RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 GYPAP02724 150 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 AKAP12Q02952 1782 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 MAGI2Q86UL8 1455 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 QSER1Q2KHR3 1735 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 MYH4Q9Y623 1939 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 MYO3AQ8NEV4 1616 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 AKAP13Q12802 2813 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.31□□□□□ -2.46
CHD9-204ENST00000561869 VPS13DQ5THJ4 4388 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 HMGN2P05204 90 aaKnown RBP-0.31□□□□□ -2.46
CHD9-204ENST00000561869 SPRR2AP35326 72 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 DEFB135Q30KP9 77 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 KRTAP6-2Q3LI66 62 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 LELP1Q5T871 98 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 C9orf62Q8N4C0 152 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 C20orf78Q9BR46 151 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 PKD1L2Q7Z442 2459 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 KIF20BQ96Q89 1820 aa-0.31□□□□□ -2.46
CHD9-204ENST00000561869 CCNB3Q8WWL7 1395 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 COL14A1Q05707 1796 aaKnown RBP-0.32□□□□□ -2.46
CHD9-204ENST00000561869 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 PKD1L3Q7Z443 1732 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 ACACBO00763 2458 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 HERC2O95714 4834 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 ATP7BP35670 1465 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 MT4P47944 62 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 DEFB112Q30KQ8 113 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 NMSQ5H8A3 153 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 NF1P21359 2839 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 PTPN23Q9H3S7 1636 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 BCORQ6W2J9 1755 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
CHD9-204ENST00000561869 UBR1Q8IWV7 1749 aa-0.33□□□□□ -2.46
CHD9-204ENST00000561869 USP9YO00507 2555 aaPredicted RBP-0.33□□□□□ -2.46
CHD9-204ENST00000561869 COX7BP24311 80 aa-0.33□□□□□ -2.46
CHD9-204ENST00000561869 CDKN2A-AS1Q9UH64 79 aa-0.33□□□□□ -2.46
CHD9-204ENST00000561869 MUC17Q685J3 4493 aa-0.33□□□□□ -2.46
CHD9-204ENST00000561869 PRRC2CQ9Y520 2896 aaKnown RBP-0.33□□□□□ -2.46
CHD9-204ENST00000561869 NEXMIFQ5QGS0 1516 aa-0.33□□□□□ -2.46
CHD9-204ENST00000561869 PREX1Q8TCU6 1659 aa-0.33□□□□□ -2.46
CHD9-204ENST00000561869 USP9XQ93008 2570 aaPredicted RBP-0.34□□□□□ -2.46
CHD9-204ENST00000561869 MGAM2Q2M2H8 2515 aa-0.34□□□□□ -2.46
CHD9-204ENST00000561869 SMIM11AP58511 58 aa-0.34□□□□□ -2.46
CHD9-204ENST00000561869 PDE4DIPQ5VU43 2346 aa-0.34□□□□□ -2.46
CHD9-204ENST00000561869 COX6B2Q6YFQ2 88 aa-0.34□□□□□ -2.46
CHD9-204ENST00000561869 LYSTQ99698 3801 aa-0.34□□□□□ -2.46
CHD9-204ENST00000561869 NBPF19A0A087WUL8 3843 aa-0.34□□□□□ -2.46
CHD9-204ENST00000561869 DNAH3Q8TD57 4116 aa-0.35□□□□□ -2.46
CHD9-204ENST00000561869 TNRC18O15417 2968 aaPredicted RBP-0.35□□□□□ -2.47
CHD9-204ENST00000561869 RGPD1P0DJD0 1748 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 COL12A1Q99715 3063 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 A0A1B0GUT8 65 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 PEA15Q15121 130 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 PLGLAQ15195 96 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 HEPN1Q6WQI6 88 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 WFDC13Q8IUB5 93 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 LRRC7Q96NW7 1537 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 RGPD2P0DJD1 1756 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 MXRA5Q9NR99 2828 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
CHD9-204ENST00000561869 LRRC9Q6ZRR7 1453 aa-0.35□□□□□ -2.47
CHD9-204ENST00000561869 TTC37Q6PGP7 1564 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 MYO18BQ8IUG5 2567 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 EPG5Q9HCE0 2579 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 APOBP04114 4563 aaKnown RBP-0.36□□□□□ -2.47
CHD9-204ENST00000561869 AKAP9Q99996 3911 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 DNAH9Q9NYC9 4486 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 RGPD8O14715 1765 aaPredicted RBP-0.36□□□□□ -2.47
CHD9-204ENST00000561869 RGPD5Q99666 1765 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 ABCC3O15438 1527 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 SPRR2EP22531 72 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 PYY3Q5JQD4 70 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 UBR3Q6ZT12 1888 aa-0.36□□□□□ -2.47
CHD9-204ENST00000561869 HTTP42858 3142 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 SPG11Q96JI7 2443 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 ZZEF1O43149 2961 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 IQCF6A8MYZ5 107 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 PLIN4Q96Q06 1357 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.37□□□□□ -2.47
CHD9-204ENST00000561869 RGPD4Q7Z3J3 1758 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 PKHD1L1Q86WI1 4243 aa-0.37□□□□□ -2.47
CHD9-204ENST00000561869 ANK3Q12955 4377 aaKnown RBP-0.38□□□□□ -2.47
CHD9-204ENST00000561869 ANKRD11Q6UB99 2663 aaPredicted RBP-0.38□□□□□ -2.47
CHD9-204ENST00000561869 TMEM131LA2VDJ0 1609 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 USP32Q8NFA0 1604 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 DNAH2Q9P225 4427 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 MYMXA0A1B0GTQ4 84 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 V9GYS6 101 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 RGPD3A6NKT7 1758 aaPredicted RBP-0.38□□□□□ -2.47
CHD9-204ENST00000561869 SUPT6HQ7KZ85 1726 aaKnown RBP-0.38□□□□□ -2.47
CHD9-204ENST00000561869 TIAM2Q8IVF5 1701 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 BIRC6Q9NR09 4857 aa-0.38□□□□□ -2.47
CHD9-204ENST00000561869 DSPP15924 2871 aaKnown RBP-0.39□□□□□ -2.47
CHD9-204ENST00000561869 PVALEFA0A1B0GWK0 134 aa-0.39□□□□□ -2.47
CHD9-204ENST00000561869 K7EP34 96 aa-0.39□□□□□ -2.47
CHD9-204ENST00000561869 CYB5AP00167 134 aa-0.39□□□□□ -2.47
CHD9-204ENST00000561869 SNRPFP62306 86 aaKnown RBP-0.39□□□□□ -2.47
CHD9-204ENST00000561869 RPL38P63173 70 aaKnown RBP-0.39□□□□□ -2.47
CHD9-204ENST00000561869 GAFA1Q96PS6 74 aa-0.39□□□□□ -2.47
CHD9-204ENST00000561869 RABAC1Q9UI14 185 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms