RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 HERC1Q15751 4861 aa5.74□□□□□ -1.49
NDE1-207ENST00000573203 TRBV30A0A0K0K1B3 111 aa5.73□□□□□ -1.49
NDE1-207ENST00000573203 CKS1BP61024 79 aa5.73□□□□□ -1.49
NDE1-207ENST00000573203 Q6ZRU5 148 aa5.73□□□□□ -1.49
NDE1-207ENST00000573203 C2orf48Q96LS8 159 aa5.73□□□□□ -1.49
NDE1-207ENST00000573203 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
NDE1-207ENST00000573203 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
NDE1-207ENST00000573203 LOC107984640A0A0U1RRK4 108 aa5.72□□□□□ -1.49
NDE1-207ENST00000573203 F8W1H4 67 aa5.72□□□□□ -1.49
NDE1-207ENST00000573203 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
NDE1-207ENST00000573203 OXTP01178 125 aa5.71□□□□□ -1.5
NDE1-207ENST00000573203 LINC00158P58513 81 aa5.71□□□□□ -1.5
NDE1-207ENST00000573203 GAGE2BQ13066 116 aa5.71□□□□□ -1.5
NDE1-207ENST00000573203 SOSTDC1Q6X4U4 206 aa5.71□□□□□ -1.5
NDE1-207ENST00000573203 MIR7-3HGQ8N6C7 128 aa5.71□□□□□ -1.5
NDE1-207ENST00000573203 NDUFC2O95298 119 aa5.7□□□□□ -1.5
NDE1-207ENST00000573203 RPL18AQ02543 176 aaKnown RBP5.7□□□□□ -1.5
NDE1-207ENST00000573203 NAA38Q9BRA0 125 aaKnown RBP5.7□□□□□ -1.5
NDE1-207ENST00000573203 M0QXV9 152 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 COX6CP09669 75 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 RNF151Q2KHN1 245 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 DAND5Q8N907 189 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 LINC01600Q96MT4 127 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
NDE1-207ENST00000573203 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
NDE1-207ENST00000573203 SND1-IT1Q9HBX3 110 aa5.68□□□□□ -1.5
NDE1-207ENST00000573203 A0A0U1RRA0 63 aa5.67□□□□□ -1.5
NDE1-207ENST00000573203 SCGB1C2P0DMR2 95 aa5.67□□□□□ -1.5
NDE1-207ENST00000573203 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
NDE1-207ENST00000573203 C10orf25Q5T742 122 aa5.67□□□□□ -1.5
NDE1-207ENST00000573203 C2orf82Q6UX34 121 aa5.67□□□□□ -1.5
NDE1-207ENST00000573203 UNQ6190/PRO20217Q6UXQ8 127 aa5.67□□□□□ -1.5
NDE1-207ENST00000573203 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 A0A1W2PNN7 141 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 H3BMG7 143 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 PFN2P35080 140 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
NDE1-207ENST00000573203 PSMB2P49721 201 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 NPC2P61916 151 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 C9orf116Q5BN46 136 aaPredicted RBP5.66□□□□□ -1.5
NDE1-207ENST00000573203 C6orf48Q9UBA6 75 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 PRO0461Q9UI25 63 aa5.66□□□□□ -1.5
NDE1-207ENST00000573203 TRIAP1O43715 76 aa5.65□□□□□ -1.5
NDE1-207ENST00000573203 TCL1BO95988 128 aa5.65□□□□□ -1.5
NDE1-207ENST00000573203 RPL13AP40429 203 aaKnown RBP5.65□□□□□ -1.5
NDE1-207ENST00000573203 ATXN8Q156A1 80 aa5.65□□□□□ -1.5
NDE1-207ENST00000573203 Q1RN00 199 aa5.65□□□□□ -1.5
NDE1-207ENST00000573203 Q6ZRP5 223 aa5.65□□□□□ -1.5
NDE1-207ENST00000573203 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
NDE1-207ENST00000573203 TLX1NBP0CAT3 122 aa5.64□□□□□ -1.51
NDE1-207ENST00000573203 GAGE2EQ4V326 116 aa5.64□□□□□ -1.51
NDE1-207ENST00000573203 LINC00337Q8N6G1 96 aa5.64□□□□□ -1.51
NDE1-207ENST00000573203 GAGE2DQ9UEU5 116 aa5.64□□□□□ -1.51
NDE1-207ENST00000573203 H0YGX0 51 aa5.63□□□□□ -1.51
NDE1-207ENST00000573203 LST1O00453 97 aa5.63□□□□□ -1.51
NDE1-207ENST00000573203 PHF5AQ7RTV0 110 aaKnown RBP5.63□□□□□ -1.51
NDE1-207ENST00000573203 NDUFC2-KCTD14E9PQ53 114 aa5.62□□□□□ -1.51
NDE1-207ENST00000573203 H7C2G1 150 aa5.62□□□□□ -1.51
NDE1-207ENST00000573203 SERTAD4-AS1Q5TG53 156 aa5.62□□□□□ -1.51
NDE1-207ENST00000573203 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
NDE1-207ENST00000573203 FAM19A5Q7Z5A7 132 aaPredicted RBP5.62□□□□□ -1.51
NDE1-207ENST00000573203 TMEM126AQ9H061 195 aa5.62□□□□□ -1.51
NDE1-207ENST00000573203 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
NDE1-207ENST00000573203 K7ERU9 68 aa5.61□□□□□ -1.51
NDE1-207ENST00000573203 TRACP01848 142 aa5.61□□□□□ -1.51
NDE1-207ENST00000573203 OCIAD2Q56VL3 154 aa5.61□□□□□ -1.51
NDE1-207ENST00000573203 PSORS1C2Q9UIG4 136 aa5.61□□□□□ -1.51
NDE1-207ENST00000573203 A0A1B0GX51 115 aa5.6□□□□□ -1.51
NDE1-207ENST00000573203 H3BT86 120 aa5.6□□□□□ -1.51
NDE1-207ENST00000573203 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
NDE1-207ENST00000573203 SLC25A20O43772 301 aa5.59□□□□□ -1.51
NDE1-207ENST00000573203 C1orf137Q5JT78 98 aa5.59□□□□□ -1.51
NDE1-207ENST00000573203 REG3GQ6UW15 175 aa5.59□□□□□ -1.51
NDE1-207ENST00000573203 SMIM11BQ8TCY0 68 aa5.59□□□□□ -1.51
NDE1-207ENST00000573203 CBY1Q9Y3M2 126 aa5.59□□□□□ -1.51
NDE1-207ENST00000573203 J3QR89 54 aa5.58□□□□□ -1.52
NDE1-207ENST00000573203 IGLV6-57P01721 117 aa5.58□□□□□ -1.52
NDE1-207ENST00000573203 UBE2BP63146 152 aa5.58□□□□□ -1.52
NDE1-207ENST00000573203 C9orf129Q5T035 196 aaKnown RBP5.58□□□□□ -1.52
NDE1-207ENST00000573203 TEN1Q86WV5 123 aa5.58□□□□□ -1.52
NDE1-207ENST00000573203 ANKRD29Q8N6D5 301 aa5.58□□□□□ -1.52
NDE1-207ENST00000573203 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
NDE1-207ENST00000573203 C9JAW5 83 aa5.57□□□□□ -1.52
NDE1-207ENST00000573203 ETDBQ3ZM63 59 aa5.57□□□□□ -1.52
NDE1-207ENST00000573203 KRTAP7-1Q8IUC3 87 aa5.57□□□□□ -1.52
NDE1-207ENST00000573203 OR13C6PQ8NH95 151 aa5.57□□□□□ -1.52
NDE1-207ENST00000573203 TRBV7-6A0A0J9YX20 115 aa5.56□□□□□ -1.52
NDE1-207ENST00000573203 M0R378 163 aa5.56□□□□□ -1.52
NDE1-207ENST00000573203 CLEC2BQ92478 149 aa5.56□□□□□ -1.52
NDE1-207ENST00000573203 XAGE1AQ9HD64 81 aa5.56□□□□□ -1.52
NDE1-207ENST00000573203 IGLV5-37A0A075B6J1 123 aa5.55□□□□□ -1.52
NDE1-207ENST00000573203 SNCGO76070 127 aa5.55□□□□□ -1.52
NDE1-207ENST00000573203 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
NDE1-207ENST00000573203 VPREB1P12018 145 aa5.55□□□□□ -1.52
NDE1-207ENST00000573203 S100A7L2Q5SY68 101 aa5.55□□□□□ -1.52
NDE1-207ENST00000573203 KRTAP11-1Q8IUC1 163 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms