RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 COL5A1-AS1Q5SY13 56 aa5.41□□□□□ -1.54
HERC1-210ENST00000560897 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
HERC1-210ENST00000560897 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
HERC1-210ENST00000560897 MYMXA0A1B0GTQ4 84 aa5.4□□□□□ -1.54
HERC1-210ENST00000560897 TMEM223A0PJW6 202 aa5.4□□□□□ -1.54
HERC1-210ENST00000560897 BCE1O60756 84 aa5.4□□□□□ -1.54
HERC1-210ENST00000560897 C6orf48Q9UBA6 75 aa5.4□□□□□ -1.54
HERC1-210ENST00000560897 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
HERC1-210ENST00000560897 LEPROTO15243 131 aa5.39□□□□□ -1.55
HERC1-210ENST00000560897 SPATA45Q537H7 98 aa5.39□□□□□ -1.55
HERC1-210ENST00000560897 MEIG1Q5JSS6 88 aa5.39□□□□□ -1.55
HERC1-210ENST00000560897 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
HERC1-210ENST00000560897 PAM16Q9Y3D7 125 aa5.39□□□□□ -1.55
HERC1-210ENST00000560897 TRBV30A0A0K0K1B3 111 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 J3QQQ9 107 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 NMUP48645 174 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 HERV-K104P63124 156 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 UBE2V1Q13404 147 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 ATOH7Q8N100 152 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 DAND5Q8N907 189 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
HERC1-210ENST00000560897 NDUFC2-KCTD14E9PQ53 114 aa5.37□□□□□ -1.55
HERC1-210ENST00000560897 UBE2AP49459 152 aa5.37□□□□□ -1.55
HERC1-210ENST00000560897 LINC00158P58513 81 aa5.37□□□□□ -1.55
HERC1-210ENST00000560897 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
HERC1-210ENST00000560897 GAGE2AQ6NT46 116 aa5.37□□□□□ -1.55
HERC1-210ENST00000560897 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
HERC1-210ENST00000560897 C22orf24Q9Y442 160 aa5.37□□□□□ -1.55
HERC1-210ENST00000560897 SSPOA2VEC9 5147 aa5.36□□□□□ -1.55
HERC1-210ENST00000560897 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
HERC1-210ENST00000560897 E9PLD3 99 aa5.36□□□□□ -1.55
HERC1-210ENST00000560897 PFN2P35080 140 aa5.36□□□□□ -1.55
HERC1-210ENST00000560897 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
HERC1-210ENST00000560897 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
HERC1-210ENST00000560897 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
HERC1-210ENST00000560897 ZNF815PA8K554 130 aa5.34□□□□□ -1.55
HERC1-210ENST00000560897 COX17Q14061 63 aa5.34□□□□□ -1.55
HERC1-210ENST00000560897 MRPL55Q7Z7F7 128 aaKnown RBP5.34□□□□□ -1.55
HERC1-210ENST00000560897 COX6B2Q6YFQ2 88 aa5.33□□□□□ -1.56
HERC1-210ENST00000560897 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
HERC1-210ENST00000560897 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
HERC1-210ENST00000560897 ERG28Q9UKR5 140 aa5.33□□□□□ -1.56
HERC1-210ENST00000560897 COPS9Q8WXC6 57 aa5.32□□□□□ -1.56
HERC1-210ENST00000560897 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
HERC1-210ENST00000560897 CBY1Q9Y3M2 126 aa5.32□□□□□ -1.56
HERC1-210ENST00000560897 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
HERC1-210ENST00000560897 SMIM13P0DJ93 91 aa5.31□□□□□ -1.56
HERC1-210ENST00000560897 USH2AO75445 5202 aa5.3□□□□□ -1.56
HERC1-210ENST00000560897 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
HERC1-210ENST00000560897 TMEM238C9JI98 176 aa5.3□□□□□ -1.56
HERC1-210ENST00000560897 RPL24P83731 157 aaKnown RBP5.3□□□□□ -1.56
HERC1-210ENST00000560897 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
HERC1-210ENST00000560897 C3orf22Q8N5N4 141 aa5.3□□□□□ -1.56
HERC1-210ENST00000560897 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
HERC1-210ENST00000560897 A0A0J9YXY3 114 aa5.29□□□□□ -1.56
HERC1-210ENST00000560897 COX8AP10176 69 aa5.29□□□□□ -1.56
HERC1-210ENST00000560897 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
HERC1-210ENST00000560897 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
HERC1-210ENST00000560897 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
HERC1-210ENST00000560897 TSPEAR-AS2P59090 65 aa5.28□□□□□ -1.56
HERC1-210ENST00000560897 PCP2Q8IVA1 136 aa5.28□□□□□ -1.56
HERC1-210ENST00000560897 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
HERC1-210ENST00000560897 BATFQ16520 125 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 BVES-AS1Q5T3Y7 98 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 Q6ZVH6 145 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 KRTAP13-1Q8IUC0 172 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 BOD1L2Q8IYS8 172 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 LINC00167Q96N53 147 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
HERC1-210ENST00000560897 TIMM17BO60830 172 aa5.26□□□□□ -1.57
HERC1-210ENST00000560897 SPINK1P00995 79 aa5.26□□□□□ -1.57
HERC1-210ENST00000560897 CFC1P0CG37 223 aa5.26□□□□□ -1.57
HERC1-210ENST00000560897 HINT1P49773 126 aaPredicted RBP5.26□□□□□ -1.57
HERC1-210ENST00000560897 NPC2P61916 151 aa5.26□□□□□ -1.57
HERC1-210ENST00000560897 HIST1H4GQ99525 98 aa5.26□□□□□ -1.57
HERC1-210ENST00000560897 TTTY13Q9BZ97 58 aa5.26□□□□□ -1.57
HERC1-210ENST00000560897 TAX1BP3O14907 124 aa5.25□□□□□ -1.57
HERC1-210ENST00000560897 IFITM1P13164 125 aa5.25□□□□□ -1.57
HERC1-210ENST00000560897 PRLHP81277 87 aa5.25□□□□□ -1.57
HERC1-210ENST00000560897 Q8NBF4 154 aa5.25□□□□□ -1.57
HERC1-210ENST00000560897 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
HERC1-210ENST00000560897 HSD52Q0P140 79 aa5.24□□□□□ -1.57
HERC1-210ENST00000560897 S100A7L2Q5SY68 101 aa5.24□□□□□ -1.57
HERC1-210ENST00000560897 C2orf91Q6ZV80 131 aa5.24□□□□□ -1.57
HERC1-210ENST00000560897 FAM19A1Q7Z5A9 133 aa5.24□□□□□ -1.57
HERC1-210ENST00000560897 HIGD1BQ9P298 99 aa5.24□□□□□ -1.57
HERC1-210ENST00000560897 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
HERC1-210ENST00000560897 A6NDN8 102 aa5.23□□□□□ -1.57
HERC1-210ENST00000560897 OR13C6PQ8NH95 151 aa5.23□□□□□ -1.57
HERC1-210ENST00000560897 LINC00308Q8TCZ7 52 aa5.23□□□□□ -1.57
HERC1-210ENST00000560897 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
HERC1-210ENST00000560897 M0R378 163 aa5.22□□□□□ -1.57
HERC1-210ENST00000560897 SEC61GP60059 68 aa5.22□□□□□ -1.57
HERC1-210ENST00000560897 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
HERC1-210ENST00000560897 MUSTN1Q8IVN3 82 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms