RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ANK3Q12955 4377 aaKnown RBP-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 ITPR3Q14573 2671 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 DNAH3Q8TD57 4116 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 CCDC141Q6ZP82 1450 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 MAGI2Q86UL8 1455 aa-0.54□□□□□ -2.5
TOP2A-202ENST00000577541 FASNP49327 2511 aaKnown RBP-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 DSPP15924 2871 aaKnown RBP-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 RGPD2P0DJD1 1756 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 CRYBG1Q9Y4K1 1723 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 NBASA2RRP1 2371 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 DMXL1Q9Y485 3027 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 TEP1Q99973 2627 aaKnown RBP-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 HECTD1Q9ULT8 2610 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 DNAH11Q96DT5 4516 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 SPTY2D1-AS1A0A0U1RR47 76 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 LEPROTL1O95214 131 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 HEPN1Q6WQI6 88 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 C9orf62Q8N4C0 152 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 DPY30Q9C005 99 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 UBE2D4Q9Y2X8 147 aa-0.55□□□□□ -2.5
TOP2A-202ENST00000577541 PTPN23Q9H3S7 1636 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 D6R8Y8 96 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 MUSTN1Q8IVN3 82 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 ACBD7Q8N6N7 88 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 ABCC2Q92887 1545 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 KALRNO60229 2985 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 CLTCQ00610 1675 aaKnown RBP-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 ZNF831Q5JPB2 1677 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 COL12A1Q99715 3063 aa-0.56□□□□□ -2.5
TOP2A-202ENST00000577541 TACC2O95359 2948 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 NEXMIFQ5QGS0 1516 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 LRRC7Q96NW7 1537 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 UQCRHLA0A096LP55 91 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 DEFA5Q01523 94 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 USP32Q8NFA0 1604 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 ALKQ9UM73 1620 aa-0.57□□□□□ -2.5
TOP2A-202ENST00000577541 PREX1Q8TCU6 1659 aa-0.58□□□□□ -2.5
TOP2A-202ENST00000577541 FANCAO15360 1455 aa-0.58□□□□□ -2.5
TOP2A-202ENST00000577541 M0R143 59 aa-0.58□□□□□ -2.5
TOP2A-202ENST00000577541 BCORQ6W2J9 1755 aa-0.58□□□□□ -2.5
TOP2A-202ENST00000577541 NIPBLQ6KC79 2804 aaeCLIP-0.58□□□□□ -2.5
TOP2A-202ENST00000577541 QSER1Q2KHR3 1735 aa-0.58□□□□□ -2.5
TOP2A-202ENST00000577541 CUBNO60494 3623 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 CICQ96RK0 1608 aaPredicted RBP-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 AKAP12Q02952 1782 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 COL14A1Q05707 1796 aaKnown RBP-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 USP9XQ93008 2570 aaPredicted RBP-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 NDUFA3O95167 84 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 LINC00032P0C843 101 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 COX7BP24311 80 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 ZNF720Q7Z2F6 126 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 CDKN2A-AS1Q9UH64 79 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 EPRSP07814 1512 aaKnown RBP-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 CELSR3Q9NYQ7 3312 aa-0.59□□□□□ -2.5
TOP2A-202ENST00000577541 MYO3AQ8NEV4 1616 aa-0.6□□□□□ -2.5
TOP2A-202ENST00000577541 ATP10BO94823 1461 aa-0.6□□□□□ -2.5
TOP2A-202ENST00000577541 PKD1L3Q7Z443 1732 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 CLIP1P30622 1438 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 TROQ12816 1431 aaPredicted RBP-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 CEP162Q5TB80 1403 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 VPS8Q8N3P4 1428 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 CCL22O00626 93 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 HMGN3Q15651 99 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 DNAH2Q9P225 4427 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 SCN11AQ9UI33 1791 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 TMEM131LA2VDJ0 1609 aa-0.6□□□□□ -2.51
TOP2A-202ENST00000577541 ATP7BP35670 1465 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 C4AP0C0L4 1744 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 C4BP0C0L5 1744 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 VPS13BQ7Z7G8 4022 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 HMGN2P05204 90 aaKnown RBP-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 NMSQ5H8A3 153 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 MYO18BQ8IUG5 2567 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 KIF20BQ96Q89 1820 aa-0.61□□□□□ -2.51
TOP2A-202ENST00000577541 MYH4Q9Y623 1939 aa-0.62□□□□□ -2.51
TOP2A-202ENST00000577541 BIRC6Q9NR09 4857 aa-0.62□□□□□ -2.51
TOP2A-202ENST00000577541 IQCF6A8MYZ5 107 aa-0.62□□□□□ -2.51
TOP2A-202ENST00000577541 PKIAP61925 76 aa-0.62□□□□□ -2.51
TOP2A-202ENST00000577541 COL6A5A8TX70 2615 aa-0.62□□□□□ -2.51
TOP2A-202ENST00000577541 PDE4DIPQ5VU43 2346 aa-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 SUPT6HQ7KZ85 1726 aaKnown RBP-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 TRAV21A0A0B4J279 112 aa-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 SPRR2FQ96RM1 72 aa-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 RGPD3A6NKT7 1758 aaPredicted RBP-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 RGPD4Q7Z3J3 1758 aa-0.63□□□□□ -2.51
TOP2A-202ENST00000577541 POLR1AO95602 1720 aaPredicted RBP-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 SPG11Q96JI7 2443 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 LRRC9Q6ZRR7 1453 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 GAFA1Q96PS6 74 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 LAMA3Q16787 3333 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 SACSQ9NZJ4 4579 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 LAMA1P25391 3075 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 DOT1LQ8TEK3 1739 aa-0.64□□□□□ -2.51
TOP2A-202ENST00000577541 DNAH1Q9P2D7 4330 aa-0.65□□□□□ -2.51
TOP2A-202ENST00000577541 ALKAL2Q6UX46 152 aa-0.65□□□□□ -2.51
TOP2A-202ENST00000577541 GCN1Q92616 2671 aaKnown RBP-0.65□□□□□ -2.51
TOP2A-202ENST00000577541 TRIOO75962 3097 aa-0.66□□□□□ -2.51
TOP2A-202ENST00000577541 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.66□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms