RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 LRP2P98164 4655 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 NDUFA5Q16718 116 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 BAGE3Q86Y29 109 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 SMIM20Q8N5G0 67 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 Q8NBF4 154 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 ERG28Q9UKR5 140 aa2.76□□□□□ -1.97
HERPUD1-213ENST00000568358 LINC00587B1AMM8 73 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 LINC00158P58513 81 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 CXCL6P80162 114 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 FAM229BQ4G0N7 80 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 COA6Q5JTJ3 125 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 ZNF625Q96I27 306 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 SND1-IT1Q9HBX3 110 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 RBM12B-AS1Q9P1G2 102 aa2.75□□□□□ -1.97
HERPUD1-213ENST00000568358 TSTD3H0UI37 97 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 APOC3P02656 99 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 ZNF22P17026 224 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 HERVK_113P61574 105 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 PMCHL1Q16048 86 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 C10orf91Q5T1B1 145 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 SCGB1D4Q6XE38 83 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 SVBPQ8N300 66 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 LINC00304Q8N9R0 145 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 C18orf32Q8TCD1 76 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 TMEM126AQ9H061 195 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 ANAPC11Q9NYG5 84 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 DHRS4-AS1Q9P1J3 65 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 ZNF706Q9Y5V0 76 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
HERPUD1-213ENST00000568358 C11orf86A6NJI1 115 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 M0R378 163 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 SCO1O75880 301 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 PSMB2P49721 201 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 PRLHP81277 87 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 MEIG1Q5JSS6 88 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 SPAG11AQ6PDA7 123 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 IFI27L1Q96BM0 104 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 CHCHD1Q96BP2 118 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 HIGD2AQ9BW72 106 aa2.73□□□□□ -1.97
HERPUD1-213ENST00000568358 IGLV7-46A0A075B6I9 117 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 TRAV12-1A0A0B4J245 112 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 MYMXA0A1B0GTQ4 84 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 TMEM223A0PJW6 202 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 SERF1AO75920 110 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 S100A1P23297 94 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 PLEKHB2Q96CS7 222 aa2.72□□□□□ -1.97
HERPUD1-213ENST00000568358 A0A096LNJ9 63 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 ETDCA0A1B0GVM5 59 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 SMIM13P0DJ93 91 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 BATFQ16520 125 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 KRTAP13-2Q52LG2 175 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 OR13C6PQ8NH95 151 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 RETNLBQ9BQ08 111 aa2.71□□□□□ -1.98
HERPUD1-213ENST00000568358 LPAP08519 4548 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 NCR3O14931 201 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 Q8N377 158 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 MIR7-3HGQ8N6C7 128 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 LITAFQ99732 161 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 MIEN1Q9BRT3 115 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 NDUFA12Q9UI09 145 aa2.7□□□□□ -1.98
HERPUD1-213ENST00000568358 LEPROTO15243 131 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 LEPROTL1O95214 131 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 SPINK1P00995 79 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 LGALS3P17931 250 aaKnown RBP2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 PLNP26678 52 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 HINT1P49773 126 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 JOSD1Q15040 202 aaPredicted RBP2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 TPRXLQ17RH7 258 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 KRTAP15-1Q3LI76 137 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 S100A7L2Q5SY68 101 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 FAM19A2Q8N3H0 131 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 C3orf22Q8N5N4 141 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 SMCR5Q8TEV8 140 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 SPRR4Q96PI1 79 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 KCNQ1DNQ9H478 68 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 HSPB8Q9UJY1 196 aa2.69□□□□□ -1.98
HERPUD1-213ENST00000568358 TRBV10-3A0A0K0K1G6 114 aa2.68□□□□□ -1.98
HERPUD1-213ENST00000568358 FAM236DA0A1B0GTK5 79 aa2.68□□□□□ -1.98
HERPUD1-213ENST00000568358 FAM236CP0DP71 79 aa2.68□□□□□ -1.98
HERPUD1-213ENST00000568358 NMUP48645 174 aa2.68□□□□□ -1.98
HERPUD1-213ENST00000568358 FP248Q71RG6 208 aaPredicted RBP2.68□□□□□ -1.98
HERPUD1-213ENST00000568358 Q8NDZ9 215 aa2.68□□□□□ -1.98
HERPUD1-213ENST00000568358 TRBV10-2A0A0K0K1G8 114 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 J3QQQ9 107 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 DPM2O94777 84 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 IGKCP01834 107 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 TRGC2P03986 189 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 FABP4P15090 132 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 SPRR1AP35321 89 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 MP68P56378 58 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 SSBP3-AS1Q7Z2R9 100 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 SS18L2Q9UHA2 77 aa2.67□□□□□ -1.98
HERPUD1-213ENST00000568358 LOC107984156A0A0G2JMH3 177 aa2.66□□□□□ -1.98
HERPUD1-213ENST00000568358 A0A0J9YXY3 114 aa2.66□□□□□ -1.98
HERPUD1-213ENST00000568358 SLC25A20O43772 301 aa2.66□□□□□ -1.98
HERPUD1-213ENST00000568358 NDUFC2O95298 119 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms