RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.41□□□□□ -0.9
GTF3C1-203ENST00000562609 H3BQ85 93 aa9.41□□□□□ -0.9
GTF3C1-203ENST00000562609 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
GTF3C1-203ENST00000562609 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
GTF3C1-203ENST00000562609 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
GTF3C1-203ENST00000562609 COX7BP24311 80 aa9.4□□□□□ -0.91
GTF3C1-203ENST00000562609 IGLV6-57P01721 117 aa9.39□□□□□ -0.91
GTF3C1-203ENST00000562609 GYPEP15421 78 aa9.39□□□□□ -0.91
GTF3C1-203ENST00000562609 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
GTF3C1-203ENST00000562609 LINC00612Q8N6U2 182 aa9.38□□□□□ -0.91
GTF3C1-203ENST00000562609 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
GTF3C1-203ENST00000562609 A8MU10 97 aa9.37□□□□□ -0.91
GTF3C1-203ENST00000562609 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
GTF3C1-203ENST00000562609 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
GTF3C1-203ENST00000562609 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
GTF3C1-203ENST00000562609 DIRC1Q969H9 104 aa9.36□□□□□ -0.91
GTF3C1-203ENST00000562609 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
GTF3C1-203ENST00000562609 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
GTF3C1-203ENST00000562609 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
GTF3C1-203ENST00000562609 PRR4Q16378 134 aa9.35□□□□□ -0.91
GTF3C1-203ENST00000562609 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
GTF3C1-203ENST00000562609 A8MUN3 132 aa9.34□□□□□ -0.91
GTF3C1-203ENST00000562609 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
GTF3C1-203ENST00000562609 HTN3P15516 51 aa9.34□□□□□ -0.91
GTF3C1-203ENST00000562609 PRB2P02812 416 aaPredicted RBP9.33□□□□□ -0.92
GTF3C1-203ENST00000562609 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
GTF3C1-203ENST00000562609 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
GTF3C1-203ENST00000562609 A0A1B0GUV1 79 aa9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 APOC4P55056 127 aa9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 ZNF73O43830 326 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
GTF3C1-203ENST00000562609 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
GTF3C1-203ENST00000562609 LCE6AA0A183 80 aa9.29□□□□□ -0.92
GTF3C1-203ENST00000562609 PSCAO43653 123 aa9.29□□□□□ -0.92
GTF3C1-203ENST00000562609 Q8NAQ8 132 aa9.29□□□□□ -0.92
GTF3C1-203ENST00000562609 CYSRT1A8MQ03 144 aa9.28□□□□□ -0.92
GTF3C1-203ENST00000562609 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
GTF3C1-203ENST00000562609 KRTAP10-11P60412 298 aa9.28□□□□□ -0.92
GTF3C1-203ENST00000562609 ZCCHC13Q8WW36 166 aaKnown RBP9.28□□□□□ -0.92
GTF3C1-203ENST00000562609 XAGE1AQ9HD64 81 aa9.28□□□□□ -0.92
GTF3C1-203ENST00000562609 LYRM9A8MSI8 78 aa9.27□□□□□ -0.92
GTF3C1-203ENST00000562609 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.93
GTF3C1-203ENST00000562609 CMYA5Q8N3K9 4069 aa9.27□□□□□ -0.93
GTF3C1-203ENST00000562609 SPAG11BQ08648 103 aa9.27□□□□□ -0.93
GTF3C1-203ENST00000562609 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
GTF3C1-203ENST00000562609 UBE2BP63146 152 aa9.26□□□□□ -0.93
GTF3C1-203ENST00000562609 Q5VV11 94 aa9.26□□□□□ -0.93
GTF3C1-203ENST00000562609 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
GTF3C1-203ENST00000562609 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.24□□□□□ -0.93
GTF3C1-203ENST00000562609 REG3AQ06141 175 aa9.24□□□□□ -0.93
GTF3C1-203ENST00000562609 CYP4F30PQ9H0H9 118 aa9.24□□□□□ -0.93
GTF3C1-203ENST00000562609 LINC00588Q9Y4M8 146 aa9.24□□□□□ -0.93
GTF3C1-203ENST00000562609 MGAM2Q2M2H8 2515 aa9.24□□□□□ -0.93
GTF3C1-203ENST00000562609 SPART-AS1P0CW21 52 aa9.23□□□□□ -0.93
GTF3C1-203ENST00000562609 A0A0J9YWU9 116 aa9.23□□□□□ -0.93
GTF3C1-203ENST00000562609 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
GTF3C1-203ENST00000562609 SPTSSBQ8NFR3 76 aa9.23□□□□□ -0.93
GTF3C1-203ENST00000562609 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
GTF3C1-203ENST00000562609 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
GTF3C1-203ENST00000562609 C16orf90A8MZG2 172 aa9.21□□□□□ -0.94
GTF3C1-203ENST00000562609 UBE2AP49459 152 aa9.2□□□□□ -0.94
GTF3C1-203ENST00000562609 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
GTF3C1-203ENST00000562609 DEFB105AQ8NG35 78 aa9.19□□□□□ -0.94
GTF3C1-203ENST00000562609 M0R378 163 aa9.18□□□□□ -0.94
GTF3C1-203ENST00000562609 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
GTF3C1-203ENST00000562609 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
GTF3C1-203ENST00000562609 HCG22E2RYF7 251 aa9.15□□□□□ -0.94
GTF3C1-203ENST00000562609 PRR15LQ9BU68 103 aa9.15□□□□□ -0.94
GTF3C1-203ENST00000562609 K7EQZ3 153 aa9.14□□□□□ -0.95
GTF3C1-203ENST00000562609 NDUFB1O75438 58 aa9.14□□□□□ -0.95
GTF3C1-203ENST00000562609 VPREB1P12018 145 aa9.14□□□□□ -0.95
GTF3C1-203ENST00000562609 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
GTF3C1-203ENST00000562609 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
GTF3C1-203ENST00000562609 DSCR10P59022 87 aa9.13□□□□□ -0.95
GTF3C1-203ENST00000562609 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
GTF3C1-203ENST00000562609 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
GTF3C1-203ENST00000562609 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
GTF3C1-203ENST00000562609 LCA10Q71F78 164 aa9.12□□□□□ -0.95
GTF3C1-203ENST00000562609 Q8N377 158 aa9.12□□□□□ -0.95
GTF3C1-203ENST00000562609 IGLV5-48A0A075B6I7 105 aa9.11□□□□□ -0.95
GTF3C1-203ENST00000562609 EGFEM1PQ0D2K5 195 aa9.11□□□□□ -0.95
GTF3C1-203ENST00000562609 ATP11AUNQ6ZP68 121 aa9.11□□□□□ -0.95
GTF3C1-203ENST00000562609 LELP1Q5T871 98 aa9.11□□□□□ -0.95
GTF3C1-203ENST00000562609 NDUFS5O43920 106 aa9.1□□□□□ -0.95
GTF3C1-203ENST00000562609 WFDC10BQ8IUB3 73 aa9.1□□□□□ -0.95
GTF3C1-203ENST00000562609 A6NED7 52 aa9.09□□□□□ -0.96
GTF3C1-203ENST00000562609 LINC00208Q96KT6 92 aa9.09□□□□□ -0.96
GTF3C1-203ENST00000562609 DNAH3Q8TD57 4116 aa9.08□□□□□ -0.96
GTF3C1-203ENST00000562609 A6NN06 94 aa9.08□□□□□ -0.96
GTF3C1-203ENST00000562609 DEFB116Q30KQ4 102 aa9.07□□□□□ -0.96
GTF3C1-203ENST00000562609 MP68P56378 58 aa9.07□□□□□ -0.96
GTF3C1-203ENST00000562609 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
GTF3C1-203ENST00000562609 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
GTF3C1-203ENST00000562609 A0A1B0GW54 56 aa9.06□□□□□ -0.96
GTF3C1-203ENST00000562609 C11orf45Q8TAV5 145 aa9.06□□□□□ -0.96
GTF3C1-203ENST00000562609 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms