RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635		K7ERJ3	54 aa		4.25	□□□□□ -1.73
SF3B3-209	ENST00000567635		M0QXV9	152 aa		4.25	□□□□□ -1.73
SF3B3-209	ENST00000567635	KRTAP10-8	P60410	259 aa		4.25	□□□□□ -1.73
SF3B3-209	ENST00000567635	C1orf137	Q5JT78	98 aa		4.25	□□□□□ -1.73
SF3B3-209	ENST00000567635	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.25	□□□□□ -1.73
SF3B3-209	ENST00000567635	TRBV20-1	A0A075B6N2	111 aa		4.24	□□□□□ -1.73
SF3B3-209	ENST00000567635	TINCR	A0A1B0GVN0	87 aa		4.24	□□□□□ -1.73
SF3B3-209	ENST00000567635	PLN	P26678	52 aa		4.24	□□□□□ -1.73
SF3B3-209	ENST00000567635	C9orf129	Q5T035	196 aa	Known RBP	4.24	□□□□□ -1.73
SF3B3-209	ENST00000567635	KRTAP7-1	Q8IUC3	87 aa		4.24	□□□□□ -1.73
SF3B3-209	ENST00000567635	PCP2	Q8IVA1	136 aa		4.24	□□□□□ -1.73
SF3B3-209	ENST00000567635	CCDC179	H3BU77	68 aa		4.23	□□□□□ -1.73
SF3B3-209	ENST00000567635	IGLV7-43	P04211	117 aa		4.23	□□□□□ -1.73
SF3B3-209	ENST00000567635	MEIG1	Q5JSS6	88 aa		4.23	□□□□□ -1.73
SF3B3-209	ENST00000567635	KRTAP11-1	Q8IUC1	163 aa		4.23	□□□□□ -1.73
SF3B3-209	ENST00000567635	OR13C6P	Q8NH95	151 aa		4.23	□□□□□ -1.73
SF3B3-209	ENST00000567635	COX7B2	Q8TF08	81 aa		4.23	□□□□□ -1.73
SF3B3-209	ENST00000567635	IGLV5-45	A0A087WSX0	123 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635	SMIM1	B2RUZ4	78 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635		J3KT08	172 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635	CXCL5	P42830	114 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635	UBE2B	P63146	152 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635	DIRC1	Q969H9	104 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635	HIST1H4G	Q99525	98 aa		4.22	□□□□□ -1.73
SF3B3-209	ENST00000567635		A0A1B0GX51	115 aa		4.21	□□□□□ -1.74
SF3B3-209	ENST00000567635	C11orf86	A6NJI1	115 aa		4.21	□□□□□ -1.74
SF3B3-209	ENST00000567635	SCGB1C2	P0DMR2	95 aa		4.21	□□□□□ -1.74
SF3B3-209	ENST00000567635	PSMB2	P49721	201 aa		4.21	□□□□□ -1.74
SF3B3-209	ENST00000567635	XAGE1A	Q9HD64	81 aa		4.21	□□□□□ -1.74
SF3B3-209	ENST00000567635	IGKV2D-26	A0A0A0MRZ7	120 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	MYMX	A0A1B0GTQ4	84 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635		H0Y9J4	135 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	HERVK_113	P61574	105 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	TMEM170B	Q5T4T1	132 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	PPDPF	Q9H3Y8	114 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	C22orf24	Q9Y442	160 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	FAT3	Q8TDW7	4589 aa		4.2	□□□□□ -1.74
SF3B3-209	ENST00000567635	TMEM223	A0PJW6	202 aa		4.19	□□□□□ -1.74
SF3B3-209	ENST00000567635	ZNF22	P17026	224 aa	Predicted RBP	4.19	□□□□□ -1.74
SF3B3-209	ENST00000567635	RPS28	P62857	69 aa	Known RBP	4.19	□□□□□ -1.74
SF3B3-209	ENST00000567635	LOC107984156	A0A0G2JMH3	177 aa		4.18	□□□□□ -1.74
SF3B3-209	ENST00000567635	LEPROT	O15243	131 aa		4.18	□□□□□ -1.74
SF3B3-209	ENST00000567635	MRPL55	Q7Z7F7	128 aa	Known RBP	4.18	□□□□□ -1.74
SF3B3-209	ENST00000567635	ARL17A	Q8IVW1	177 aa		4.18	□□□□□ -1.74
SF3B3-209	ENST00000567635	ANKRD29	Q8N6D5	301 aa		4.18	□□□□□ -1.74
SF3B3-209	ENST00000567635	PRR26	Q8N8Z3	221 aa		4.18	□□□□□ -1.74
SF3B3-209	ENST00000567635	IGLV1-50	A0A075B6I6	118 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	IGLV5-39	A0A0G2JS06	123 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	RPL37AP8	A6NKH3	93 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	SLC25A20	O43772	301 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	ZNF861P	O60384	105 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	PLEKHB2	Q96CS7	222 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	LINC00167	Q96N53	147 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	IMUP	Q9GZP8	106 aa		4.17	□□□□□ -1.74
SF3B3-209	ENST00000567635	IGLV5-37	A0A075B6J1	123 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	TRBV7-7	A0A0K0K1E9	115 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	FAM240A	A0A1B0GVK7	77 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635		C9JAW5	83 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635		J3QQQ9	107 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	UQCRQ	O14949	82 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	PFN2	P35080	140 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	RPL13A	P40429	203 aa	Known RBP	4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	COX17	Q14061	63 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	C9orf153	Q5TBE3	101 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	NKAPP1	Q8N9T2	125 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	TTTY13	Q9BZ97	58 aa		4.16	□□□□□ -1.74
SF3B3-209	ENST00000567635	ZNF815P	A8K554	130 aa		4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635		H3BS24	57 aa		4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	BCE1	O60756	84 aa		4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	TCL1B	O95988	128 aa		4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	KRTAP1-4	P0C5Y4	121 aa		4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	LGALS3	P17931	250 aa	Known RBP	4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	RPL28	P46779	137 aa	Known RBP	4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	C3orf22	Q8N5N4	141 aa		4.15	□□□□□ -1.75
SF3B3-209	ENST00000567635	ACYP1	P07311	99 aa		4.14	□□□□□ -1.75
SF3B3-209	ENST00000567635	TSPEAR-AS2	P59090	65 aa		4.14	□□□□□ -1.75
SF3B3-209	ENST00000567635	ATXN8	Q156A1	80 aa		4.14	□□□□□ -1.75
SF3B3-209	ENST00000567635	SFTA2	Q6UW10	78 aa		4.14	□□□□□ -1.75
SF3B3-209	ENST00000567635	ZNF625	Q96I27	306 aa	Predicted RBP	4.14	□□□□□ -1.75
SF3B3-209	ENST00000567635	SND1-IT1	Q9HBX3	110 aa		4.14	□□□□□ -1.75
SF3B3-209	ENST00000567635	SCGB1D4	Q6XE38	83 aa		4.13	□□□□□ -1.75
SF3B3-209	ENST00000567635	NDUFA12	Q9UI09	145 aa		4.13	□□□□□ -1.75
SF3B3-209	ENST00000567635	TNXB	P22105	4242 aa		4.13	□□□□□ -1.75
SF3B3-209	ENST00000567635	HMCN2	Q8NDA2	5059 aa		4.13	□□□□□ -1.75
SF3B3-209	ENST00000567635	TRBV10-2	A0A0K0K1G8	114 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635		H3BT86	120 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635	VPREB1	P12018	145 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635	UBE2A	P49459	152 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635	LINC00158	P58513	81 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635	KRTAP4-8	Q9BYQ9	185 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635	PRO1854	Q9UHT4	67 aa		4.12	□□□□□ -1.75
SF3B3-209	ENST00000567635	IGKV2-28	A0A075B6P5	120 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635		A0A0J9YXY3	114 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635	TIMM17B	O60830	172 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635	IGKV2D-28	P01615	120 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635	CRYGA	P11844	174 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635	TMEM258	P61165	79 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635	GAGE2A	Q6NT46	116 aa		4.11	□□□□□ -1.75
SF3B3-209	ENST00000567635		A0A0B4J2C4	111 aa		4.1	□□□□□ -1.75
SF3B3-209	ENST00000567635	FAM236A	A0A1B0GUQ0	79 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms