RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	LY6G6E	A0A0G2JKS1	128 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	DSCR9	P59020	149 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	ODF3L2	Q3SX64	289 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	C11orf71	Q6IPW1	123 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	LINC00612	Q8N6U2	182 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	C9orf163	Q8N9P6	203 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970		U3KQA8	63 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	CRYBG3	Q68DQ2	2970 aa		4.18	□□□□□ -1.74
PTPN9-204	ENST00000564970	TRGV4	A0A0C4DH28	118 aa		4.17	□□□□□ -1.74
PTPN9-204	ENST00000564970	FSHB	P01225	129 aa		4.17	□□□□□ -1.74
PTPN9-204	ENST00000564970	IGLV1-51	P01701	117 aa		4.17	□□□□□ -1.74
PTPN9-204	ENST00000564970	KRTAP4-2	Q9BYR5	136 aa		4.17	□□□□□ -1.74
PTPN9-204	ENST00000564970	ZNF702P	Q9H963	129 aa		4.17	□□□□□ -1.74
PTPN9-204	ENST00000564970	SPTBN1	Q01082	2364 aa	Known RBP	4.17	□□□□□ -1.74
PTPN9-204	ENST00000564970		A0A0A0MQY5	61 aa		4.16	□□□□□ -1.74
PTPN9-204	ENST00000564970	SPAG11A	Q6PDA7	123 aa		4.16	□□□□□ -1.74
PTPN9-204	ENST00000564970	LINC00476	Q8WZB0	136 aa		4.16	□□□□□ -1.74
PTPN9-204	ENST00000564970	SPRR4	Q96PI1	79 aa		4.16	□□□□□ -1.74
PTPN9-204	ENST00000564970	FAM215A	Q9Y5M1	114 aa		4.16	□□□□□ -1.74
PTPN9-204	ENST00000564970	FN1	P02751	2386 aa	Known RBP	4.16	□□□□□ -1.74
PTPN9-204	ENST00000564970	CSMD2	Q7Z408	3487 aa		4.15	□□□□□ -1.74
PTPN9-204	ENST00000564970	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN9-204	ENST00000564970		A0A1B0GUV1	79 aa		4.15	□□□□□ -1.75
PTPN9-204	ENST00000564970	DNAJC13	O75165	2243 aa		4.15	□□□□□ -1.75
PTPN9-204	ENST00000564970	APC	P25054	2843 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	SDK1	Q7Z5N4	2213 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	DEFB131B	A0A096LNP1	70 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	SPINK13	Q1W4C9	94 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	DEFB112	Q30KQ8	113 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970		Q8N9L7	120 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970		Q8NBF4	154 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	KRTAP4-9	Q9BYQ8	210 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	STAB1	Q9NY15	2570 aa		4.14	□□□□□ -1.75
PTPN9-204	ENST00000564970	ICE1	Q9Y2F5	2266 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	IGKV2D-24	A0A075B6R9	120 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970		A0A0J9YWU9	116 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	LINC00959	A0A1B0GUT2	108 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	INS	P01308	110 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	SPATA8	Q6RVD6	105 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	C5orf56	Q8N8D9	126 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	ST20-AS1	Q8NBB2	130 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	TP53AIP1	Q9HCN2	124 aa		4.13	□□□□□ -1.75
PTPN9-204	ENST00000564970	PROK1	P58294	105 aa		4.12	□□□□□ -1.75
PTPN9-204	ENST00000564970		Q6ZSN1	163 aa		4.12	□□□□□ -1.75
PTPN9-204	ENST00000564970	PRAC1	Q96KF2	57 aa		4.12	□□□□□ -1.75
PTPN9-204	ENST00000564970	MAP6D1	Q9H9H5	199 aa		4.12	□□□□□ -1.75
PTPN9-204	ENST00000564970	WNK2	Q9Y3S1	2297 aa		4.12	□□□□□ -1.75
PTPN9-204	ENST00000564970		A0A1W2PNM2	257 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	GYPE	P15421	78 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	DSCR10	P59022	87 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	ROMO1	P60602	79 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	PRR4	Q16378	134 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	KRTAP5-3	Q6L8H2	238 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	LINC00528	Q8N1L1	170 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	DHRS4-AS1	Q9P1J3	65 aa		4.11	□□□□□ -1.75
PTPN9-204	ENST00000564970	SPINK7	P58062	85 aa		4.1	□□□□□ -1.75
PTPN9-204	ENST00000564970	C1orf134	Q5TEV5	83 aa		4.1	□□□□□ -1.75
PTPN9-204	ENST00000564970	KLK12	Q9UKR0	248 aa		4.1	□□□□□ -1.75
PTPN9-204	ENST00000564970	KNL1	Q8NG31	2342 aa		4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970	PATE3	B3GLJ2	98 aa		4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970		G3V318	75 aa		4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970	MSMB	P08118	114 aa		4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970	PRB3	Q04118	309 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970	ATP1A1-AS1	Q5TC04	95 aa		4.09	□□□□□ -1.75
PTPN9-204	ENST00000564970	PKD1L1	Q8TDX9	2849 aa		4.08	□□□□□ -1.76
PTPN9-204	ENST00000564970	UQCR11	O14957	56 aa		4.08	□□□□□ -1.76
PTPN9-204	ENST00000564970	DEFB1	P60022	68 aa		4.08	□□□□□ -1.76
PTPN9-204	ENST00000564970	JMJD1C	Q15652	2540 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	ABCA4	P78363	2273 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970		A0A087WSZ3	146 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970		K7EQZ3	153 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	IGKV3-20	P01619	116 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	IGLV1-40	P01703	118 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	KRTAP19-1	Q8IUB9	90 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	DEFB119	Q8N690	84 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	KRTAP9-8	Q9BYQ0	159 aa		4.07	□□□□□ -1.76
PTPN9-204	ENST00000564970	MED13L	Q71F56	2210 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	COL6A5	A8TX70	2615 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	RPL37AP8	A6NKH3	93 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	CMC4	P56277	68 aa	Predicted RBP	4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	TNP2	Q05952	138 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	C1orf137	Q5JT78	98 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	REG3G	Q6UW15	175 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	C19orf73	Q9NVV2	129 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	NBAS	A2RRP1	2371 aa		4.06	□□□□□ -1.76
PTPN9-204	ENST00000564970	NOTCH1	P46531	2555 aa		4.05	□□□□□ -1.76
PTPN9-204	ENST00000564970	IGLV5-37	A0A075B6J1	123 aa		4.05	□□□□□ -1.76
PTPN9-204	ENST00000564970		B4DSR2	109 aa		4.05	□□□□□ -1.76
PTPN9-204	ENST00000564970	CSAG1	Q6PB30	78 aa		4.05	□□□□□ -1.76
PTPN9-204	ENST00000564970	NBEAL2	Q6ZNJ1	2754 aa		4.05	□□□□□ -1.76
PTPN9-204	ENST00000564970	TACC2	O95359	2948 aa		4.04	□□□□□ -1.76
PTPN9-204	ENST00000564970	IGKV3-7	A0A075B6H7	116 aa		4.04	□□□□□ -1.76
PTPN9-204	ENST00000564970	TRGV1	A0A0A0MS02	117 aa		4.04	□□□□□ -1.76
PTPN9-204	ENST00000564970		A8MWP4	228 aa		4.03	□□□□□ -1.76
PTPN9-204	ENST00000564970	C16orf74	Q96GX8	76 aa		4.03	□□□□□ -1.76
PTPN9-204	ENST00000564970	FLNA	P21333	2647 aa	Known RBP	4.03	□□□□□ -1.76
PTPN9-204	ENST00000564970	CCDC168	Q8NDH2	2452 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms