RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 PRYO14603 147 aa5.9□□□□□ -1.46
CLK3-208ENST00000562626 ZNF861PO60384 105 aa5.9□□□□□ -1.46
CLK3-208ENST00000562626 DDTP30046 118 aa5.9□□□□□ -1.46
CLK3-208ENST00000562626 H0Y9J4 135 aa5.89□□□□□ -1.47
CLK3-208ENST00000562626 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
CLK3-208ENST00000562626 MT1HL1P0DM35 61 aa5.89□□□□□ -1.47
CLK3-208ENST00000562626 IFITM1P13164 125 aa5.89□□□□□ -1.47
CLK3-208ENST00000562626 SLC25A34Q6PIV7 304 aa5.89□□□□□ -1.47
CLK3-208ENST00000562626 FAM19A1Q7Z5A9 133 aa5.89□□□□□ -1.47
CLK3-208ENST00000562626 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
CLK3-208ENST00000562626 A4D1N5 150 aa5.88□□□□□ -1.47
CLK3-208ENST00000562626 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
CLK3-208ENST00000562626 Q6ZVH6 145 aa5.88□□□□□ -1.47
CLK3-208ENST00000562626 PPDPFQ9H3Y8 114 aa5.88□□□□□ -1.47
CLK3-208ENST00000562626 UBE2AP49459 152 aa5.87□□□□□ -1.47
CLK3-208ENST00000562626 S100A7L2Q5SY68 101 aa5.87□□□□□ -1.47
CLK3-208ENST00000562626 HIGD1BQ9P298 99 aa5.87□□□□□ -1.47
CLK3-208ENST00000562626 TRAV23DV6A0A075B6W5 121 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 B5MCH6 92 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 J3QL48 77 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 OR13C6PQ8NH95 151 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 DIRC1Q969H9 104 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 PRO1933Q9H354 126 aa5.86□□□□□ -1.47
CLK3-208ENST00000562626 ERC2-IT1O76042 136 aa5.85□□□□□ -1.47
CLK3-208ENST00000562626 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
CLK3-208ENST00000562626 SMCR5Q8TEV8 140 aa5.85□□□□□ -1.47
CLK3-208ENST00000562626 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
CLK3-208ENST00000562626 Q9BRP9 147 aa5.85□□□□□ -1.47
CLK3-208ENST00000562626 ANAPC11Q9NYG5 84 aa5.85□□□□□ -1.47
CLK3-208ENST00000562626 ZNF73O43830 326 aaPredicted RBP5.84□□□□□ -1.47
CLK3-208ENST00000562626 OXTP01178 125 aa5.84□□□□□ -1.47
CLK3-208ENST00000562626 HIGD2AQ9BW72 106 aa5.84□□□□□ -1.47
CLK3-208ENST00000562626 A0A1B0GV90 55 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 ETDCA0A1B0GVM5 59 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 A6NDN8 102 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 FXYD2P54710 66 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 Q6ZRX8 168 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
CLK3-208ENST00000562626 A0A087X002 238 aa5.82□□□□□ -1.48
CLK3-208ENST00000562626 M0R143 59 aa5.82□□□□□ -1.48
CLK3-208ENST00000562626 C6orf99Q4VX62 202 aa5.82□□□□□ -1.48
CLK3-208ENST00000562626 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
CLK3-208ENST00000562626 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
CLK3-208ENST00000562626 CFC1P0CG37 223 aa5.81□□□□□ -1.48
CLK3-208ENST00000562626 CEND1Q8N111 149 aa5.81□□□□□ -1.48
CLK3-208ENST00000562626 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
CLK3-208ENST00000562626 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
CLK3-208ENST00000562626 RPL13AP40429 203 aaKnown RBP5.8□□□□□ -1.48
CLK3-208ENST00000562626 TAL2Q16559 108 aa5.8□□□□□ -1.48
CLK3-208ENST00000562626 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
CLK3-208ENST00000562626 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
CLK3-208ENST00000562626 TRAV13-2A0A0B4J235 113 aa5.79□□□□□ -1.48
CLK3-208ENST00000562626 ST20-AS1Q8NBB2 130 aa5.79□□□□□ -1.48
CLK3-208ENST00000562626 COX7BP24311 80 aa5.78□□□□□ -1.48
CLK3-208ENST00000562626 ELOF1P60002 83 aaKnown RBP5.78□□□□□ -1.48
CLK3-208ENST00000562626 HSD52Q0P140 79 aa5.78□□□□□ -1.48
CLK3-208ENST00000562626 H7C2G1 150 aa5.77□□□□□ -1.49
CLK3-208ENST00000562626 K7ERJ3 54 aa5.77□□□□□ -1.49
CLK3-208ENST00000562626 C3orf22Q8N5N4 141 aa5.77□□□□□ -1.49
CLK3-208ENST00000562626 A0A0B4J2C4 111 aa5.76□□□□□ -1.49
CLK3-208ENST00000562626 TRBV7-6A0A0J9YX20 115 aa5.75□□□□□ -1.49
CLK3-208ENST00000562626 GAGE2AQ6NT46 116 aa5.75□□□□□ -1.49
CLK3-208ENST00000562626 NHP2Q9NX24 153 aaKnown RBP5.75□□□□□ -1.49
CLK3-208ENST00000562626 A0A1B0GWB2 263 aa5.74□□□□□ -1.49
CLK3-208ENST00000562626 FAM229BQ4G0N7 80 aa5.74□□□□□ -1.49
CLK3-208ENST00000562626 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
CLK3-208ENST00000562626 COL5A1-AS1Q5SY13 56 aa5.74□□□□□ -1.49
CLK3-208ENST00000562626 BVES-AS1Q5T3Y7 98 aa5.74□□□□□ -1.49
CLK3-208ENST00000562626 RAB37Q96AX2 223 aa5.74□□□□□ -1.49
CLK3-208ENST00000562626 CRYGAP11844 174 aa5.73□□□□□ -1.49
CLK3-208ENST00000562626 PCP4P48539 62 aa5.73□□□□□ -1.49
CLK3-208ENST00000562626 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
CLK3-208ENST00000562626 HINT1P49773 126 aaPredicted RBP5.72□□□□□ -1.49
CLK3-208ENST00000562626 FAM218AQ96MZ4 157 aa5.72□□□□□ -1.49
CLK3-208ENST00000562626 DHRS4-AS1Q9P1J3 65 aa5.72□□□□□ -1.49
CLK3-208ENST00000562626 PRO1854Q9UHT4 67 aa5.72□□□□□ -1.49
CLK3-208ENST00000562626 TMEM238LA0A1B0GVL6 79 aa5.71□□□□□ -1.5
CLK3-208ENST00000562626 A6NJY4 79 aa5.71□□□□□ -1.5
CLK3-208ENST00000562626 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
CLK3-208ENST00000562626 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
CLK3-208ENST00000562626 SNHG12Q9BXW3 62 aa5.71□□□□□ -1.5
CLK3-208ENST00000562626 ZNF706Q9Y5V0 76 aaPredicted RBP5.71□□□□□ -1.5
CLK3-208ENST00000562626 TSPAN13O95857 204 aa5.7□□□□□ -1.5
CLK3-208ENST00000562626 SPRR1BP22528 89 aa5.7□□□□□ -1.5
CLK3-208ENST00000562626 TRIAP1O43715 76 aa5.69□□□□□ -1.5
CLK3-208ENST00000562626 Q1RN00 199 aa5.69□□□□□ -1.5
CLK3-208ENST00000562626 SMIM29Q86T20 159 aa5.69□□□□□ -1.5
CLK3-208ENST00000562626 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
CLK3-208ENST00000562626 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
CLK3-208ENST00000562626 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
CLK3-208ENST00000562626 IGLV5-48A0A075B6I7 105 aa5.68□□□□□ -1.5
CLK3-208ENST00000562626 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
CLK3-208ENST00000562626 MOBPQ13875 183 aa5.68□□□□□ -1.5
CLK3-208ENST00000562626 Q8N377 158 aa5.68□□□□□ -1.5
CLK3-208ENST00000562626 Q6ZQY7 126 aa5.67□□□□□ -1.5
CLK3-208ENST00000562626 CLEC2BQ92478 149 aa5.67□□□□□ -1.5
CLK3-208ENST00000562626 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
CLK3-208ENST00000562626 VAMP3Q15836 100 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms