RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ATP5EP56381 51 aaPredicted RBP7.12□□□□□ -1.27
CCDC40-207ENST00000572253 SYCNQ0VAF6 134 aa7.12□□□□□ -1.27
CCDC40-207ENST00000572253 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
CCDC40-207ENST00000572253 MGAM2Q2M2H8 2515 aa7.11□□□□□ -1.27
CCDC40-207ENST00000572253 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
CCDC40-207ENST00000572253 MAST4O15021 2626 aa7.11□□□□□ -1.27
CCDC40-207ENST00000572253 Q5XG85 94 aa7.1□□□□□ -1.27
CCDC40-207ENST00000572253 KRTAP26-1Q6PEX3 210 aa7.1□□□□□ -1.27
CCDC40-207ENST00000572253 DEFB105AQ8NG35 78 aa7.1□□□□□ -1.27
CCDC40-207ENST00000572253 PDZD2O15018 2839 aa7.09□□□□□ -1.27
CCDC40-207ENST00000572253 ITPR2Q14571 2701 aa7.09□□□□□ -1.27
CCDC40-207ENST00000572253 Q6ZRP5 223 aa7.09□□□□□ -1.27
CCDC40-207ENST00000572253 ERC2-IT1O76042 136 aa7.09□□□□□ -1.27
CCDC40-207ENST00000572253 FUSP35637 526 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC40-207ENST00000572253 Q6ZTC4 211 aa7.09□□□□□ -1.28
CCDC40-207ENST00000572253 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.28
CCDC40-207ENST00000572253 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
CCDC40-207ENST00000572253 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
CCDC40-207ENST00000572253 C3orf84H3BNL1 204 aa7.08□□□□□ -1.28
CCDC40-207ENST00000572253 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
CCDC40-207ENST00000572253 ESRGQ1W209 222 aa7.08□□□□□ -1.28
CCDC40-207ENST00000572253 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
CCDC40-207ENST00000572253 HELZ2Q9BYK8 2649 aaKnown RBP7.07□□□□□ -1.28
CCDC40-207ENST00000572253 UNC79Q9P2D8 2635 aa7.07□□□□□ -1.28
CCDC40-207ENST00000572253 WIPF1O43516 503 aa7.07□□□□□ -1.28
CCDC40-207ENST00000572253 Q8N9L7 120 aa7.07□□□□□ -1.28
CCDC40-207ENST00000572253 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
CCDC40-207ENST00000572253 C7orf33Q8WU49 177 aa7.07□□□□□ -1.28
CCDC40-207ENST00000572253 EPM2AB3EWF7 344 aa7.06□□□□□ -1.28
CCDC40-207ENST00000572253 ETDCA0A1B0GVM5 59 aa7.06□□□□□ -1.28
CCDC40-207ENST00000572253 A0A1B0GW54 56 aa7.05□□□□□ -1.28
CCDC40-207ENST00000572253 LRCOL1A6NCL2 159 aa7.05□□□□□ -1.28
CCDC40-207ENST00000572253 DEFB131BA0A096LNP1 70 aa7.04□□□□□ -1.28
CCDC40-207ENST00000572253 TEP1Q99973 2627 aaKnown RBP7.04□□□□□ -1.28
CCDC40-207ENST00000572253 Q8N377 158 aa7.04□□□□□ -1.28
CCDC40-207ENST00000572253 VWFP04275 2813 aa7.03□□□□□ -1.28
CCDC40-207ENST00000572253 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
CCDC40-207ENST00000572253 PRYO14603 147 aa7.03□□□□□ -1.28
CCDC40-207ENST00000572253 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
CCDC40-207ENST00000572253 Q6ZRX8 168 aa7.02□□□□□ -1.29
CCDC40-207ENST00000572253 C11orf45Q8TAV5 145 aa7.02□□□□□ -1.29
CCDC40-207ENST00000572253 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
CCDC40-207ENST00000572253 PRR4Q16378 134 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 TENM4Q6N022 2769 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 TLX1NBP0CAT3 122 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 C1orf137Q5JT78 98 aa7.01□□□□□ -1.29
CCDC40-207ENST00000572253 DNAH10OSP0CZ25 163 aa6.99□□□□□ -1.29
CCDC40-207ENST00000572253 BAHCC1Q9P281 2608 aa6.99□□□□□ -1.29
CCDC40-207ENST00000572253 Q8NBF4 154 aa6.99□□□□□ -1.29
CCDC40-207ENST00000572253 UBE2BP63146 152 aa6.98□□□□□ -1.29
CCDC40-207ENST00000572253 IGLV1-50A0A075B6I6 118 aa6.98□□□□□ -1.29
CCDC40-207ENST00000572253 IGLV5-37A0A075B6J1 123 aa6.98□□□□□ -1.29
CCDC40-207ENST00000572253 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
CCDC40-207ENST00000572253 KRTAP10-11P60412 298 aa6.97□□□□□ -1.29
CCDC40-207ENST00000572253 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
CCDC40-207ENST00000572253 A6NED7 52 aa6.96□□□□□ -1.29
CCDC40-207ENST00000572253 Q9BRP9 147 aa6.96□□□□□ -1.29
CCDC40-207ENST00000572253 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.29
CCDC40-207ENST00000572253 HIVEP1P15822 2718 aa6.96□□□□□ -1.3
CCDC40-207ENST00000572253 CHKB-CPT1BH3BT56 60 aa6.96□□□□□ -1.3
CCDC40-207ENST00000572253 PSPHP1O15172 72 aa6.96□□□□□ -1.3
CCDC40-207ENST00000572253 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
CCDC40-207ENST00000572253 HIGD2AQ9BW72 106 aa6.96□□□□□ -1.3
CCDC40-207ENST00000572253 SPRR1AP35321 89 aa6.95□□□□□ -1.3
CCDC40-207ENST00000572253 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
CCDC40-207ENST00000572253 FAM168BA1KXE4 195 aa6.95□□□□□ -1.3
CCDC40-207ENST00000572253 NSD1Q96L73 2696 aaPredicted RBP6.95□□□□□ -1.3
CCDC40-207ENST00000572253 KRTAP4-16G5E9R7 235 aaPredicted RBP6.94□□□□□ -1.3
CCDC40-207ENST00000572253 MP68P56378 58 aa6.94□□□□□ -1.3
CCDC40-207ENST00000572253 TNP2Q05952 138 aa6.94□□□□□ -1.3
CCDC40-207ENST00000572253 LINC00474Q9P2X8 69 aa6.94□□□□□ -1.3
CCDC40-207ENST00000572253 UBE2DNLQ8IWF7 75 aa6.93□□□□□ -1.3
CCDC40-207ENST00000572253 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
CCDC40-207ENST00000572253 LINC00336Q6ZUF6 198 aa6.93□□□□□ -1.3
CCDC40-207ENST00000572253 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
CCDC40-207ENST00000572253 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
CCDC40-207ENST00000572253 PSCAO43653 123 aa6.91□□□□□ -1.3
CCDC40-207ENST00000572253 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
CCDC40-207ENST00000572253 DSCR10P59022 87 aa6.89□□□□□ -1.31
CCDC40-207ENST00000572253 CASC10Q5T4H9 136 aa6.89□□□□□ -1.31
CCDC40-207ENST00000572253 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
CCDC40-207ENST00000572253 K7EQZ3 153 aa6.89□□□□□ -1.31
CCDC40-207ENST00000572253 LINC00476Q8WZB0 136 aa6.89□□□□□ -1.31
CCDC40-207ENST00000572253 LCE6AA0A183 80 aa6.87□□□□□ -1.31
CCDC40-207ENST00000572253 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
CCDC40-207ENST00000572253 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
CCDC40-207ENST00000572253 NDUFB1O75438 58 aa6.84□□□□□ -1.31
CCDC40-207ENST00000572253 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
CCDC40-207ENST00000572253 NOTCH1P46531 2555 aa6.84□□□□□ -1.31
CCDC40-207ENST00000572253 STAB1Q9NY15 2570 aa6.84□□□□□ -1.31
CCDC40-207ENST00000572253 NBEAL1Q6ZS30 2694 aa6.84□□□□□ -1.31
CCDC40-207ENST00000572253 IGKV2-24A0A0C4DH68 120 aa6.84□□□□□ -1.32
CCDC40-207ENST00000572253 hDV103S1A0JD37 113 aa6.83□□□□□ -1.32
CCDC40-207ENST00000572253 KMT2BQ9UMN6 2715 aaPredicted RBP6.83□□□□□ -1.32
CCDC40-207ENST00000572253 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
CCDC40-207ENST00000572253 NDUFS5O43920 106 aa6.83□□□□□ -1.32
CCDC40-207ENST00000572253 UBE2AP49459 152 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms