RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 TNXBP22105 4242 aa5.35□□□□□ -1.55
NPLOC4-204ENST00000570324 A0A1B0GV72 72 aa5.35□□□□□ -1.55
NPLOC4-204ENST00000570324 UBE2AP49459 152 aa5.35□□□□□ -1.55
NPLOC4-204ENST00000570324 RPL24P83731 157 aaKnown RBP5.35□□□□□ -1.55
NPLOC4-204ENST00000570324 PRR4Q16378 134 aa5.34□□□□□ -1.55
NPLOC4-204ENST00000570324 TMEM170BQ5T4T1 132 aa5.34□□□□□ -1.55
NPLOC4-204ENST00000570324 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
NPLOC4-204ENST00000570324 PRO0461Q9UI25 63 aa5.34□□□□□ -1.55
NPLOC4-204ENST00000570324 IGKV2-28A0A075B6P5 120 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 ZNF815PA8K554 130 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 IGKV2D-28P01615 120 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 CRYGAP11844 174 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 PLEKHB2Q96CS7 222 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 ERG28Q9UKR5 140 aa5.33□□□□□ -1.56
NPLOC4-204ENST00000570324 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 A0A0B4J2C4 111 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 TSPAN13O95857 204 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 COX17Q14061 63 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 SFTA2Q6UW10 78 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 SCGB1D4Q6XE38 83 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 ZNF625Q96I27 306 aaPredicted RBP5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 PPDPFQ9H3Y8 114 aa5.32□□□□□ -1.56
NPLOC4-204ENST00000570324 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
NPLOC4-204ENST00000570324 LEPROTO15243 131 aa5.31□□□□□ -1.56
NPLOC4-204ENST00000570324 TEN1Q86WV5 123 aa5.31□□□□□ -1.56
NPLOC4-204ENST00000570324 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
NPLOC4-204ENST00000570324 SND1-IT1Q9HBX3 110 aa5.31□□□□□ -1.56
NPLOC4-204ENST00000570324 LINC00158P58513 81 aa5.3□□□□□ -1.56
NPLOC4-204ENST00000570324 ETDBQ3ZM63 59 aa5.3□□□□□ -1.56
NPLOC4-204ENST00000570324 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
NPLOC4-204ENST00000570324 TTTY13Q9BZ97 58 aa5.3□□□□□ -1.56
NPLOC4-204ENST00000570324 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
NPLOC4-204ENST00000570324 A0A087X002 238 aa5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 A0A0J9YXY3 114 aa5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 J3QQQ9 107 aa5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 K7ERJ3 54 aa5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 TIMM17BO60830 172 aa5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 LGALS3P17931 250 aaKnown RBP5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 COPS9Q8WXC6 57 aa5.29□□□□□ -1.56
NPLOC4-204ENST00000570324 LRP2P98164 4655 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 TMEM223A0PJW6 202 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 VPREB1P12018 145 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 IFITM1P13164 125 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 PRLHP81277 87 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 NAA38Q9BRA0 125 aaKnown RBP5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
NPLOC4-204ENST00000570324 A0A0U1RRA0 63 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 CFC1BP0CG36 223 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 CFC1P0CG37 223 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 SCGB1C2P0DMR2 95 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 MEIG1Q5JSS6 88 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 Q6Q795 121 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 SPANXCQ9NY87 97 aa5.27□□□□□ -1.57
NPLOC4-204ENST00000570324 COX6CP09669 75 aa5.26□□□□□ -1.57
NPLOC4-204ENST00000570324 KRTAP13-1Q8IUC0 172 aa5.26□□□□□ -1.57
NPLOC4-204ENST00000570324 HIGD2AQ9BW72 106 aa5.26□□□□□ -1.57
NPLOC4-204ENST00000570324 LOC107984156A0A0G2JMH3 177 aa5.25□□□□□ -1.57
NPLOC4-204ENST00000570324 M0R378 163 aa5.25□□□□□ -1.57
NPLOC4-204ENST00000570324 ATXN8Q156A1 80 aa5.25□□□□□ -1.57
NPLOC4-204ENST00000570324 ARL17AQ8IVW1 177 aa5.25□□□□□ -1.57
NPLOC4-204ENST00000570324 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
NPLOC4-204ENST00000570324 FAM240AA0A1B0GVK7 77 aa5.24□□□□□ -1.57
NPLOC4-204ENST00000570324 H3BT86 120 aa5.24□□□□□ -1.57
NPLOC4-204ENST00000570324 PSMB2P49721 201 aa5.24□□□□□ -1.57
NPLOC4-204ENST00000570324 SMCPP49901 116 aaPredicted RBP5.24□□□□□ -1.57
NPLOC4-204ENST00000570324 HERV-K104P63124 156 aa5.24□□□□□ -1.57
NPLOC4-204ENST00000570324 TRBV10-2A0A0K0K1G8 114 aa5.23□□□□□ -1.57
NPLOC4-204ENST00000570324 SLC25A20O43772 301 aa5.23□□□□□ -1.57
NPLOC4-204ENST00000570324 TCL1BO95988 128 aa5.23□□□□□ -1.57
NPLOC4-204ENST00000570324 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
NPLOC4-204ENST00000570324 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
NPLOC4-204ENST00000570324 A4D1N5 150 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 ACYP1P07311 99 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 MIR7-3HGQ8N6C7 128 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 ANKRD29Q8N6D5 301 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 Q8NDZ9 215 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 NDUFA12Q9UI09 145 aa5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 ZNF706Q9Y5V0 76 aaPredicted RBP5.22□□□□□ -1.57
NPLOC4-204ENST00000570324 A0A0U1RQV1 116 aa5.21□□□□□ -1.58
NPLOC4-204ENST00000570324 ETDCA0A1B0GVM5 59 aa5.21□□□□□ -1.58
NPLOC4-204ENST00000570324 PRYO14603 147 aa5.21□□□□□ -1.58
NPLOC4-204ENST00000570324 NCR3O14931 201 aa5.21□□□□□ -1.58
NPLOC4-204ENST00000570324 C4orf48Q5BLP8 95 aa5.21□□□□□ -1.58
NPLOC4-204ENST00000570324 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
NPLOC4-204ENST00000570324 MUSTN1Q8IVN3 82 aa5.2□□□□□ -1.58
NPLOC4-204ENST00000570324 IMUPQ9GZP8 106 aa5.2□□□□□ -1.58
NPLOC4-204ENST00000570324 LPAP08519 4548 aa5.19□□□□□ -1.58
NPLOC4-204ENST00000570324 SPAG11AQ6PDA7 123 aa5.19□□□□□ -1.58
NPLOC4-204ENST00000570324 C3orf22Q8N5N4 141 aa5.19□□□□□ -1.58
NPLOC4-204ENST00000570324 SPRR4Q96PI1 79 aa5.19□□□□□ -1.58
NPLOC4-204ENST00000570324 LITAFQ99732 161 aa5.19□□□□□ -1.58
NPLOC4-204ENST00000570324 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
NPLOC4-204ENST00000570324 IGLV7-46A0A075B6I9 117 aa5.18□□□□□ -1.58
NPLOC4-204ENST00000570324 TRBV10-3A0A0K0K1G6 114 aa5.18□□□□□ -1.58
NPLOC4-204ENST00000570324 LINC00337Q8N6G1 96 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms