RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
LPCAT2-208ENST00000566915 DEFB116Q30KQ4 102 aa2.91□□□□□ -1.94
LPCAT2-208ENST00000566915 LAMA2P24043 3122 aaKnown RBP2.91□□□□□ -1.94
LPCAT2-208ENST00000566915 MRPL34Q9BQ48 92 aaKnown RBP2.91□□□□□ -1.94
LPCAT2-208ENST00000566915 ANKRD17O75179 2603 aaKnown RBP2.9□□□□□ -1.94
LPCAT2-208ENST00000566915 CD164Q04900 197 aa2.9□□□□□ -1.94
LPCAT2-208ENST00000566915 PRR15Q8IV56 129 aa2.9□□□□□ -1.94
LPCAT2-208ENST00000566915 EPM2AB3EWF7 344 aa2.9□□□□□ -1.95
LPCAT2-208ENST00000566915 C7orf65Q6ZTY9 151 aa2.9□□□□□ -1.95
LPCAT2-208ENST00000566915 HELZ2Q9BYK8 2649 aaKnown RBP2.9□□□□□ -1.95
LPCAT2-208ENST00000566915 LINC00313P59037 77 aa2.9□□□□□ -1.95
LPCAT2-208ENST00000566915 LINC00336Q6ZUF6 198 aa2.9□□□□□ -1.95
LPCAT2-208ENST00000566915 UQCR11O14957 56 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 SSBP3-AS1Q7Z2R9 100 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 K7EIL1 84 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 COA5Q86WW8 74 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 SPEGQ15772 3267 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 ABCA12Q86UK0 2595 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 IGLV5-48A0A075B6I7 105 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 K7EQZ3 153 aa2.89□□□□□ -1.95
LPCAT2-208ENST00000566915 IGLV5-37A0A075B6J1 123 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 BSNQ9UPA5 3926 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 CEP350Q5VT06 3117 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 NBDYA0A0U1RRE5 68 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 ZFHX3Q15911 3703 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 IGKV2-30P06310 120 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 LINC00588Q9Y4M8 146 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 ZNF292O60281 2723 aa2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 FLNBO75369 2602 aaKnown RBP2.88□□□□□ -1.95
LPCAT2-208ENST00000566915 USP9YO00507 2555 aaPredicted RBP2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 EIF4EBP3O60516 100 aaPredicted RBP2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 Q8N377 158 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 ST20-AS1Q8NBB2 130 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 C19orf73Q9NVV2 129 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 IGFL1Q6UW32 110 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 A8MUN3 132 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 FN1P02751 2386 aaKnown RBP2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 HECTD1Q9ULT8 2610 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 SPINK1P00995 79 aa2.87□□□□□ -1.95
LPCAT2-208ENST00000566915 A0A1B0GVX0 72 aa2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 Q1T7F1 81 aa2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 SERTAD4-AS1Q5TG53 156 aa2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 C15orf56Q8N910 161 aa2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 TNRC18O15417 2968 aaPredicted RBP2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 GIG44P09565 113 aaPredicted RBP2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
LPCAT2-208ENST00000566915 LCE2CQ5TA81 110 aa2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 TLN2Q9Y4G6 2542 aa2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 CHD9Q3L8U1 2897 aa2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 RTL8CO15255 209 aa2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 CNBPP62633 177 aaKnown RBP2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 LCA10Q71F78 164 aa2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 SPRR4Q96PI1 79 aa2.85□□□□□ -1.95
LPCAT2-208ENST00000566915 KRTAP10-3P60369 221 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 ZNF575Q86XF7 245 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 RANBP2P49792 3224 aaKnown RBP2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 PRUNE2Q8WUY3 3088 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 KRTAP10-11P60412 298 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 C9orf129Q5T035 196 aaKnown RBP2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 C9orf163Q8N9P6 203 aa2.84□□□□□ -1.95
LPCAT2-208ENST00000566915 TRANK1O15050 2925 aa2.84□□□□□ -1.96
LPCAT2-208ENST00000566915 ZNF861PO60384 105 aa2.84□□□□□ -1.96
LPCAT2-208ENST00000566915 SPACA4Q8TDM5 124 aa2.84□□□□□ -1.96
LPCAT2-208ENST00000566915 MIR22HGQ0VDD5 57 aa2.83□□□□□ -1.96
LPCAT2-208ENST00000566915 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
LPCAT2-208ENST00000566915 NBPF19A0A087WUL8 3843 aa2.83□□□□□ -1.96
LPCAT2-208ENST00000566915 A0A1W2PNM2 257 aa2.83□□□□□ -1.96
LPCAT2-208ENST00000566915 MUC3AQ02505 3323 aa2.82□□□□□ -1.96
LPCAT2-208ENST00000566915 JMJD1CQ15652 2540 aa2.82□□□□□ -1.96
LPCAT2-208ENST00000566915 FAM104AQ969W3 186 aa2.82□□□□□ -1.96
LPCAT2-208ENST00000566915 MTORP42345 2549 aa2.81□□□□□ -1.96
LPCAT2-208ENST00000566915 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
LPCAT2-208ENST00000566915 PLA2G1BP04054 148 aaKnown RBP2.81□□□□□ -1.96
LPCAT2-208ENST00000566915 IGLV7-46A0A075B6I9 117 aa2.81□□□□□ -1.96
LPCAT2-208ENST00000566915 CASC10Q5T4H9 136 aa2.8□□□□□ -1.96
LPCAT2-208ENST00000566915 LCE6AA0A183 80 aa2.8□□□□□ -1.96
LPCAT2-208ENST00000566915 Q96NJ1 140 aa2.8□□□□□ -1.96
LPCAT2-208ENST00000566915 Q75L30 129 aa2.8□□□□□ -1.96
LPCAT2-208ENST00000566915 CR1P17927 2039 aa2.8□□□□□ -1.96
LPCAT2-208ENST00000566915 SMG1Q96Q15 3661 aaKnown RBP2.79□□□□□ -1.96
LPCAT2-208ENST00000566915 SETD2Q9BYW2 2564 aaPredicted RBP2.79□□□□□ -1.96
LPCAT2-208ENST00000566915 CFAP54Q96N23 3096 aa2.79□□□□□ -1.96
LPCAT2-208ENST00000566915 CHTF8P0CG12 524 aa2.79□□□□□ -1.96
LPCAT2-208ENST00000566915 ASPMQ8IZT6 3477 aa2.79□□□□□ -1.96
LPCAT2-208ENST00000566915 WDR87Q6ZQQ6 2873 aa2.79□□□□□ -1.96
LPCAT2-208ENST00000566915 IGLV8-61A0A075B6I0 122 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 SPRR1AP35321 89 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 DSCR10P59022 87 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 IGLV7-43P04211 117 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 SPRR1BP22528 89 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 RELNP78509 3460 aa2.78□□□□□ -1.96
LPCAT2-208ENST00000566915 A0A087WTM6 91 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms