RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NCR3O14931 201 aa8.56□□□□□ -1.04
RPAIN-209ENST00000571558 CFC1BP0CG36 223 aa8.56□□□□□ -1.04
RPAIN-209ENST00000571558 CFC1P0CG37 223 aa8.56□□□□□ -1.04
RPAIN-209ENST00000571558 LINC00337Q8N6G1 96 aa8.56□□□□□ -1.04
RPAIN-209ENST00000571558 TMEM238LA0A1B0GVL6 79 aa8.55□□□□□ -1.04
RPAIN-209ENST00000571558 A0A1B0GWB2 263 aa8.55□□□□□ -1.04
RPAIN-209ENST00000571558 M0QXV9 152 aa8.55□□□□□ -1.04
RPAIN-209ENST00000571558 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
RPAIN-209ENST00000571558 C7orf33Q8WU49 177 aa8.55□□□□□ -1.04
RPAIN-209ENST00000571558 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
RPAIN-209ENST00000571558 M0R378 163 aa8.54□□□□□ -1.04
RPAIN-209ENST00000571558 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
RPAIN-209ENST00000571558 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
RPAIN-209ENST00000571558 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
RPAIN-209ENST00000571558 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
RPAIN-209ENST00000571558 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
RPAIN-209ENST00000571558 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
RPAIN-209ENST00000571558 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
RPAIN-209ENST00000571558 BATFQ16520 125 aa8.52□□□□□ -1.05
RPAIN-209ENST00000571558 NHP2Q9NX24 153 aaKnown RBP8.52□□□□□ -1.05
RPAIN-209ENST00000571558 TNXBP22105 4242 aa8.51□□□□□ -1.05
RPAIN-209ENST00000571558 TRAV13-2A0A0B4J235 113 aa8.51□□□□□ -1.05
RPAIN-209ENST00000571558 K7ERJ3 54 aa8.51□□□□□ -1.05
RPAIN-209ENST00000571558 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
RPAIN-209ENST00000571558 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
RPAIN-209ENST00000571558 TRBV10-3A0A0K0K1G6 114 aa8.5□□□□□ -1.05
RPAIN-209ENST00000571558 A6NDN8 102 aa8.5□□□□□ -1.05
RPAIN-209ENST00000571558 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
RPAIN-209ENST00000571558 PRO1854Q9UHT4 67 aa8.49□□□□□ -1.05
RPAIN-209ENST00000571558 RPL37AP8A6NKH3 93 aa8.48□□□□□ -1.05
RPAIN-209ENST00000571558 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
RPAIN-209ENST00000571558 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
RPAIN-209ENST00000571558 S100A7L2Q5SY68 101 aa8.48□□□□□ -1.05
RPAIN-209ENST00000571558 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
RPAIN-209ENST00000571558 RAB37Q96AX2 223 aa8.48□□□□□ -1.05
RPAIN-209ENST00000571558 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
RPAIN-209ENST00000571558 LINC01600Q96MT4 127 aa8.46□□□□□ -1.06
RPAIN-209ENST00000571558 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
RPAIN-209ENST00000571558 UBE2BP63146 152 aa8.45□□□□□ -1.06
RPAIN-209ENST00000571558 SMIM11BQ8TCY0 68 aa8.45□□□□□ -1.06
RPAIN-209ENST00000571558 PRYO14603 147 aa8.44□□□□□ -1.06
RPAIN-209ENST00000571558 SPRR1AP35321 89 aa8.44□□□□□ -1.06
RPAIN-209ENST00000571558 KRTAP4-16G5E9R7 235 aaPredicted RBP8.43□□□□□ -1.06
RPAIN-209ENST00000571558 TSPAN13O95857 204 aa8.43□□□□□ -1.06
RPAIN-209ENST00000571558 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
RPAIN-209ENST00000571558 H7C2G1 150 aa8.42□□□□□ -1.06
RPAIN-209ENST00000571558 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
RPAIN-209ENST00000571558 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
RPAIN-209ENST00000571558 A0A1B0GV90 55 aa8.41□□□□□ -1.06
RPAIN-209ENST00000571558 TAX1BP3O14907 124 aa8.41□□□□□ -1.06
RPAIN-209ENST00000571558 ZNF73O43830 326 aaPredicted RBP8.41□□□□□ -1.06
RPAIN-209ENST00000571558 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
RPAIN-209ENST00000571558 C6orf99Q4VX62 202 aa8.4□□□□□ -1.06
RPAIN-209ENST00000571558 TRBV7-6A0A0J9YX20 115 aa8.38□□□□□ -1.07
RPAIN-209ENST00000571558 TRIAP1O43715 76 aa8.38□□□□□ -1.07
RPAIN-209ENST00000571558 BCE1O60756 84 aa8.38□□□□□ -1.07
RPAIN-209ENST00000571558 Q1RN00 199 aa8.38□□□□□ -1.07
RPAIN-209ENST00000571558 DIRC1Q969H9 104 aa8.38□□□□□ -1.07
RPAIN-209ENST00000571558 C9orf118A6NHY6 69 aa8.37□□□□□ -1.07
RPAIN-209ENST00000571558 B5MCH6 92 aa8.37□□□□□ -1.07
RPAIN-209ENST00000571558 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
RPAIN-209ENST00000571558 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
RPAIN-209ENST00000571558 ELOF1P60002 83 aaKnown RBP8.36□□□□□ -1.07
RPAIN-209ENST00000571558 NAA38Q9BRA0 125 aaKnown RBP8.36□□□□□ -1.07
RPAIN-209ENST00000571558 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
RPAIN-209ENST00000571558 H0Y9J4 135 aa8.35□□□□□ -1.07
RPAIN-209ENST00000571558 C1orf137Q5JT78 98 aa8.35□□□□□ -1.07
RPAIN-209ENST00000571558 Q6ZRX8 168 aa8.35□□□□□ -1.07
RPAIN-209ENST00000571558 LOC100996750A0A140TA64 210 aa8.34□□□□□ -1.07
RPAIN-209ENST00000571558 COX7BP24311 80 aa8.34□□□□□ -1.07
RPAIN-209ENST00000571558 PSMB2P49721 201 aa8.34□□□□□ -1.07
RPAIN-209ENST00000571558 FAM19A1Q7Z5A9 133 aa8.34□□□□□ -1.07
RPAIN-209ENST00000571558 KRTAP4-6Q9BYQ5 205 aa8.34□□□□□ -1.07
RPAIN-209ENST00000571558 H3BUT2 72 aa8.33□□□□□ -1.08
RPAIN-209ENST00000571558 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
RPAIN-209ENST00000571558 Q9BRP9 147 aa8.33□□□□□ -1.08
RPAIN-209ENST00000571558 PRLHP81277 87 aa8.32□□□□□ -1.08
RPAIN-209ENST00000571558 VAMP3Q15836 100 aa8.32□□□□□ -1.08
RPAIN-209ENST00000571558 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
RPAIN-209ENST00000571558 H0YGX0 51 aa8.31□□□□□ -1.08
RPAIN-209ENST00000571558 FAM218AQ96MZ4 157 aa8.31□□□□□ -1.08
RPAIN-209ENST00000571558 A0A1W2PPM0 123 aa8.3□□□□□ -1.08
RPAIN-209ENST00000571558 COX6CP09669 75 aa8.3□□□□□ -1.08
RPAIN-209ENST00000571558 UBE2AP49459 152 aa8.3□□□□□ -1.08
RPAIN-209ENST00000571558 LINC00575Q6W349 94 aa8.3□□□□□ -1.08
RPAIN-209ENST00000571558 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
RPAIN-209ENST00000571558 ZNF861PO60384 105 aa8.29□□□□□ -1.08
RPAIN-209ENST00000571558 FABP2P12104 132 aa8.29□□□□□ -1.08
RPAIN-209ENST00000571558 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
RPAIN-209ENST00000571558 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
RPAIN-209ENST00000571558 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
RPAIN-209ENST00000571558 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
RPAIN-209ENST00000571558 ERC2-IT1O76042 136 aa8.28□□□□□ -1.08
RPAIN-209ENST00000571558 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
RPAIN-209ENST00000571558 GTF2H5Q6ZYL4 71 aa8.28□□□□□ -1.08
RPAIN-209ENST00000571558 LYRM7Q5U5X0 104 aa8.27□□□□□ -1.09
RPAIN-209ENST00000571558 LST1O00453 97 aa8.26□□□□□ -1.09
RPAIN-209ENST00000571558 TCL1BO95988 128 aa8.26□□□□□ -1.09
RPAIN-209ENST00000571558 HIGD2AQ9BW72 106 aa8.26□□□□□ -1.09
RPAIN-209ENST00000571558 A0A1B0GX51 115 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms