RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SCGB1C2P0DMR2 95 aa7.46□□□□□ -1.22
LDLR-212ENST00000560467 VPREB1P12018 145 aa7.46□□□□□ -1.22
LDLR-212ENST00000560467 PRR3P79522 188 aaKnown RBP7.46□□□□□ -1.22
LDLR-212ENST00000560467 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.22
LDLR-212ENST00000560467 C22orf24Q9Y442 160 aa7.46□□□□□ -1.22
LDLR-212ENST00000560467 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
LDLR-212ENST00000560467 MRPL55Q7Z7F7 128 aaKnown RBP7.45□□□□□ -1.22
LDLR-212ENST00000560467 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
LDLR-212ENST00000560467 IGKV2-28A0A075B6P5 120 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 M0QXV9 152 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 IGKV2D-28P01615 120 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 CHTF8P0CG12 524 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 UBE2BP63146 152 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 UBE2V1Q13404 147 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
LDLR-212ENST00000560467 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
LDLR-212ENST00000560467 GAGE10A6NGK3 116 aa7.43□□□□□ -1.22
LDLR-212ENST00000560467 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
LDLR-212ENST00000560467 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
LDLR-212ENST00000560467 RPL37AP61513 92 aaKnown RBP7.42□□□□□ -1.22
LDLR-212ENST00000560467 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
LDLR-212ENST00000560467 TRAV23DV6A0A075B6W5 121 aa7.41□□□□□ -1.22
LDLR-212ENST00000560467 A0A087WYN8 130 aa7.41□□□□□ -1.22
LDLR-212ENST00000560467 TRBV10-3A0A0K0K1G6 114 aa7.41□□□□□ -1.22
LDLR-212ENST00000560467 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
LDLR-212ENST00000560467 IGLV6-57P01721 117 aa7.41□□□□□ -1.22
LDLR-212ENST00000560467 FABP2P12104 132 aa7.41□□□□□ -1.22
LDLR-212ENST00000560467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
LDLR-212ENST00000560467 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
LDLR-212ENST00000560467 H0YGX0 51 aa7.4□□□□□ -1.22
LDLR-212ENST00000560467 H3BUT2 72 aa7.4□□□□□ -1.22
LDLR-212ENST00000560467 TSPAN13O95857 204 aa7.4□□□□□ -1.22
LDLR-212ENST00000560467 GTF2H5Q6ZYL4 71 aa7.4□□□□□ -1.22
LDLR-212ENST00000560467 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
LDLR-212ENST00000560467 PRYO14603 147 aa7.39□□□□□ -1.23
LDLR-212ENST00000560467 TAX1BP3O14907 124 aa7.39□□□□□ -1.23
LDLR-212ENST00000560467 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
LDLR-212ENST00000560467 RPL28P46779 137 aaKnown RBP7.39□□□□□ -1.23
LDLR-212ENST00000560467 SMIM11BQ8TCY0 68 aa7.39□□□□□ -1.23
LDLR-212ENST00000560467 DIRC1Q969H9 104 aa7.39□□□□□ -1.23
LDLR-212ENST00000560467 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
LDLR-212ENST00000560467 IGLV1-50A0A075B6I6 118 aa7.38□□□□□ -1.23
LDLR-212ENST00000560467 ETDCA0A1B0GVM5 59 aa7.38□□□□□ -1.23
LDLR-212ENST00000560467 SLC25A20O43772 301 aa7.38□□□□□ -1.23
LDLR-212ENST00000560467 ZNF73O43830 326 aaPredicted RBP7.38□□□□□ -1.23
LDLR-212ENST00000560467 Q8NDZ9 215 aa7.38□□□□□ -1.23
LDLR-212ENST00000560467 KCNQ1DNQ9H478 68 aa7.38□□□□□ -1.23
LDLR-212ENST00000560467 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
LDLR-212ENST00000560467 TRBV7-6A0A0J9YX20 115 aa7.37□□□□□ -1.23
LDLR-212ENST00000560467 LRP2P98164 4655 aa7.37□□□□□ -1.23
LDLR-212ENST00000560467 A0A1W2PPM0 123 aa7.36□□□□□ -1.23
LDLR-212ENST00000560467 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
LDLR-212ENST00000560467 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
LDLR-212ENST00000560467 PHF5AQ7RTV0 110 aaKnown RBP7.36□□□□□ -1.23
LDLR-212ENST00000560467 PANO1I0J062 215 aa7.35□□□□□ -1.23
LDLR-212ENST00000560467 TRIAP1O43715 76 aa7.35□□□□□ -1.23
LDLR-212ENST00000560467 COX7BP24311 80 aa7.35□□□□□ -1.23
LDLR-212ENST00000560467 NAA38Q9BRA0 125 aaKnown RBP7.35□□□□□ -1.23
LDLR-212ENST00000560467 GHRHP01286 108 aa7.34□□□□□ -1.23
LDLR-212ENST00000560467 DNAL4O96015 105 aa7.33□□□□□ -1.24
LDLR-212ENST00000560467 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
LDLR-212ENST00000560467 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
LDLR-212ENST00000560467 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
LDLR-212ENST00000560467 UBE2AP49459 152 aa7.32□□□□□ -1.24
LDLR-212ENST00000560467 DHRS4-AS1Q9P1J3 65 aa7.32□□□□□ -1.24
LDLR-212ENST00000560467 TNXBP22105 4242 aa7.32□□□□□ -1.24
LDLR-212ENST00000560467 FAM19A1Q7Z5A9 133 aa7.31□□□□□ -1.24
LDLR-212ENST00000560467 A0A1B0GX51 115 aa7.3□□□□□ -1.24
LDLR-212ENST00000560467 BCE1O60756 84 aa7.3□□□□□ -1.24
LDLR-212ENST00000560467 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
LDLR-212ENST00000560467 hADV29S1A0JD25 119 aa7.29□□□□□ -1.24
LDLR-212ENST00000560467 K7EP34 96 aa7.29□□□□□ -1.24
LDLR-212ENST00000560467 K7ERU9 68 aa7.29□□□□□ -1.24
LDLR-212ENST00000560467 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
LDLR-212ENST00000560467 H3BQ85 93 aa7.28□□□□□ -1.24
LDLR-212ENST00000560467 SPRR1AP35321 89 aa7.28□□□□□ -1.24
LDLR-212ENST00000560467 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
LDLR-212ENST00000560467 Q6ZRX8 168 aa7.28□□□□□ -1.24
LDLR-212ENST00000560467 B5MCH6 92 aa7.27□□□□□ -1.25
LDLR-212ENST00000560467 H0Y9J4 135 aa7.27□□□□□ -1.25
LDLR-212ENST00000560467 TRACP01848 142 aa7.27□□□□□ -1.25
LDLR-212ENST00000560467 LINC00575Q6W349 94 aa7.27□□□□□ -1.25
LDLR-212ENST00000560467 CLEC2BQ92478 149 aa7.27□□□□□ -1.25
LDLR-212ENST00000560467 LST1O00453 97 aa7.26□□□□□ -1.25
LDLR-212ENST00000560467 TCL1BO95988 128 aa7.26□□□□□ -1.25
LDLR-212ENST00000560467 OCIAD2Q56VL3 154 aa7.26□□□□□ -1.25
LDLR-212ENST00000560467 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
LDLR-212ENST00000560467 H3BMG7 143 aa7.24□□□□□ -1.25
LDLR-212ENST00000560467 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
LDLR-212ENST00000560467 F8W1H4 67 aa7.23□□□□□ -1.25
LDLR-212ENST00000560467 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
LDLR-212ENST00000560467 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.23□□□□□ -1.25
LDLR-212ENST00000560467 ORMDL1Q9P0S3 153 aa7.23□□□□□ -1.25
LDLR-212ENST00000560467 C9JAW5 83 aa7.22□□□□□ -1.25
LDLR-212ENST00000560467 PRLHP81277 87 aa7.22□□□□□ -1.25
LDLR-212ENST00000560467 ZNF706Q9Y5V0 76 aaPredicted RBP7.22□□□□□ -1.25
LDLR-212ENST00000560467 J3QR89 54 aa7.21□□□□□ -1.26
LDLR-212ENST00000560467 TMEM256-PLSCR3K7ERE1 68 aa7.21□□□□□ -1.26
LDLR-212ENST00000560467 ZNF861PO60384 105 aa7.21□□□□□ -1.26
LDLR-212ENST00000560467 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms