RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 CCL26Q9Y258 94 aa1.27□□□□□ -2.21
PALB2-204ENST00000566069 URB1O60287 2271 aaKnown RBP1.27□□□□□ -2.21
PALB2-204ENST00000566069 TECTAO75443 2155 aa1.27□□□□□ -2.21
PALB2-204ENST00000566069 ABCA1O95477 2261 aa1.26□□□□□ -2.21
PALB2-204ENST00000566069 POLR2KP53803 58 aaKnown RBP1.26□□□□□ -2.21
PALB2-204ENST00000566069 DEFB132Q7Z7B7 95 aa1.26□□□□□ -2.21
PALB2-204ENST00000566069 RPL39LQ96EH5 51 aaKnown RBP1.26□□□□□ -2.21
PALB2-204ENST00000566069 CCL19Q99731 98 aa1.26□□□□□ -2.21
PALB2-204ENST00000566069 PRO3102Q9H379 93 aa1.26□□□□□ -2.21
PALB2-204ENST00000566069 CRIPTQ9P021 101 aa1.26□□□□□ -2.21
PALB2-204ENST00000566069 PSORS1C2Q9UIG4 136 aa1.26□□□□□ -2.21
PALB2-204ENST00000566069 RTTNQ86VV8 2226 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 DEFB131BA0A096LNP1 70 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 MRPL33O75394 65 aaKnown RBP1.25□□□□□ -2.21
PALB2-204ENST00000566069 DEFB103AP81534 67 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 TPRXLQ17RH7 258 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 LINC00575Q6W349 94 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 Q8IZM0 81 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 KNTC1P50748 2209 aa1.25□□□□□ -2.21
PALB2-204ENST00000566069 ALMS1Q8TCU4 4167 aa1.24□□□□□ -2.21
PALB2-204ENST00000566069 H3BRN7 92 aa1.24□□□□□ -2.21
PALB2-204ENST00000566069 SPACA4Q8TDM5 124 aa1.24□□□□□ -2.21
PALB2-204ENST00000566069 AHCTF1Q8WYP5 2266 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 ZFHX2Q9C0A1 2572 aaPredicted RBP1.23□□□□□ -2.21
PALB2-204ENST00000566069 SPTY2D1-AS1A0A0U1RR47 76 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 PRCDQ00LT1 54 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 Q6ZRX8 168 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 DEFB104AQ8WTQ1 72 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 PDE4DIPQ5VU43 2346 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 BPTFQ12830 3046 aa1.23□□□□□ -2.21
PALB2-204ENST00000566069 ASCC3Q8N3C0 2202 aaKnown RBP1.23□□□□□ -2.21
PALB2-204ENST00000566069 ASXL3Q9C0F0 2248 aa1.22□□□□□ -2.21
PALB2-204ENST00000566069 C10orf55Q5SWW7 151 aa1.22□□□□□ -2.21
PALB2-204ENST00000566069 PLAC4Q8WY50 150 aa1.22□□□□□ -2.21
PALB2-204ENST00000566069 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 COL6A6A6NMZ7 2263 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 A0A096LNT2 108 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 G3V318 75 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 ANGP03950 147 aaKnown RBP1.21□□□□□ -2.22
PALB2-204ENST00000566069 COX6A2Q02221 97 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 WFDC10BQ8IUB3 73 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 WFDC13Q8IUB5 93 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 FN1P02751 2386 aaKnown RBP1.21□□□□□ -2.22
PALB2-204ENST00000566069 PTPRQQ9UMZ3 2332 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 SSC5DA1L4H1 1573 aa1.21□□□□□ -2.22
PALB2-204ENST00000566069 COL4A5P29400 1685 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 I3L2K1 104 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 K7EQZ3 153 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 LY6G6CO95867 125 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 MINOS1Q5TGZ0 78 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 COL4A2P08572 1712 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 BRWD1Q9NSI6 2320 aa1.2□□□□□ -2.22
PALB2-204ENST00000566069 ANKRD17O75179 2603 aaKnown RBP1.19□□□□□ -2.22
PALB2-204ENST00000566069 GVQW2A0A096LPI5 108 aaPredicted RBP1.19□□□□□ -2.22
PALB2-204ENST00000566069 DEFB108AA8MXU0 73 aa1.19□□□□□ -2.22
PALB2-204ENST00000566069 INE1O15225 51 aa1.19□□□□□ -2.22
PALB2-204ENST00000566069 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.19□□□□□ -2.22
PALB2-204ENST00000566069 TP53AIP1Q9HCN2 124 aa1.19□□□□□ -2.22
PALB2-204ENST00000566069 DOPEY2Q9Y3R5 2298 aa1.19□□□□□ -2.22
PALB2-204ENST00000566069 M0QY20 66 aa1.18□□□□□ -2.22
PALB2-204ENST00000566069 RPL39P5Q59GN2 51 aa1.18□□□□□ -2.22
PALB2-204ENST00000566069 TOMM7Q9P0U1 55 aa1.18□□□□□ -2.22
PALB2-204ENST00000566069 C6orf48Q9UBA6 75 aa1.18□□□□□ -2.22
PALB2-204ENST00000566069 TNRC6CQ9HCJ0 1690 aaKnown RBP1.18□□□□□ -2.22
PALB2-204ENST00000566069 KNL1Q8NG31 2342 aa1.17□□□□□ -2.22
PALB2-204ENST00000566069 STATHP02808 62 aa1.17□□□□□ -2.22
PALB2-204ENST00000566069 KAAG1Q9UBP8 84 aa1.17□□□□□ -2.22
PALB2-204ENST00000566069 A8MTW9 85 aa1.16□□□□□ -2.22
PALB2-204ENST00000566069 LYNX1G3V0Z9 82 aa1.16□□□□□ -2.22
PALB2-204ENST00000566069 WT1-ASQ06250 92 aa1.16□□□□□ -2.22
PALB2-204ENST00000566069 TMEM167AQ8TBQ9 72 aa1.16□□□□□ -2.22
PALB2-204ENST00000566069 CNOT1A5YKK6 2376 aaKnown RBP1.15□□□□□ -2.22
PALB2-204ENST00000566069 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.15□□□□□ -2.231e-9■■■■■ 37.6
PALB2-204ENST00000566069 IGLV5-48A0A075B6I7 105 aa1.15□□□□□ -2.23
PALB2-204ENST00000566069 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
PALB2-204ENST00000566069 MRPL34Q9BQ48 92 aaKnown RBP1.15□□□□□ -2.23
PALB2-204ENST00000566069 CNTRLQ7Z7A1 2325 aa1.15□□□□□ -2.23
PALB2-204ENST00000566069 USF3Q68DE3 2245 aa1.15□□□□□ -2.23
PALB2-204ENST00000566069 CACNA1EQ15878 2313 aa1.14□□□□□ -2.23
PALB2-204ENST00000566069 Q6ZRN7 208 aaPredicted RBP1.14□□□□□ -2.23
PALB2-204ENST00000566069 Q6ZSA8 131 aa1.14□□□□□ -2.23
PALB2-204ENST00000566069 UBE2DNLQ8IWF7 75 aa1.14□□□□□ -2.23
PALB2-204ENST00000566069 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
PALB2-204ENST00000566069 FLG2Q5D862 2391 aaPredicted RBP1.14□□□□□ -2.23
PALB2-204ENST00000566069 H0YAA0 97 aa1.13□□□□□ -2.23
PALB2-204ENST00000566069 K7EIM0 57 aa1.13□□□□□ -2.23
PALB2-204ENST00000566069 LELP1Q5T871 98 aa1.13□□□□□ -2.23
PALB2-204ENST00000566069 DEFB130BP0DP73 79 aa1.12□□□□□ -2.23
PALB2-204ENST00000566069 DEFB130AP0DP74 79 aa1.12□□□□□ -2.23
PALB2-204ENST00000566069 H1FX-AS1Q4G0G2 97 aa1.12□□□□□ -2.23
PALB2-204ENST00000566069 C10orf99Q6UWK7 81 aa1.12□□□□□ -2.23
PALB2-204ENST00000566069 USMG5Q96IX5 58 aa1.12□□□□□ -2.23
PALB2-204ENST00000566069 PLCE1Q9P212 2302 aa1.12□□□□□ -2.23
PALB2-204ENST00000566069 KMT2BQ9UMN6 2715 aaPredicted RBP1.12□□□□□ -2.23
PALB2-204ENST00000566069 APELAP0DMC3 54 aa1.11□□□□□ -2.23
PALB2-204ENST00000566069 WNK2Q9Y3S1 2297 aa1.11□□□□□ -2.23
PALB2-204ENST00000566069 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms