RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 TNP2Q05952 138 aa2.75□□□□□ -1.97
CDH8-205ENST00000577730 SORL1Q92673 2214 aa2.75□□□□□ -1.97
CDH8-205ENST00000577730 SPRR1AP35321 89 aa2.75□□□□□ -1.97
CDH8-205ENST00000577730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.75□□□□□ -1.97
CDH8-205ENST00000577730 J3QKU1 62 aa2.74□□□□□ -1.97
CDH8-205ENST00000577730 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
CDH8-205ENST00000577730 Q5W150 140 aa2.74□□□□□ -1.97
CDH8-205ENST00000577730 TET2Q6N021 2002 aaPredicted RBP2.74□□□□□ -1.97
CDH8-205ENST00000577730 PCNX1Q96RV3 2341 aa2.73□□□□□ -1.97
CDH8-205ENST00000577730 LRP4O75096 1905 aa2.73□□□□□ -1.97
CDH8-205ENST00000577730 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
CDH8-205ENST00000577730 LTBP2Q14767 1821 aa2.73□□□□□ -1.97
CDH8-205ENST00000577730 SPRR1BP22528 89 aa2.72□□□□□ -1.97
CDH8-205ENST00000577730 MED13LQ71F56 2210 aa2.72□□□□□ -1.97
CDH8-205ENST00000577730 ZNF861PO60384 105 aa2.72□□□□□ -1.97
CDH8-205ENST00000577730 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
CDH8-205ENST00000577730 TECTAO75443 2155 aa2.71□□□□□ -1.97
CDH8-205ENST00000577730 LINC00483Q53H64 154 aa2.71□□□□□ -1.98
CDH8-205ENST00000577730 KRTAP26-1Q6PEX3 210 aa2.71□□□□□ -1.98
CDH8-205ENST00000577730 TYMSOSQ8TAI1 123 aa2.71□□□□□ -1.98
CDH8-205ENST00000577730 CAMK2N1Q7Z7J9 78 aa2.71□□□□□ -1.98
CDH8-205ENST00000577730 WNK1Q9H4A3 2382 aa2.7□□□□□ -1.98
CDH8-205ENST00000577730 A8MUU9 505 aa2.7□□□□□ -1.98
CDH8-205ENST00000577730 CNOT1A5YKK6 2376 aaKnown RBP2.7□□□□□ -1.98
CDH8-205ENST00000577730 ZNF462Q96JM2 2506 aa2.7□□□□□ -1.98
CDH8-205ENST00000577730 ANAPC11Q9NYG5 84 aa2.69□□□□□ -1.98
CDH8-205ENST00000577730 NBDYA0A0U1RRE5 68 aa2.69□□□□□ -1.98
CDH8-205ENST00000577730 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
CDH8-205ENST00000577730 RAI1Q7Z5J4 1906 aaPredicted RBP2.69□□□□□ -1.98
CDH8-205ENST00000577730 CASC10Q5T4H9 136 aa2.69□□□□□ -1.98
CDH8-205ENST00000577730 PSORS1C2Q9UIG4 136 aa2.69□□□□□ -1.98
CDH8-205ENST00000577730 KRTAP10-9P60411 292 aa2.68□□□□□ -1.98
CDH8-205ENST00000577730 PANO1I0J062 215 aa2.67□□□□□ -1.98
CDH8-205ENST00000577730 K7EIL1 84 aa2.66□□□□□ -1.98
CDH8-205ENST00000577730 C9orf92A6NGG3 77 aa2.66□□□□□ -1.98
CDH8-205ENST00000577730 ATRXP46100 2492 aa2.65□□□□□ -1.98
CDH8-205ENST00000577730 LINC00304Q8N9R0 145 aa2.65□□□□□ -1.98
CDH8-205ENST00000577730 MUC4Q99102 2169 aa2.65□□□□□ -1.99
CDH8-205ENST00000577730 NOTCH2NLQ7Z3S9 236 aa2.65□□□□□ -1.99
CDH8-205ENST00000577730 RYR2Q92736 4967 aa2.65□□□□□ -1.99
CDH8-205ENST00000577730 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
CDH8-205ENST00000577730 SPG11Q96JI7 2443 aa2.64□□□□□ -1.99
CDH8-205ENST00000577730 KRTAP11-1Q8IUC1 163 aa2.64□□□□□ -1.99
CDH8-205ENST00000577730 PLAC8Q9NZF1 115 aa2.64□□□□□ -1.99
CDH8-205ENST00000577730 PTPRQQ9UMZ3 2332 aa2.64□□□□□ -1.99
CDH8-205ENST00000577730 SMR3AQ99954 134 aa2.62□□□□□ -1.99
CDH8-205ENST00000577730 PCSK5Q92824 1860 aa2.62□□□□□ -1.99
CDH8-205ENST00000577730 ACACAQ13085 2346 aa2.62□□□□□ -1.99
CDH8-205ENST00000577730 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
CDH8-205ENST00000577730 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.62□□□□□ -1.99
CDH8-205ENST00000577730 NBASA2RRP1 2371 aa2.61□□□□□ -1.99
CDH8-205ENST00000577730 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
CDH8-205ENST00000577730 OTOGLQ3ZCN5 2332 aa2.6□□□□□ -1.99
CDH8-205ENST00000577730 CSPG4Q6UVK1 2322 aa2.6□□□□□ -1.99
CDH8-205ENST00000577730 HIVEP2P31629 2446 aa2.6□□□□□ -1.99
CDH8-205ENST00000577730 A0A087WTM6 91 aa2.59□□□□□ -1.99
CDH8-205ENST00000577730 S4R3F8 94 aa2.59□□□□□ -1.99
CDH8-205ENST00000577730 WWC2-AS2Q96NR7 200 aa2.59□□□□□ -1.99
CDH8-205ENST00000577730 NAV2Q8IVL1 2488 aa2.59□□□□□ -1.99
CDH8-205ENST00000577730 KRTAP17-1Q9BYP8 105 aa2.58□□□□□ -2
CDH8-205ENST00000577730 COL27A1Q8IZC6 1860 aaPredicted RBP2.57□□□□□ -2
CDH8-205ENST00000577730 PLAC4Q8WY50 150 aa2.55□□□□□ -2
CDH8-205ENST00000577730 KRTAP10-11P60412 298 aa2.55□□□□□ -2
CDH8-205ENST00000577730 KRTAP10-3P60369 221 aa2.54□□□□□ -2
CDH8-205ENST00000577730 Q6ZSA8 131 aa2.54□□□□□ -2
CDH8-205ENST00000577730 KRTAP24-1Q3LI83 254 aa2.54□□□□□ -2
CDH8-205ENST00000577730 R4GN34 69 aa2.54□□□□□ -2
CDH8-205ENST00000577730 RIF1Q5UIP0 2472 aaKnown RBP2.54□□□□□ -2
CDH8-205ENST00000577730 MYO9AB2RTY4 2548 aa2.53□□□□□ -2
CDH8-205ENST00000577730 ACACBO00763 2458 aa2.53□□□□□ -2
CDH8-205ENST00000577730 FAM208BQ5VWN6 2430 aa2.53□□□□□ -2
CDH8-205ENST00000577730 ZFHX2Q9C0A1 2572 aaPredicted RBP2.53□□□□□ -2.01
CDH8-205ENST00000577730 C10orf95Q9H7T3 257 aa2.52□□□□□ -2.01
CDH8-205ENST00000577730 M0QZ58 72 aa2.52□□□□□ -2.01
CDH8-205ENST00000577730 P0C880 135 aa2.52□□□□□ -2.01
CDH8-205ENST00000577730 H0YAA0 97 aa2.51□□□□□ -2.01
CDH8-205ENST00000577730 SONP18583 2426 aaKnown RBP2.51□□□□□ -2.01
CDH8-205ENST00000577730 KMT2BQ9UMN6 2715 aaPredicted RBP2.51□□□□□ -2.01
CDH8-205ENST00000577730 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
CDH8-205ENST00000577730 KRTAP7-1Q8IUC3 87 aa2.5□□□□□ -2.01
CDH8-205ENST00000577730 CR1P17927 2039 aa2.49□□□□□ -2.01
CDH8-205ENST00000577730 CACNA1AO00555 2505 aa2.49□□□□□ -2.01
CDH8-205ENST00000577730 ABCA2Q9BZC7 2435 aa2.48□□□□□ -2.01
CDH8-205ENST00000577730 HIVEP3Q5T1R4 2406 aa2.48□□□□□ -2.01
CDH8-205ENST00000577730 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
CDH8-205ENST00000577730 KRTAP13-1Q8IUC0 172 aa2.45□□□□□ -2.02
CDH8-205ENST00000577730 KRTAP1-5Q9BYS1 174 aa2.45□□□□□ -2.02
CDH8-205ENST00000577730 PTPN13Q12923 2485 aa2.45□□□□□ -2.02
CDH8-205ENST00000577730 PIEZO2Q9H5I5 2752 aa2.45□□□□□ -2.02
CDH8-205ENST00000577730 CCDC168Q8NDH2 2452 aa2.44□□□□□ -2.02
CDH8-205ENST00000577730 J3QL48 77 aa2.44□□□□□ -2.02
CDH8-205ENST00000577730 SMR3BP02814 79 aaPredicted RBP2.43□□□□□ -2.02
CDH8-205ENST00000577730 TLN1Q9Y490 2541 aaKnown RBP2.43□□□□□ -2.02
CDH8-205ENST00000577730 NOTCH2Q04721 2471 aa2.43□□□□□ -2.02
CDH8-205ENST00000577730 USP9XQ93008 2570 aaPredicted RBP2.42□□□□□ -2.02
CDH8-205ENST00000577730 PKD1L2Q7Z442 2459 aa2.42□□□□□ -2.02
CDH8-205ENST00000577730 NCOR2Q9Y618 2525 aa2.41□□□□□ -2.02
CDH8-205ENST00000577730 KRTAP1-1Q07627 177 aa2.41□□□□□ -2.02
CDH8-205ENST00000577730 TLN2Q9Y4G6 2542 aa2.41□□□□□ -2.02
CDH8-205ENST00000577730 KRTAP1-3Q8IUG1 177 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms