RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 PKD1L1Q8TDX9 2849 aa5.99□□□□□ -1.45
TVP23A-205ENST00000572428 CHCHD7Q9BUK0 85 aa5.99□□□□□ -1.45
TVP23A-205ENST00000572428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.99□□□□□ -1.45
TVP23A-205ENST00000572428 IGKV2-29A2NJV5 120 aaPredicted RBP5.99□□□□□ -1.45
TVP23A-205ENST00000572428 MUSTN1Q8IVN3 82 aa5.98□□□□□ -1.45
TVP23A-205ENST00000572428 LINC00612Q8N6U2 182 aa5.98□□□□□ -1.45
TVP23A-205ENST00000572428 RPL36ALQ969Q0 106 aaKnown RBP5.98□□□□□ -1.45
TVP23A-205ENST00000572428 ATP5EP2Q5VTU8 51 aa5.98□□□□□ -1.45
TVP23A-205ENST00000572428 B9D2Q9BPU9 175 aa5.97□□□□□ -1.45
TVP23A-205ENST00000572428 A6NED7 52 aa5.97□□□□□ -1.45
TVP23A-205ENST00000572428 RPL37AP8A6NKH3 93 aa5.97□□□□□ -1.45
TVP23A-205ENST00000572428 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
TVP23A-205ENST00000572428 K7EIL1 84 aa5.97□□□□□ -1.45
TVP23A-205ENST00000572428 Q6ZTI0 123 aa5.97□□□□□ -1.45
TVP23A-205ENST00000572428 TSPEAR-AS2P59090 65 aa5.96□□□□□ -1.46
TVP23A-205ENST00000572428 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
TVP23A-205ENST00000572428 NOP10Q9NPE3 64 aaKnown RBP5.96□□□□□ -1.46
TVP23A-205ENST00000572428 C9orf129Q5T035 196 aaKnown RBP5.96□□□□□ -1.46
TVP23A-205ENST00000572428 C14orf132Q9NPU4 83 aa5.96□□□□□ -1.46
TVP23A-205ENST00000572428 TRBV6-4A0A1B0GX49 114 aa5.95□□□□□ -1.46
TVP23A-205ENST00000572428 Q8NAQ8 132 aa5.95□□□□□ -1.46
TVP23A-205ENST00000572428 A0A096LPF7 62 aa5.95□□□□□ -1.46
TVP23A-205ENST00000572428 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
TVP23A-205ENST00000572428 ROMO1P60602 79 aa5.95□□□□□ -1.46
TVP23A-205ENST00000572428 TOMM7Q9P0U1 55 aa5.94□□□□□ -1.46
TVP23A-205ENST00000572428 TRGV2A0A075B6R0 118 aa5.94□□□□□ -1.46
TVP23A-205ENST00000572428 CDC42SE2Q9NRR3 84 aa5.94□□□□□ -1.46
TVP23A-205ENST00000572428 DEFB135Q30KP9 77 aa5.94□□□□□ -1.46
TVP23A-205ENST00000572428 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
TVP23A-205ENST00000572428 DEFB130BP0DP73 79 aa5.93□□□□□ -1.46
TVP23A-205ENST00000572428 DEFB130AP0DP74 79 aa5.93□□□□□ -1.46
TVP23A-205ENST00000572428 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
TVP23A-205ENST00000572428 NBEAL1Q6ZS30 2694 aa5.93□□□□□ -1.46
TVP23A-205ENST00000572428 IGLV5-45A0A087WSX0 123 aa5.93□□□□□ -1.46
TVP23A-205ENST00000572428 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
TVP23A-205ENST00000572428 IGHV3-30-3P0DP02 117 aa5.92□□□□□ -1.46
TVP23A-205ENST00000572428 TRGV4A0A0C4DH28 118 aa5.92□□□□□ -1.46
TVP23A-205ENST00000572428 DEFB4AO15263 64 aa5.92□□□□□ -1.46
TVP23A-205ENST00000572428 IGHV4-28A0A0C4DH34 117 aa5.91□□□□□ -1.46
TVP23A-205ENST00000572428 TRBV6-8A0A0A6YYG3 113 aa5.91□□□□□ -1.46
TVP23A-205ENST00000572428 CRPP02741 224 aa5.91□□□□□ -1.46
TVP23A-205ENST00000572428 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
TVP23A-205ENST00000572428 CLPSL2Q6UWE3 100 aa5.9□□□□□ -1.46
TVP23A-205ENST00000572428 DNHD1Q96M86 4753 aa5.9□□□□□ -1.46
TVP23A-205ENST00000572428 NOTCH1P46531 2555 aa5.9□□□□□ -1.47
TVP23A-205ENST00000572428 ERC2-IT1O76042 136 aa5.9□□□□□ -1.47
TVP23A-205ENST00000572428 A0A0J9YXY3 114 aa5.89□□□□□ -1.47
TVP23A-205ENST00000572428 HTN3P15516 51 aa5.89□□□□□ -1.47
TVP23A-205ENST00000572428 HUWE1Q7Z6Z7 4374 aaKnown RBP5.89□□□□□ -1.47
TVP23A-205ENST00000572428 P0C880 135 aa5.89□□□□□ -1.47
TVP23A-205ENST00000572428 NREPQ16612 68 aa5.89□□□□□ -1.47
TVP23A-205ENST00000572428 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
TVP23A-205ENST00000572428 CHTF8P0CG12 524 aa5.89□□□□□ -1.47
TVP23A-205ENST00000572428 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
TVP23A-205ENST00000572428 OBSCN-AS1Q96MR7 158 aa5.89□□□□□ -1.47
TVP23A-205ENST00000572428 LIMD2Q9BT23 127 aa5.88□□□□□ -1.47
TVP23A-205ENST00000572428 PRB2P02812 416 aaPredicted RBP5.88□□□□□ -1.47
TVP23A-205ENST00000572428 CDKN2A-AS1Q9UH64 79 aa5.88□□□□□ -1.47
TVP23A-205ENST00000572428 DNAH9Q9NYC9 4486 aa5.88□□□□□ -1.47
TVP23A-205ENST00000572428 IGLV5-39A0A0G2JS06 123 aa5.87□□□□□ -1.47
TVP23A-205ENST00000572428 NDUFA1O15239 70 aa5.87□□□□□ -1.47
TVP23A-205ENST00000572428 SPART-AS1P0CW21 52 aa5.87□□□□□ -1.47
TVP23A-205ENST00000572428 LITAFQ99732 161 aa5.86□□□□□ -1.47
TVP23A-205ENST00000572428 PRO0255Q9UI72 69 aa5.86□□□□□ -1.47
TVP23A-205ENST00000572428 COX6A2Q02221 97 aa5.86□□□□□ -1.47
TVP23A-205ENST00000572428 MIAQ16674 131 aa5.86□□□□□ -1.47
TVP23A-205ENST00000572428 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
TVP23A-205ENST00000572428 MGAM2Q2M2H8 2515 aa5.85□□□□□ -1.47
TVP23A-205ENST00000572428 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
TVP23A-205ENST00000572428 Q6ZR54 194 aa5.85□□□□□ -1.47
TVP23A-205ENST00000572428 SMIM1B2RUZ4 78 aa5.84□□□□□ -1.47
TVP23A-205ENST00000572428 HIGD2AQ9BW72 106 aa5.84□□□□□ -1.47
TVP23A-205ENST00000572428 H3BNG1 76 aa5.84□□□□□ -1.47
TVP23A-205ENST00000572428 DHRS4-AS1Q9P1J3 65 aa5.84□□□□□ -1.48
TVP23A-205ENST00000572428 A0A0J9YWU9 116 aa5.83□□□□□ -1.48
TVP23A-205ENST00000572428 LOC101927531A0A1B0GV80 90 aa5.83□□□□□ -1.48
TVP23A-205ENST00000572428 Q8N3U1 123 aa5.83□□□□□ -1.48
TVP23A-205ENST00000572428 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
TVP23A-205ENST00000572428 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
TVP23A-205ENST00000572428 A0A1B0GUV1 79 aa5.82□□□□□ -1.48
TVP23A-205ENST00000572428 IGLV10-54A0A075B6I4 117 aa5.82□□□□□ -1.48
TVP23A-205ENST00000572428 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
TVP23A-205ENST00000572428 Q8NDZ9 215 aa5.81□□□□□ -1.48
TVP23A-205ENST00000572428 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
TVP23A-205ENST00000572428 IGLV4-60A0A075B6I1 120 aa5.8□□□□□ -1.48
TVP23A-205ENST00000572428 PRKDCP78527 4128 aaKnown RBP5.8□□□□□ -1.48
TVP23A-205ENST00000572428 NCR3O14931 201 aa5.8□□□□□ -1.48
TVP23A-205ENST00000572428 LINC00158P58513 81 aa5.8□□□□□ -1.48
TVP23A-205ENST00000572428 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
TVP23A-205ENST00000572428 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
TVP23A-205ENST00000572428 RTL8CO15255 209 aa5.8□□□□□ -1.48
TVP23A-205ENST00000572428 COX7B2Q8TF08 81 aa5.79□□□□□ -1.48
TVP23A-205ENST00000572428 COL7A1Q02388 2944 aa5.79□□□□□ -1.48
TVP23A-205ENST00000572428 TENM3Q9P273 2699 aa5.79□□□□□ -1.48
TVP23A-205ENST00000572428 LINC00308Q8TCZ7 52 aa5.79□□□□□ -1.48
TVP23A-205ENST00000572428 LINC00959A0A1B0GUT2 108 aa5.79□□□□□ -1.48
TVP23A-205ENST00000572428 A8MWP4 228 aa5.79□□□□□ -1.48
TVP23A-205ENST00000572428 IGLV5-52A0A0A0MRZ9 124 aa5.78□□□□□ -1.48
TVP23A-205ENST00000572428 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
TVP23A-205ENST00000572428 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms