RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 CCL3L1P16619 93 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 ZNF137PP52743 207 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 CAV3P56539 151 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 FXYD4P59646 89 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 SFTA2Q6UW10 78 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 LRRC37A2A6NM11 1700 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 DLG5Q8TDM6 1919 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 SORL1Q92673 2214 aa1.42□□□□□ -2.18
PTPRM-209ENST00000578698 LRRK2Q5S007 2527 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 HECTD1Q9ULT8 2610 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 TECTAO75443 2155 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 SMG1Q96Q15 3661 aaKnown RBP1.41□□□□□ -2.18
PTPRM-209ENST00000578698 A0A087WVE0 104 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 CTXND1A0A1B0GTU2 59 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 IGKV2-29A2NJV5 120 aaPredicted RBP1.41□□□□□ -2.18
PTPRM-209ENST00000578698 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 LOC730098B7Z3J9 87 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 F8VRH5 84 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 PLNP26678 52 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 CCL18P55774 89 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 SPAG11BQ08648 103 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 DEFB114Q30KQ6 69 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 C10orf113Q5VZT2 155 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 SPAG11AQ6PDA7 123 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 PRR15LQ9BU68 103 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 DNAJC13O75165 2243 aa1.41□□□□□ -2.18
PTPRM-209ENST00000578698 MTORP42345 2549 aa1.4□□□□□ -2.18
PTPRM-209ENST00000578698 TEX15Q9BXT5 2789 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 NCOA6Q14686 2063 aaPredicted RBP1.4□□□□□ -2.19
PTPRM-209ENST00000578698 NBDYA0A0U1RRE5 68 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 UQCR11O14957 56 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 SPINT3P49223 89 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 COX7B2Q8TF08 81 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 R4GMQ9 66 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 DMXL1Q9Y485 3027 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 OTOGLQ3ZCN5 2332 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 DMDP11532 3685 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 ANKRD36A6QL64 1941 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 NAV3Q8IVL0 2385 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 FRYQ5TBA9 3013 aa1.4□□□□□ -2.19
PTPRM-209ENST00000578698 ASCC3Q8N3C0 2202 aaKnown RBP1.39□□□□□ -2.19
PTPRM-209ENST00000578698 ASXL3Q9C0F0 2248 aa1.39□□□□□ -2.19
PTPRM-209ENST00000578698 DUOX1Q9NRD9 1551 aa1.39□□□□□ -2.19
PTPRM-209ENST00000578698 UBR5O95071 2799 aaPredicted RBP1.39□□□□□ -2.19
PTPRM-209ENST00000578698 SETD2Q9BYW2 2564 aaPredicted RBP1.39□□□□□ -2.19
PTPRM-209ENST00000578698 FBN2P35556 2912 aa1.39□□□□□ -2.19
PTPRM-209ENST00000578698 NREPQ16612 68 aa1.39□□□□□ -2.19
PTPRM-209ENST00000578698 SPEGQ15772 3267 aa1.39□□□□□ -2.19
PTPRM-209ENST00000578698 VPS13AQ96RL7 3174 aa1.39□□□□□ -2.19
PTPRM-209ENST00000578698 CEP295Q9C0D2 2601 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 A0A0G2JMZ2 1700 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 DDX60LQ5H9U9 1706 aaKnown RBP1.38□□□□□ -2.19
PTPRM-209ENST00000578698 POLQO75417 2590 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 CFAP46Q8IYW2 2715 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 A0A087WTM6 91 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 TRBV6-1A0A0K0K1D8 114 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 K7EMI3 77 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 MGPP08493 103 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 FXYD3Q14802 87 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 LINC00208Q96KT6 92 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 ITPR1Q14643 2758 aa1.38□□□□□ -2.19
PTPRM-209ENST00000578698 FBN1P35555 2871 aaKnown RBP1.37□□□□□ -2.19
PTPRM-209ENST00000578698 PTPRQQ9UMZ3 2332 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 IGKV2-40A0A087WW87 121 aaPredicted RBP1.37□□□□□ -2.19
PTPRM-209ENST00000578698 TRAV21A0A0B4J279 112 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 IGKV2D-40P01614 121 aaPredicted RBP1.37□□□□□ -2.19
PTPRM-209ENST00000578698 FCER1GP30273 86 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 ENHOQ6UWT2 76 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 C5orf56Q8N8D9 126 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 UBL5Q9BZL1 73 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 LINC00472Q9H8W2 130 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 TRIOO75962 3097 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 ZZEF1O43149 2961 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 SPG11Q96JI7 2443 aa1.37□□□□□ -2.19
PTPRM-209ENST00000578698 LAMA4Q16363 1823 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 ZNF236Q9UL36 1845 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 COL6A6A6NMZ7 2263 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 AHCTF1Q8WYP5 2266 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 DSPP15924 2871 aaKnown RBP1.36□□□□□ -2.19
PTPRM-209ENST00000578698 FREM2Q5SZK8 3169 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 H0Y9P7 68 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 I3L3M4 83 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 LOC400499M0QZD8 3231 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 SPINK7P58062 85 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 ACACAQ13085 2346 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 IGSF10Q6WRI0 2623 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 NOTCH1P46531 2555 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 ABCA1O95477 2261 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 ATRQ13535 2644 aa1.36□□□□□ -2.19
PTPRM-209ENST00000578698 IGF2RP11717 2491 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 URB1O60287 2271 aaKnown RBP1.35□□□□□ -2.19
PTPRM-209ENST00000578698 LINC00959A0A1B0GUT2 108 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 KCNQ1DNQ9H478 68 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 FRYLO94915 3013 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 TLN1Q9Y490 2541 aaKnown RBP1.35□□□□□ -2.19
PTPRM-209ENST00000578698 NBASA2RRP1 2371 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 FLG2Q5D862 2391 aaPredicted RBP1.35□□□□□ -2.19
PTPRM-209ENST00000578698 TNCP24821 2201 aa1.35□□□□□ -2.19
PTPRM-209ENST00000578698 MED13LQ71F56 2210 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms