RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 SOSTDC1Q6X4U4 206 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 LINC00336Q6ZUF6 198 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 Q75L30 129 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 C9orf163Q8N9P6 203 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
SMG1-209ENST00000563836 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
SMG1-209ENST00000563836 A0A1W2PPM0 123 aa5.28□□□□□ -1.56
SMG1-209ENST00000563836 RTL8CO15255 209 aa5.28□□□□□ -1.56
SMG1-209ENST00000563836 WFDC2Q14508 124 aa5.28□□□□□ -1.56
SMG1-209ENST00000563836 VPS25Q9BRG1 176 aa5.28□□□□□ -1.56
SMG1-209ENST00000563836 H0YGX0 51 aa5.27□□□□□ -1.57
SMG1-209ENST00000563836 SLC25A20O43772 301 aa5.27□□□□□ -1.57
SMG1-209ENST00000563836 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
SMG1-209ENST00000563836 ATXN8Q156A1 80 aa5.27□□□□□ -1.57
SMG1-209ENST00000563836 SPCS1Q9Y6A9 102 aa5.27□□□□□ -1.57
SMG1-209ENST00000563836 DNAL4O96015 105 aa5.26□□□□□ -1.57
SMG1-209ENST00000563836 LINC01620Q4KN68 170 aa5.26□□□□□ -1.57
SMG1-209ENST00000563836 FAM19A5Q7Z5A7 132 aaPredicted RBP5.26□□□□□ -1.57
SMG1-209ENST00000563836 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
SMG1-209ENST00000563836 K7ERU9 68 aa5.25□□□□□ -1.57
SMG1-209ENST00000563836 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
SMG1-209ENST00000563836 UBE2BP63146 152 aa5.25□□□□□ -1.57
SMG1-209ENST00000563836 C9orf129Q5T035 196 aaKnown RBP5.25□□□□□ -1.57
SMG1-209ENST00000563836 LINC00337Q8N6G1 96 aa5.25□□□□□ -1.57
SMG1-209ENST00000563836 DIRC1Q969H9 104 aa5.25□□□□□ -1.57
SMG1-209ENST00000563836 NAA38Q9BRA0 125 aaKnown RBP5.25□□□□□ -1.57
SMG1-209ENST00000563836 IGKV2-28A0A075B6P5 120 aa5.24□□□□□ -1.57
SMG1-209ENST00000563836 A0A096LNI7 61 aa5.24□□□□□ -1.57
SMG1-209ENST00000563836 IGKV2D-28P01615 120 aa5.24□□□□□ -1.57
SMG1-209ENST00000563836 LINC01547P58512 204 aaPredicted RBP5.24□□□□□ -1.57
SMG1-209ENST00000563836 MRPL55Q7Z7F7 128 aaKnown RBP5.24□□□□□ -1.57
SMG1-209ENST00000563836 TGP01266 2768 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 TENM2Q9NT68 2774 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 DYNC2H1Q8NCM8 4307 aaKnown RBP5.23□□□□□ -1.57
SMG1-209ENST00000563836 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 TRBV10-3A0A0K0K1G6 114 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 K7EP34 96 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
SMG1-209ENST00000563836 SMIM11BQ8TCY0 68 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 C22orf24Q9Y442 160 aa5.23□□□□□ -1.57
SMG1-209ENST00000563836 DNAH7Q8WXX0 4024 aa5.22□□□□□ -1.57
SMG1-209ENST00000563836 ETDCA0A1B0GVM5 59 aa5.22□□□□□ -1.57
SMG1-209ENST00000563836 IGLV6-57P01721 117 aa5.22□□□□□ -1.57
SMG1-209ENST00000563836 SDIM1Q6ZPB5 146 aa5.22□□□□□ -1.57
SMG1-209ENST00000563836 A0A1B0GX51 115 aa5.21□□□□□ -1.58
SMG1-209ENST00000563836 H3BQ85 93 aa5.21□□□□□ -1.58
SMG1-209ENST00000563836 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
SMG1-209ENST00000563836 COX7BP24311 80 aa5.21□□□□□ -1.58
SMG1-209ENST00000563836 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
SMG1-209ENST00000563836 C6orf99Q4VX62 202 aa5.21□□□□□ -1.58
SMG1-209ENST00000563836 C7orf33Q8WU49 177 aa5.21□□□□□ -1.58
SMG1-209ENST00000563836 TRBV7-6A0A0J9YX20 115 aa5.2□□□□□ -1.58
SMG1-209ENST00000563836 LINC00167Q96N53 147 aa5.2□□□□□ -1.58
SMG1-209ENST00000563836 FAM168BA1KXE4 195 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 RPL37AP8A6NKH3 93 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 F8W1H4 67 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 PLECQ15149 4684 aaKnown RBP5.19□□□□□ -1.58
SMG1-209ENST00000563836 REG3GQ6UW15 175 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 SPACA4Q8TDM5 124 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 KCNQ1DNQ9H478 68 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 STARD9Q9P2P6 4700 aa5.19□□□□□ -1.58
SMG1-209ENST00000563836 IGLV1-50A0A075B6I6 118 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 hADV29S1A0JD25 119 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 H3BMG7 143 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 LST1O00453 97 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 TCL1BO95988 128 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 TRACP01848 142 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 INAFM2P0DMQ5 153 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 GAGE2AQ6NT46 116 aa5.18□□□□□ -1.58
SMG1-209ENST00000563836 C9JAW5 83 aa5.17□□□□□ -1.58
SMG1-209ENST00000563836 OCIAD2Q56VL3 154 aa5.17□□□□□ -1.58
SMG1-209ENST00000563836 CLEC2BQ92478 149 aa5.17□□□□□ -1.58
SMG1-209ENST00000563836 ORMDL1Q9P0S3 153 aa5.17□□□□□ -1.58
SMG1-209ENST00000563836 DHRS4-AS1Q9P1J3 65 aa5.17□□□□□ -1.58
SMG1-209ENST00000563836 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
SMG1-209ENST00000563836 UBE2AP49459 152 aa5.16□□□□□ -1.58
SMG1-209ENST00000563836 ELOF1P60002 83 aaKnown RBP5.16□□□□□ -1.58
SMG1-209ENST00000563836 PHF5AQ7RTV0 110 aaKnown RBP5.16□□□□□ -1.58
SMG1-209ENST00000563836 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
SMG1-209ENST00000563836 Q8NDZ9 215 aa5.16□□□□□ -1.58
SMG1-209ENST00000563836 LYSTQ99698 3801 aa5.15□□□□□ -1.58
SMG1-209ENST00000563836 H3BT86 120 aa5.15□□□□□ -1.59
SMG1-209ENST00000563836 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
SMG1-209ENST00000563836 J3QR89 54 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 TMEM256-PLSCR3K7ERE1 68 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.14□□□□□ -1.59
SMG1-209ENST00000563836 LINC00575Q6W349 94 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 SMIM20Q8N5G0 67 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 SIGMAR1Q99720 223 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
SMG1-209ENST00000563836 BAALC-AS2P0C853 105 aa5.13□□□□□ -1.59
SMG1-209ENST00000563836 FUSP35637 526 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMG1-209ENST00000563836 Q6ZRX8 168 aa5.13□□□□□ -1.59
SMG1-209ENST00000563836 ANKRD29Q8N6D5 301 aa5.13□□□□□ -1.59
SMG1-209ENST00000563836 VPS13DQ5THJ4 4388 aa5.12□□□□□ -1.59
SMG1-209ENST00000563836 BCE1O60756 84 aa5.12□□□□□ -1.59
SMG1-209ENST00000563836 SPRR1AP35321 89 aa5.11□□□□□ -1.59
SMG1-209ENST00000563836 C1orf137Q5JT78 98 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms