52	□□□□□ -1.37
TRIM16-219	ENST00000580110	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.52	□□□□□ -1.37
TRIM16-219	ENST00000580110		H0Y8G0	127 aa		6.51	□□□□□ -1.37
TRIM16-219	ENST00000580110	TAX1BP3	O14907	124 aa		6.51	□□□□□ -1.37
TRIM16-219	ENST00000580110	ZNF73	O43830	326 aa	Predicted RBP	6.51	□□□□□ -1.37
TRIM16-219	ENST00000580110	SERF1A	O75920	110 aa		6.51	□□□□□ -1.37
TRIM16-219	ENST00000580110	VAMP3	Q15836	100 aa		6.51	□□□□□ -1.37
TRIM16-219	ENST00000580110		Q5XG85	94 aa		6.51	□□□□□ -1.37
TRIM16-219	ENST00000580110	HBD	P02042	147 aa		6.5	□□□□□ -1.37
TRIM16-219	ENST00000580110	BATF	Q16520	125 aa		6.5	□□□□□ -1.37
TRIM16-219	ENST00000580110	LOC107984156	A0A0G2JMH3	177 aa		6.49	□□□□□ -1.37
TRIM16-219	ENST00000580110	SMIM29	Q86T20	159 aa		6.49	□□□□□ -1.37
TRIM16-219	ENST00000580110	ARL17A	Q8IVW1	177 aa		6.49	□□□□□ -1.37
TRIM16-219	ENST00000580110	LINC00846	Q9NV44	126 aa		6.49	□□□□□ -1.37
TRIM16-219	ENST00000580110	MYMX	A0A1B0GTQ4	84 aa		6.48	□□□□□ -1.37
TRIM16-219	ENST00000580110	BVES-AS1	Q5T3Y7	98 aa		6.48	□□□□□ -1.37
TRIM16-219	ENST00000580110		J3QR89	54 aa		6.47	□□□□□ -1.37
TRIM16-219	ENST00000580110	MT1F	P04733	61 aa		6.47	□□□□□ -1.37
TRIM16-219	ENST00000580110	C3orf79	P0CE67	100 aa		6.47	□□□□□ -1.37
TRIM16-219	ENST00000580110	HINT1	P49773	126 aa	Predicted RBP	6.47	□□□□□ -1.37
TRIM16-219	ENST00000580110		Q1RN00	199 aa		6.47	□□□□□ -1.37
TRIM16-219	ENST00000580110	ATP11AUN	Q6ZP68	121 aa		6.47	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms