RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 FXYD2P54710 66 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.3
CDK5RAP3-204ENST00000577664 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CBY1Q9Y3M2 126 aa6.9□□□□□ -1.3
CDK5RAP3-204ENST00000577664 M0R143 59 aa6.89□□□□□ -1.31
CDK5RAP3-204ENST00000577664 SPRR1AP35321 89 aa6.89□□□□□ -1.31
CDK5RAP3-204ENST00000577664 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
CDK5RAP3-204ENST00000577664 TNXBP22105 4242 aa6.89□□□□□ -1.31
CDK5RAP3-204ENST00000577664 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
CDK5RAP3-204ENST00000577664 NCR3O14931 201 aa6.88□□□□□ -1.31
CDK5RAP3-204ENST00000577664 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
CDK5RAP3-204ENST00000577664 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
CDK5RAP3-204ENST00000577664 S100A7L2Q5SY68 101 aa6.87□□□□□ -1.31
CDK5RAP3-204ENST00000577664 RPL37AP8A6NKH3 93 aa6.86□□□□□ -1.31
CDK5RAP3-204ENST00000577664 PRYO14603 147 aa6.86□□□□□ -1.31
CDK5RAP3-204ENST00000577664 HAMPP81172 84 aa6.86□□□□□ -1.31
CDK5RAP3-204ENST00000577664 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
CDK5RAP3-204ENST00000577664 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
CDK5RAP3-204ENST00000577664 TRBV7-6A0A0J9YX20 115 aa6.85□□□□□ -1.31
CDK5RAP3-204ENST00000577664 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
CDK5RAP3-204ENST00000577664 H0Y9J4 135 aa6.85□□□□□ -1.31
CDK5RAP3-204ENST00000577664 HINT1P49773 126 aaPredicted RBP6.85□□□□□ -1.31
CDK5RAP3-204ENST00000577664 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
CDK5RAP3-204ENST00000577664 UBE2BP63146 152 aa6.85□□□□□ -1.31
CDK5RAP3-204ENST00000577664 TRAV23DV6A0A075B6W5 121 aa6.84□□□□□ -1.31
CDK5RAP3-204ENST00000577664 A6NDN8 102 aa6.84□□□□□ -1.31
CDK5RAP3-204ENST00000577664 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
CDK5RAP3-204ENST00000577664 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
CDK5RAP3-204ENST00000577664 OR13C6PQ8NH95 151 aa6.84□□□□□ -1.31
CDK5RAP3-204ENST00000577664 BCE1O60756 84 aa6.83□□□□□ -1.32
CDK5RAP3-204ENST00000577664 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
CDK5RAP3-204ENST00000577664 SMIM11BQ8TCY0 68 aa6.83□□□□□ -1.32
CDK5RAP3-204ENST00000577664 RAB37Q96AX2 223 aa6.83□□□□□ -1.32
CDK5RAP3-204ENST00000577664 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
CDK5RAP3-204ENST00000577664 MUC2Q02817 5179 aa6.83□□□□□ -1.32
CDK5RAP3-204ENST00000577664 ZNF73O43830 326 aaPredicted RBP6.82□□□□□ -1.32
CDK5RAP3-204ENST00000577664 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
CDK5RAP3-204ENST00000577664 RPL13AP40429 203 aaKnown RBP6.81□□□□□ -1.32
CDK5RAP3-204ENST00000577664 B5MCH6 92 aa6.8□□□□□ -1.32
CDK5RAP3-204ENST00000577664 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
CDK5RAP3-204ENST00000577664 RPL37AP61513 92 aaKnown RBP6.8□□□□□ -1.32
CDK5RAP3-204ENST00000577664 SNHG12Q9BXW3 62 aa6.8□□□□□ -1.32
CDK5RAP3-204ENST00000577664 ZNF861PO60384 105 aa6.79□□□□□ -1.32
CDK5RAP3-204ENST00000577664 ELOF1P60002 83 aaKnown RBP6.79□□□□□ -1.32
CDK5RAP3-204ENST00000577664 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
CDK5RAP3-204ENST00000577664 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
CDK5RAP3-204ENST00000577664 DIRC1Q969H9 104 aa6.79□□□□□ -1.32
CDK5RAP3-204ENST00000577664 K7ERJ3 54 aa6.78□□□□□ -1.32
CDK5RAP3-204ENST00000577664 Q6ZRX8 168 aa6.78□□□□□ -1.32
CDK5RAP3-204ENST00000577664 ETDCA0A1B0GVM5 59 aa6.77□□□□□ -1.33
CDK5RAP3-204ENST00000577664 PCP4L1A6NKN8 68 aa6.77□□□□□ -1.33
CDK5RAP3-204ENST00000577664 H0YGX0 51 aa6.77□□□□□ -1.33
CDK5RAP3-204ENST00000577664 TSPAN13O95857 204 aa6.77□□□□□ -1.33
CDK5RAP3-204ENST00000577664 VAMP3Q15836 100 aa6.77□□□□□ -1.33
CDK5RAP3-204ENST00000577664 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
CDK5RAP3-204ENST00000577664 FAM19A1Q7Z5A9 133 aa6.76□□□□□ -1.33
CDK5RAP3-204ENST00000577664 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
CDK5RAP3-204ENST00000577664 COX7BP24311 80 aa6.75□□□□□ -1.33
CDK5RAP3-204ENST00000577664 Q9BRP9 147 aa6.75□□□□□ -1.33
CDK5RAP3-204ENST00000577664 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
CDK5RAP3-204ENST00000577664 A0A1B0GX51 115 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 TAX1BP3O14907 124 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 TRIAP1O43715 76 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 UBE2AP49459 152 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
CDK5RAP3-204ENST00000577664 H7C2G1 150 aa6.73□□□□□ -1.33
CDK5RAP3-204ENST00000577664 COX6CP09669 75 aa6.73□□□□□ -1.33
CDK5RAP3-204ENST00000577664 BATFQ16520 125 aa6.73□□□□□ -1.33
CDK5RAP3-204ENST00000577664 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
CDK5RAP3-204ENST00000577664 PRLHP81277 87 aa6.72□□□□□ -1.33
CDK5RAP3-204ENST00000577664 Q1RN00 199 aa6.72□□□□□ -1.33
CDK5RAP3-204ENST00000577664 PSMB2P49721 201 aa6.7□□□□□ -1.34
CDK5RAP3-204ENST00000577664 hADV29S1A0JD25 119 aa6.69□□□□□ -1.34
CDK5RAP3-204ENST00000577664 SLC25A20O43772 301 aa6.69□□□□□ -1.34
CDK5RAP3-204ENST00000577664 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
CDK5RAP3-204ENST00000577664 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
CDK5RAP3-204ENST00000577664 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
CDK5RAP3-204ENST00000577664 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
CDK5RAP3-204ENST00000577664 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 TRBV20-1A0A075B6N2 111 aa6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 H3BUT2 72 aa6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 SNCGO76070 127 aa6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 SPRR1BP22528 89 aa6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 LINC00483Q53H64 154 aa6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
CDK5RAP3-204ENST00000577664 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 LST1O00453 97 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 TRACP01848 142 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 SCGB1C2P0DMR2 95 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 OCIAD2Q56VL3 154 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 LYRM7Q5U5X0 104 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 ZNF706Q9Y5V0 76 aaPredicted RBP6.66□□□□□ -1.34
CDK5RAP3-204ENST00000577664 PPDPFLQ8WWR9 84 aa6.65□□□□□ -1.34
CDK5RAP3-204ENST00000577664 H3BQ85 93 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms