RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 RBX1P62877 108 aa4.13□□□□□ -1.75
CHD3-213ENST00000571249 KRTAP19-1Q8IUB9 90 aa4.13□□□□□ -1.75
CHD3-213ENST00000571249 ZNF625Q96I27 306 aaPredicted RBP4.13□□□□□ -1.75
CHD3-213ENST00000571249 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
CHD3-213ENST00000571249 LINC00959A0A1B0GUT2 108 aa4.12□□□□□ -1.75
CHD3-213ENST00000571249 A0A1W2PPM0 123 aa4.12□□□□□ -1.75
CHD3-213ENST00000571249 IFITM1P13164 125 aa4.12□□□□□ -1.75
CHD3-213ENST00000571249 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
CHD3-213ENST00000571249 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 TMEM262E9PQX1 116 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 H3BUT2 72 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 K7EP34 96 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 MIAQ16674 131 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 SFTA2Q6UW10 78 aa4.11□□□□□ -1.75
CHD3-213ENST00000571249 K7ERJ3 54 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 CFC1P0CG37 223 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 FABP2P12104 132 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 SS18Q15532 418 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 KRTAP26-1Q6PEX3 210 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 GTF2H5Q6ZYL4 71 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 MUSTN1Q8IVN3 82 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
CHD3-213ENST00000571249 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
CHD3-213ENST00000571249 ANGP03950 147 aaKnown RBP4.09□□□□□ -1.75
CHD3-213ENST00000571249 COPS9Q8WXC6 57 aa4.09□□□□□ -1.75
CHD3-213ENST00000571249 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
CHD3-213ENST00000571249 PRO1854Q9UHT4 67 aa4.09□□□□□ -1.75
CHD3-213ENST00000571249 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
CHD3-213ENST00000571249 A0A096LNI7 61 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 REG3AQ06141 175 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 Q8IZM0 81 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 LINC00269Q8N2A0 174 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 DIRC1Q969H9 104 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 RETNLBQ9BQ08 111 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 SPCS1Q9Y6A9 102 aa4.08□□□□□ -1.76
CHD3-213ENST00000571249 IGLV10-54A0A075B6I4 117 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 TRAV8-4A0A0B4J246 113 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 KIAA0087Q14695 138 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 C1orf137Q5JT78 98 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 LYRM7Q5U5X0 104 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 CLPSL2Q6UWE3 100 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
CHD3-213ENST00000571249 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
CHD3-213ENST00000571249 NAA38Q9BRA0 125 aaKnown RBP4.07□□□□□ -1.76
CHD3-213ENST00000571249 IGKV3OR2-268A0A0C4DH90 116 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 LOC107984156A0A0G2JMH3 177 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 COX7A2LO14548 114 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 APOMO95445 188 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 CXCL5P42830 114 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 XCL1P47992 114 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 SOSTDC1Q6X4U4 206 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 C5orf38Q86SI9 138 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 ARL17AQ8IVW1 177 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 ERG28Q9UKR5 140 aa4.06□□□□□ -1.76
CHD3-213ENST00000571249 TRBV20-1A0A075B6N2 111 aa4.05□□□□□ -1.76
CHD3-213ENST00000571249 H0Y9J4 135 aa4.05□□□□□ -1.76
CHD3-213ENST00000571249 M0QXV9 152 aa4.05□□□□□ -1.76
CHD3-213ENST00000571249 MEIG1Q5JSS6 88 aa4.05□□□□□ -1.76
CHD3-213ENST00000571249 LINC00474Q9P2X8 69 aa4.05□□□□□ -1.76
CHD3-213ENST00000571249 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
CHD3-213ENST00000571249 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
CHD3-213ENST00000571249 F8W1H4 67 aa4.04□□□□□ -1.76
CHD3-213ENST00000571249 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
CHD3-213ENST00000571249 COX17Q14061 63 aa4.04□□□□□ -1.76
CHD3-213ENST00000571249 TOMM7Q9P0U1 55 aa4.04□□□□□ -1.76
CHD3-213ENST00000571249 IGLV7-46A0A075B6I9 117 aa4.03□□□□□ -1.76
CHD3-213ENST00000571249 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
CHD3-213ENST00000571249 MIR7-3HGQ8N6C7 128 aa4.03□□□□□ -1.76
CHD3-213ENST00000571249 DAND5Q8N907 189 aa4.03□□□□□ -1.76
CHD3-213ENST00000571249 H3BMG7 143 aa4.02□□□□□ -1.77
CHD3-213ENST00000571249 TCL1BO95988 128 aa4.02□□□□□ -1.77
CHD3-213ENST00000571249 ASB16-AS1Q495Z4 193 aa4.02□□□□□ -1.77
CHD3-213ENST00000571249 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
CHD3-213ENST00000571249 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
CHD3-213ENST00000571249 IGKV2-28A0A075B6P5 120 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 TRAV13-2A0A0B4J235 113 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 M0R2T5 61 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 NDUFC2O95298 119 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 IGKV2D-28P01615 120 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 LINC00158P58513 81 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 CKS1BP61024 79 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 C15orf56Q8N910 161 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 SND1-IT1Q9HBX3 110 aa4.01□□□□□ -1.77
CHD3-213ENST00000571249 A0A1W2PNN7 141 aa4□□□□□ -1.77
CHD3-213ENST00000571249 COX6CP09669 75 aa4□□□□□ -1.77
CHD3-213ENST00000571249 SCGB1C2P0DMR2 95 aa4□□□□□ -1.77
CHD3-213ENST00000571249 RPL28P46779 137 aaKnown RBP4□□□□□ -1.77
CHD3-213ENST00000571249 PSMB2P49721 201 aa4□□□□□ -1.77
CHD3-213ENST00000571249 NPC2P61916 151 aa4□□□□□ -1.77
CHD3-213ENST00000571249 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
CHD3-213ENST00000571249 SPAG11BQ08648 103 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms