RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
SMG6-218ENST00000575454 COMMD7Q86VX2 200 aa4.8□□□□□ -1.64
SMG6-218ENST00000575454 LAMTOR3Q9UHA4 124 aa4.8□□□□□ -1.64
SMG6-218ENST00000575454 CFC1P0CG37 223 aa4.79□□□□□ -1.64
SMG6-218ENST00000575454 SPRR1BP22528 89 aa4.79□□□□□ -1.64
SMG6-218ENST00000575454 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
SMG6-218ENST00000575454 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
SMG6-218ENST00000575454 C18orf32Q8TCD1 76 aa4.79□□□□□ -1.64
SMG6-218ENST00000575454 URB1-AS1Q96HZ7 61 aa4.79□□□□□ -1.64
SMG6-218ENST00000575454 Q5XG85 94 aa4.78□□□□□ -1.64
SMG6-218ENST00000575454 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
SMG6-218ENST00000575454 UQCC3Q6UW78 93 aa4.77□□□□□ -1.65
SMG6-218ENST00000575454 IFI27L1Q96BM0 104 aa4.77□□□□□ -1.65
SMG6-218ENST00000575454 PRO1933Q9H354 126 aa4.77□□□□□ -1.65
SMG6-218ENST00000575454 TMEM218A2RU14 115 aa4.76□□□□□ -1.65
SMG6-218ENST00000575454 H7C2G1 150 aa4.76□□□□□ -1.65
SMG6-218ENST00000575454 TRAPPC1Q9Y5R8 145 aa4.76□□□□□ -1.65
SMG6-218ENST00000575454 LEPROTO15243 131 aa4.74□□□□□ -1.65
SMG6-218ENST00000575454 NMUP48645 174 aa4.74□□□□□ -1.65
SMG6-218ENST00000575454 C1orf195Q5TG92 126 aa4.74□□□□□ -1.65
SMG6-218ENST00000575454 CHCHD1Q96BP2 118 aaKnown RBP4.74□□□□□ -1.65
SMG6-218ENST00000575454 AKR1D1P51857 326 aa4.73□□□□□ -1.65
SMG6-218ENST00000575454 RHEBQ15382 184 aa4.73□□□□□ -1.65
SMG6-218ENST00000575454 CLLU1Q5K131 121 aa4.73□□□□□ -1.65
SMG6-218ENST00000575454 Q6Q795 121 aa4.73□□□□□ -1.65
SMG6-218ENST00000575454 J3QQQ9 107 aa4.72□□□□□ -1.65
SMG6-218ENST00000575454 HERVK_113P61574 105 aa4.72□□□□□ -1.65
SMG6-218ENST00000575454 TAL2Q16559 108 aa4.72□□□□□ -1.65
SMG6-218ENST00000575454 TEX49A0A1B0GTD5 131 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 TCL1BO95988 128 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 LGALS3P17931 250 aaKnown RBP4.71□□□□□ -1.66
SMG6-218ENST00000575454 PLNP26678 52 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 TSPEAR-AS2P59090 65 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 ATP11AUNQ6ZP68 121 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 SMIM29Q86T20 159 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 RPS10P5Q9NQ39 176 aa4.71□□□□□ -1.66
SMG6-218ENST00000575454 Q1RN00 199 aa4.7□□□□□ -1.66
SMG6-218ENST00000575454 OR13C6PQ8NH95 151 aa4.7□□□□□ -1.66
SMG6-218ENST00000575454 COX7BP24311 80 aa4.69□□□□□ -1.66
SMG6-218ENST00000575454 C10orf91Q5T1B1 145 aa4.69□□□□□ -1.66
SMG6-218ENST00000575454 DEFB105AQ8NG35 78 aa4.69□□□□□ -1.66
SMG6-218ENST00000575454 SPANXCQ9NY87 97 aa4.69□□□□□ -1.66
SMG6-218ENST00000575454 H0Y8G0 127 aa4.68□□□□□ -1.66
SMG6-218ENST00000575454 ELOF1P60002 83 aaKnown RBP4.68□□□□□ -1.66
SMG6-218ENST00000575454 SOSTDC1Q6X4U4 206 aa4.68□□□□□ -1.66
SMG6-218ENST00000575454 SPANXDQ9BXN6 97 aa4.68□□□□□ -1.66
SMG6-218ENST00000575454 NEBP20929 6669 aa4.67□□□□□ -1.66
SMG6-218ENST00000575454 C20orf202A1L168 122 aa4.67□□□□□ -1.66
SMG6-218ENST00000575454 HSBP1O75506 76 aa4.67□□□□□ -1.66
SMG6-218ENST00000575454 NPC2P61916 151 aa4.67□□□□□ -1.66
SMG6-218ENST00000575454 ADAMTSL4-AS1Q5T5F5 129 aa4.67□□□□□ -1.66
SMG6-218ENST00000575454 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
SMG6-218ENST00000575454 TRBV7-6A0A0J9YX20 115 aa4.66□□□□□ -1.66
SMG6-218ENST00000575454 A0A0J9YXY3 114 aa4.66□□□□□ -1.66
SMG6-218ENST00000575454 DPM2O94777 84 aa4.66□□□□□ -1.66
SMG6-218ENST00000575454 LINC00518Q8N0U6 118 aa4.66□□□□□ -1.66
SMG6-218ENST00000575454 EIF4EBP3O60516 100 aaPredicted RBP4.65□□□□□ -1.67
SMG6-218ENST00000575454 LEPROTL1O95214 131 aa4.65□□□□□ -1.67
SMG6-218ENST00000575454 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
SMG6-218ENST00000575454 Q75L30 129 aa4.65□□□□□ -1.67
SMG6-218ENST00000575454 LINC00308Q8TCZ7 52 aa4.65□□□□□ -1.67
SMG6-218ENST00000575454 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
SMG6-218ENST00000575454 IGKCP01834 107 aa4.64□□□□□ -1.67
SMG6-218ENST00000575454 HSPB8Q9UJY1 196 aa4.64□□□□□ -1.67
SMG6-218ENST00000575454 IGLV5-48A0A075B6I7 105 aa4.63□□□□□ -1.67
SMG6-218ENST00000575454 PCP2Q8IVA1 136 aa4.63□□□□□ -1.67
SMG6-218ENST00000575454 LINC00846Q9NV44 126 aa4.63□□□□□ -1.67
SMG6-218ENST00000575454 A0A1B0GWB2 263 aa4.62□□□□□ -1.67
SMG6-218ENST00000575454 TIMM17BO60830 172 aa4.62□□□□□ -1.67
SMG6-218ENST00000575454 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
SMG6-218ENST00000575454 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
SMG6-218ENST00000575454 A4D1N5 150 aa4.61□□□□□ -1.67
SMG6-218ENST00000575454 E9PLD3 99 aa4.61□□□□□ -1.67
SMG6-218ENST00000575454 F8WEM9 126 aa4.61□□□□□ -1.67
SMG6-218ENST00000575454 NHP2Q9NX24 153 aaKnown RBP4.61□□□□□ -1.67
SMG6-218ENST00000575454 A0A0G2JQZ4 141 aa4.6□□□□□ -1.67
SMG6-218ENST00000575454 LITAFQ99732 161 aa4.6□□□□□ -1.67
SMG6-218ENST00000575454 PMCHL2Q9BQD1 86 aa4.6□□□□□ -1.67
SMG6-218ENST00000575454 SNAPINO95295 136 aa4.59□□□□□ -1.67
SMG6-218ENST00000575454 COPS9Q8WXC6 57 aa4.59□□□□□ -1.67
SMG6-218ENST00000575454 NDUFA5Q16718 116 aa4.58□□□□□ -1.68
SMG6-218ENST00000575454 Q6JHZ5 121 aa4.58□□□□□ -1.68
SMG6-218ENST00000575454 SVBPQ8N300 66 aa4.58□□□□□ -1.68
SMG6-218ENST00000575454 ZNF815PA8K554 130 aa4.57□□□□□ -1.68
SMG6-218ENST00000575454 APOC3P02656 99 aa4.57□□□□□ -1.68
SMG6-218ENST00000575454 MT2AP02795 61 aa4.57□□□□□ -1.68
SMG6-218ENST00000575454 FABP4P15090 132 aa4.57□□□□□ -1.68
SMG6-218ENST00000575454 Q96NJ1 140 aa4.57□□□□□ -1.68
SMG6-218ENST00000575454 TRBV7-7A0A0K0K1E9 115 aa4.56□□□□□ -1.68
SMG6-218ENST00000575454 A6NDN8 102 aa4.56□□□□□ -1.68
SMG6-218ENST00000575454 LCE2BO14633 110 aa4.56□□□□□ -1.68
SMG6-218ENST00000575454 SERF1AO75920 110 aa4.56□□□□□ -1.68
SMG6-218ENST00000575454 TMA7Q9Y2S6 64 aaKnown RBP4.56□□□□□ -1.68
SMG6-218ENST00000575454 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
SMG6-218ENST00000575454 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
SMG6-218ENST00000575454 CLEC2BQ92478 149 aa4.55□□□□□ -1.68
SMG6-218ENST00000575454 YPEL4Q96NS1 127 aa4.55□□□□□ -1.68
SMG6-218ENST00000575454 LST1O00453 97 aa4.54□□□□□ -1.68
SMG6-218ENST00000575454 C20orf166-AS1Q96NR2 134 aa4.54□□□□□ -1.68
SMG6-218ENST00000575454 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms