RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 CFC1P0CG37 223 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 SERTAD4-AS1Q5TG53 156 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 MRPL55Q7Z7F7 128 aaKnown RBP4.71□□□□□ -1.66
GINS3-205ENST00000564814 TMEM126AQ9H061 195 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 FAM30AQ9NZY2 134 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
GINS3-205ENST00000564814 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
GINS3-205ENST00000564814 LINC00337Q8N6G1 96 aa4.7□□□□□ -1.66
GINS3-205ENST00000564814 NKAPP1Q8N9T2 125 aa4.7□□□□□ -1.66
GINS3-205ENST00000564814 VPS25Q9BRG1 176 aa4.7□□□□□ -1.66
GINS3-205ENST00000564814 KCNQ1DNQ9H478 68 aa4.7□□□□□ -1.66
GINS3-205ENST00000564814 IGLV1-50A0A075B6I6 118 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 TRBV20-1A0A075B6N2 111 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 FAM168BA1KXE4 195 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 FAM229AH3BQW9 127 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 M0QXV9 152 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 SPRR1AP35321 89 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 SCXQ7RTU7 201 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 CIRBP-AS1Q8TBR5 109 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 PRO1854Q9UHT4 67 aa4.69□□□□□ -1.66
GINS3-205ENST00000564814 PRYO14603 147 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 TSPAN13O95857 204 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 SCGB1C2P0DMR2 95 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 FUSP35637 526 aaKnown RBP eCLIP4.68□□□□□ -1.66
GINS3-205ENST00000564814 PSMB2P49721 201 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 XGP55808 180 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 NPC2P61916 151 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 Q1RN00 199 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
GINS3-205ENST00000564814 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
GINS3-205ENST00000564814 KRTAP4-16G5E9R7 235 aaPredicted RBP4.67□□□□□ -1.66
GINS3-205ENST00000564814 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
GINS3-205ENST00000564814 FAM19A5Q7Z5A7 132 aaPredicted RBP4.67□□□□□ -1.66
GINS3-205ENST00000564814 LINC00167Q96N53 147 aa4.67□□□□□ -1.66
GINS3-205ENST00000564814 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
GINS3-205ENST00000564814 TRBV10-3A0A0K0K1G6 114 aa4.66□□□□□ -1.66
GINS3-205ENST00000564814 H0Y9J4 135 aa4.66□□□□□ -1.66
GINS3-205ENST00000564814 H3BMG7 143 aa4.66□□□□□ -1.66
GINS3-205ENST00000564814 NCR3O14931 201 aa4.66□□□□□ -1.66
GINS3-205ENST00000564814 PRR3P79522 188 aaKnown RBP4.66□□□□□ -1.66
GINS3-205ENST00000564814 COX6CP09669 75 aa4.65□□□□□ -1.67
GINS3-205ENST00000564814 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.67
GINS3-205ENST00000564814 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.67
GINS3-205ENST00000564814 TRAV23DV6A0A075B6W5 121 aa4.64□□□□□ -1.67
GINS3-205ENST00000564814 H7C2G1 150 aa4.64□□□□□ -1.67
GINS3-205ENST00000564814 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
GINS3-205ENST00000564814 RPL13AP40429 203 aaKnown RBP4.64□□□□□ -1.67
GINS3-205ENST00000564814 ATXN8Q156A1 80 aa4.64□□□□□ -1.67
GINS3-205ENST00000564814 PHF5AQ7RTV0 110 aaKnown RBP4.64□□□□□ -1.67
GINS3-205ENST00000564814 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
GINS3-205ENST00000564814 A0A1B0GX51 115 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 ELOF1P60002 83 aaKnown RBP4.63□□□□□ -1.67
GINS3-205ENST00000564814 REG3GQ6UW15 175 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 KRTAP13-1Q8IUC0 172 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 KRTAP11-1Q8IUC1 163 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 Q8N1X5 172 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 DIRC1Q969H9 104 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 DPH3Q96FX2 82 aa4.63□□□□□ -1.67
GINS3-205ENST00000564814 H0YGX0 51 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 BCE1O60756 84 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 INAFM2P0DMQ5 153 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 UBE2BP63146 152 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 ETDBQ3ZM63 59 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 Q6ZRX8 168 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 OR13C6PQ8NH95 151 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
GINS3-205ENST00000564814 RPL37AP8A6NKH3 93 aa4.61□□□□□ -1.67
GINS3-205ENST00000564814 TCL1BO95988 128 aa4.61□□□□□ -1.67
GINS3-205ENST00000564814 PCP4P48539 62 aa4.61□□□□□ -1.67
GINS3-205ENST00000564814 C6orf99Q4VX62 202 aa4.61□□□□□ -1.67
GINS3-205ENST00000564814 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
GINS3-205ENST00000564814 B5MCH6 92 aa4.6□□□□□ -1.67
GINS3-205ENST00000564814 C9JAW5 83 aa4.6□□□□□ -1.67
GINS3-205ENST00000564814 TRIAP1O43715 76 aa4.6□□□□□ -1.67
GINS3-205ENST00000564814 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
GINS3-205ENST00000564814 PPDPFLQ8WWR9 84 aa4.6□□□□□ -1.67
GINS3-205ENST00000564814 MUC2Q02817 5179 aa4.6□□□□□ -1.67
GINS3-205ENST00000564814 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
GINS3-205ENST00000564814 RNF213Q63HN8 5207 aa4.59□□□□□ -1.67
GINS3-205ENST00000564814 SLC25A20O43772 301 aa4.59□□□□□ -1.67
GINS3-205ENST00000564814 TEN1Q86WV5 123 aa4.59□□□□□ -1.67
GINS3-205ENST00000564814 MTURNQ8N3F0 131 aa4.59□□□□□ -1.67
GINS3-205ENST00000564814 DHRS4-AS1Q9P1J3 65 aa4.59□□□□□ -1.67
GINS3-205ENST00000564814 ETDCA0A1B0GVM5 59 aa4.58□□□□□ -1.68
GINS3-205ENST00000564814 ZNF861PO60384 105 aa4.58□□□□□ -1.68
GINS3-205ENST00000564814 IGLV7-43P04211 117 aa4.58□□□□□ -1.68
GINS3-205ENST00000564814 COX7BP24311 80 aa4.58□□□□□ -1.68
GINS3-205ENST00000564814 LINC00575Q6W349 94 aa4.58□□□□□ -1.68
GINS3-205ENST00000564814 FAT1Q14517 4588 aa4.58□□□□□ -1.68
GINS3-205ENST00000564814 H3BT86 120 aa4.57□□□□□ -1.68
GINS3-205ENST00000564814 LST1O00453 97 aa4.57□□□□□ -1.68
GINS3-205ENST00000564814 TRACP01848 142 aa4.57□□□□□ -1.68
GINS3-205ENST00000564814 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
GINS3-205ENST00000564814 SIGMAR1Q99720 223 aa4.57□□□□□ -1.68
GINS3-205ENST00000564814 Q9BRP9 147 aa4.57□□□□□ -1.68
GINS3-205ENST00000564814 H3BQ85 93 aa4.56□□□□□ -1.68
GINS3-205ENST00000564814 PLA2G1BP04054 148 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms