RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 URB1O60287 2271 aaKnown RBP0.16□□□□□ -2.38
CHD9-211ENST00000564600 NF1P21359 2839 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 MYO7BQ6PIF6 2116 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 NBEAQ8NFP9 2946 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 USH2AO75445 5202 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 F8P00451 2351 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 TROQ12816 1431 aaPredicted RBP0.16□□□□□ -2.38
CHD9-211ENST00000564600 BTAF1O14981 1849 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 GOLGA4Q13439 2230 aaKnown RBP0.16□□□□□ -2.38
CHD9-211ENST00000564600 TRAV21A0A0B4J279 112 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 IFI6P09912 130 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 CLTCQ00610 1675 aaKnown RBP0.16□□□□□ -2.38
CHD9-211ENST00000564600 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 PAPPAQ13219 1627 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 C2CD3Q4AC94 2353 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 NKTRP30414 1462 aaKnown RBP0.16□□□□□ -2.38
CHD9-211ENST00000564600 CCDC18Q5T9S5 1454 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 LRBAP50851 2863 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 SPHKAPQ2M3C7 1700 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 HTTP42858 3142 aa0.16□□□□□ -2.38
CHD9-211ENST00000564600 PEG3Q9GZU2 1588 aa0.15□□□□□ -2.38
CHD9-211ENST00000564600 PTPRZ1P23471 2315 aaPredicted RBP0.15□□□□□ -2.38
CHD9-211ENST00000564600 AKAP6Q13023 2319 aa0.15□□□□□ -2.38
CHD9-211ENST00000564600 CSPG4Q6UVK1 2322 aa0.15□□□□□ -2.38
CHD9-211ENST00000564600 TET3O43151 1660 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 CUL7Q14999 1698 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 AHCTF1Q8WYP5 2266 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 CEP350Q5VT06 3117 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 RGPD8O14715 1765 aaPredicted RBP0.15□□□□□ -2.39
CHD9-211ENST00000564600 COL14A1Q05707 1796 aaKnown RBP0.15□□□□□ -2.39
CHD9-211ENST00000564600 RGPD5Q99666 1765 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 CHD9Q3L8U1 2897 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 URB2Q14146 1524 aaKnown RBP0.15□□□□□ -2.39
CHD9-211ENST00000564600 C9orf92A6NGG3 77 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 PDCD5O14737 125 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 LINC00158P58513 81 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 BVES-AS1Q5T3Y7 98 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 CRYBG3Q68DQ2 2970 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 WFDC13Q8IUB5 93 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 C20orf78Q9BR46 151 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 TIMM8BQ9Y5J9 83 aaPredicted RBP0.15□□□□□ -2.39
CHD9-211ENST00000564600 IGF2RP11717 2491 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 BOD1L1Q8NFC6 3051 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 TOP2BQ02880 1626 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 DCHS2Q6V1P9 2916 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 XRN1Q8IZH2 1706 aaKnown RBP0.15□□□□□ -2.39
CHD9-211ENST00000564600 ABCC10Q5T3U5 1492 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 PKDREJQ9NTG1 2253 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 DOPEY2Q9Y3R5 2298 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 MYH4Q9Y623 1939 aa0.15□□□□□ -2.39
CHD9-211ENST00000564600 PPRC1Q5VV67 1664 aaKnown RBP0.14□□□□□ -2.39
CHD9-211ENST00000564600 ANKARQ7Z5J8 1434 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 REV3LO60673 3130 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 KNL1Q8NG31 2342 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 ABCC3O15438 1527 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 KIAA0556O60303 1618 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 CHD1O14646 1710 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 KNDC1Q76NI1 1749 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 SUPT6HQ7KZ85 1726 aaKnown RBP0.14□□□□□ -2.39
CHD9-211ENST00000564600 ABCA3Q99758 1704 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 H3BUA1 57 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 H3BVH4 76 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 KLK9Q2XQG4 91 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 GNG13Q9P2W3 67 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 CELSR1Q9NYQ6 3014 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 LOC400499M0QZD8 3231 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
CHD9-211ENST00000564600 SAMD9Q5K651 1589 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 ROBO1Q9Y6N7 1651 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 DNAH12Q6ZR08 3092 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 TACC2O95359 2948 aa0.14□□□□□ -2.39
CHD9-211ENST00000564600 FRYLO94915 3013 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 FRYQ5TBA9 3013 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 ABCC1P33527 1531 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 TULP4Q9NRJ4 1543 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 MARF1Q9Y4F3 1742 aaKnown RBP0.13□□□□□ -2.39
CHD9-211ENST00000564600 CHD7Q9P2D1 2997 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 TSC2P49815 1807 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 ATMQ13315 3056 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 C5orf42Q9H799 3197 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 DEFB131BA0A096LNP1 70 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 H3BUT2 72 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 K7EMI3 77 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 NDUFA4O00483 81 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 ATXN8Q156A1 80 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 DEFB121Q5J5C9 76 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 NCBP2-AS2Q69YL0 99 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 C18orf32Q8TCD1 76 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 S100ZQ8WXG8 99 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 SMCO4Q9NRQ5 59 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 CCDC88BA6NC98 1476 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 ATP7BP35670 1465 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 TRIOO75962 3097 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 EP400Q96L91 3159 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 LAMA2P24043 3122 aaKnown RBP0.13□□□□□ -2.39
CHD9-211ENST00000564600 MGAQ8IWI9 3026 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 DMXL2Q8TDJ6 3036 aa0.13□□□□□ -2.39
CHD9-211ENST00000564600 CELSR2Q9HCU4 2923 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms