RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 LTAP01374 205 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 APOC3P02656 99 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 IFITM1P13164 125 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 SERF2P84101 59 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 SLC25A34Q6PIV7 304 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
TCF4-220ENST00000563824 IGHV1-24A0A0C4DH33 117 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 TAX1BP3O14907 124 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 FABP2P12104 132 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 UBE2G1P62253 170 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 ASB16-AS1Q495Z4 193 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 MRPL54Q6P161 138 aaKnown RBP3.17□□□□□ -1.9
TCF4-220ENST00000563824 LCA10Q71F78 164 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 SMCO4Q9NRQ5 59 aa3.17□□□□□ -1.9
TCF4-220ENST00000563824 TRAV13-1A0A0B4J241 112 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 CTXND1A0A1B0GTU2 59 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 COLCA2A8K830 154 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 ZNF727A8MUV8 499 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 C9JQL5 133 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 H3BMG7 143 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 M0QY20 66 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 BPY2O14599 106 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 ZNF73O43830 326 aaPredicted RBP3.16□□□□□ -1.9
TCF4-220ENST00000563824 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
TCF4-220ENST00000563824 SPANXN1Q5VSR9 72 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 KCNRGQ8N5I3 272 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 AQP10Q96PS8 301 aa3.16□□□□□ -1.9
TCF4-220ENST00000563824 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
TCF4-220ENST00000563824 SSPOA2VEC9 5147 aa3.15□□□□□ -1.9
TCF4-220ENST00000563824 GVQW2A0A096LPI5 108 aaPredicted RBP3.15□□□□□ -1.91
TCF4-220ENST00000563824 IGKV3OR2-268A0A0C4DH90 116 aa3.15□□□□□ -1.91
TCF4-220ENST00000563824 RPL7L1Q6DKI1 246 aaKnown RBP3.15□□□□□ -1.91
TCF4-220ENST00000563824 LINC00526Q96FQ7 95 aa3.15□□□□□ -1.91
TCF4-220ENST00000563824 MUC17Q685J3 4493 aa3.15□□□□□ -1.91
TCF4-220ENST00000563824 M0R378 163 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 MGPP08493 103 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 SRP19P09132 144 aaKnown RBP3.14□□□□□ -1.91
TCF4-220ENST00000563824 CXCL1P09341 107 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 C9orf153Q5TBE3 101 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 Q6ZUT4 128 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 ATOH7Q8N100 152 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 HIST3H2BBQ8N257 126 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 COPS9Q8WXC6 57 aa3.14□□□□□ -1.91
TCF4-220ENST00000563824 TRBV27A0A0K0K1C4 114 aa3.13□□□□□ -1.91
TCF4-220ENST00000563824 UQCRQO14949 82 aa3.13□□□□□ -1.91
TCF4-220ENST00000563824 ALKAL2Q6UX46 152 aa3.13□□□□□ -1.91
TCF4-220ENST00000563824 BAGE2Q86Y30 109 aa3.13□□□□□ -1.91
TCF4-220ENST00000563824 SEC11CQ9BY50 192 aa3.13□□□□□ -1.91
TCF4-220ENST00000563824 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 TMEM256-PLSCR3K7ERE1 68 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BOP23527 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BBP33778 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BDP58876 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BCP62807 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HBBP68871 147 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST2H2BEQ16778 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.12□□□□□ -1.91
TCF4-220ENST00000563824 C10orf91Q5T1B1 145 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 PHF5AQ7RTV0 110 aaKnown RBP3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BHQ93079 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 RAB37Q96AX2 223 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BNQ99877 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BMQ99879 126 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 C8orf17Q9NRJ1 99 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 TP73-AS1Q9UF72 201 aa3.12□□□□□ -1.91
TCF4-220ENST00000563824 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
TCF4-220ENST00000563824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.11□□□□□ -1.91
TCF4-220ENST00000563824 IGKV2-29A2NJV5 120 aaPredicted RBP3.11□□□□□ -1.91
TCF4-220ENST00000563824 XCL1P47992 114 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 UBE2BP63146 152 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 MT1HP80294 61 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 RNASE13Q5GAN3 156 aaKnown RBP3.11□□□□□ -1.91
TCF4-220ENST00000563824 LINC01545Q5VT33 79 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 FP248Q71RG6 208 aaPredicted RBP3.11□□□□□ -1.91
TCF4-220ENST00000563824 TEN1Q86WV5 123 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 CYTL1Q9NRR1 136 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 UQCR10Q9UDW1 63 aa3.11□□□□□ -1.91
TCF4-220ENST00000563824 FXYD6-FXYD2A0A087WZ82 144 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 LINC00959A0A1B0GUT2 108 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 C19orf71A6NCJ1 209 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 K7EP34 96 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 TRACP01848 142 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 CCL20P78556 96 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 C9orf116Q5BN46 136 aaPredicted RBP3.1□□□□□ -1.91
TCF4-220ENST00000563824 Q5W150 140 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
TCF4-220ENST00000563824 RPL39LQ96EH5 51 aaKnown RBP3.1□□□□□ -1.91
TCF4-220ENST00000563824 F2Z2F3 143 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 MT-ATP8P03928 68 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 TRGC1P0CF51 173 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 FABP4P15090 132 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
TCF4-220ENST00000563824 TRBV20-1A0A075B6N2 111 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms