RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 VAMP3Q15836 100 aa4.11□□□□□ -1.75
SPG11-221ENST00000560299 LINC00337Q8N6G1 96 aa4.11□□□□□ -1.75
SPG11-221ENST00000560299 H3BUT2 72 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 TAX1BP3O14907 124 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 SNCGO76070 127 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 SCGB1C2P0DMR2 95 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 LINC01620Q4KN68 170 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
SPG11-221ENST00000560299 MRPL55Q7Z7F7 128 aaKnown RBP4.1□□□□□ -1.75
SPG11-221ENST00000560299 SPACA4Q8TDM5 124 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 C22orf24Q9Y442 160 aa4.1□□□□□ -1.75
SPG11-221ENST00000560299 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
SPG11-221ENST00000560299 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 M0QXV9 152 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 TSPAN13O95857 204 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 IGLV6-57P01721 117 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 FABP2P12104 132 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 RPL28P46779 137 aaKnown RBP4.09□□□□□ -1.75
SPG11-221ENST00000560299 KRTAP10-2P60368 255 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 SERTAD4-AS1Q5TG53 156 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 KRTAP9-8Q9BYQ0 159 aa4.09□□□□□ -1.75
SPG11-221ENST00000560299 DNAH8Q96JB1 4490 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 TRBV20-1A0A075B6N2 111 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 TRAV23DV6A0A075B6W5 121 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 TRBV10-3A0A0K0K1G6 114 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 H0YGX0 51 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 CHTF8P0CG12 524 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 FUSP35637 526 aaKnown RBP eCLIP4.08□□□□□ -1.76
SPG11-221ENST00000560299 UBE2BP63146 152 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 Q8NDZ9 215 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 SMIM11BQ8TCY0 68 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 C7orf33Q8WU49 177 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
SPG11-221ENST00000560299 HSPG2P98160 4391 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 IGLV1-50A0A075B6I6 118 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 A0A087WYN8 130 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 A0A1W2PPM0 123 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 GAGE10A6NGK3 116 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 PRYO14603 147 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 Q6ZSA8 131 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 GTF2H5Q6ZYL4 71 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 DIRC1Q969H9 104 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 KCNQ1DNQ9H478 68 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 PLAC8Q9NZF1 115 aa4.07□□□□□ -1.76
SPG11-221ENST00000560299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.07□□□□□ -1.76
SPG11-221ENST00000560299 PCLOQ9Y6V0 5065 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 TRBV7-6A0A0J9YX20 115 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 RPL37AP8A6NKH3 93 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 TRIAP1O43715 76 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 SLC25A20O43772 301 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
SPG11-221ENST00000560299 C6orf99Q4VX62 202 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 NAA38Q9BRA0 125 aaKnown RBP4.06□□□□□ -1.76
SPG11-221ENST00000560299 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
SPG11-221ENST00000560299 ETDCA0A1B0GVM5 59 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 EPM2AB3EWF7 344 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 PANO1I0J062 215 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 GHRHP01286 108 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 KRTAP10-1P60331 282 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 ATXN8Q156A1 80 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 KRTAP7-1Q8IUC3 87 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 SPCS1Q9Y6A9 102 aa4.05□□□□□ -1.76
SPG11-221ENST00000560299 A0A1B0GX51 115 aa4.04□□□□□ -1.76
SPG11-221ENST00000560299 DNAL4O96015 105 aa4.04□□□□□ -1.76
SPG11-221ENST00000560299 COX7BP24311 80 aa4.04□□□□□ -1.76
SPG11-221ENST00000560299 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
SPG11-221ENST00000560299 A0A1B0GV90 55 aa4.03□□□□□ -1.76
SPG11-221ENST00000560299 INAFM2P0DMQ5 153 aa4.03□□□□□ -1.76
SPG11-221ENST00000560299 SPRR1AP35321 89 aa4.03□□□□□ -1.76
SPG11-221ENST00000560299 ELOF1P60002 83 aaKnown RBP4.03□□□□□ -1.76
SPG11-221ENST00000560299 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
SPG11-221ENST00000560299 FAM30AQ9NZY2 134 aa4.03□□□□□ -1.76
SPG11-221ENST00000560299 DHRS4-AS1Q9P1J3 65 aa4.03□□□□□ -1.76
SPG11-221ENST00000560299 FAT1Q14517 4588 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 hADV29S1A0JD25 119 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 H3BQ85 93 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 K7EP34 96 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 TCL1BO95988 128 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 TRACP01848 142 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 UBE2AP49459 152 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 LINC00575Q6W349 94 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 SCXQ7RTU7 201 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 FAM19A1Q7Z5A9 133 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 CLEC2BQ92478 149 aa4.02□□□□□ -1.77
SPG11-221ENST00000560299 H3BMG7 143 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 LST1O00453 97 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 BCE1O60756 84 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 UBE2V1Q13404 147 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 Q6ZRX8 168 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 Q8N1X5 172 aa4.01□□□□□ -1.77
SPG11-221ENST00000560299 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
SPG11-221ENST00000560299 SRRM2Q9UQ35 2752 aaKnown RBP4□□□□□ -1.77
SPG11-221ENST00000560299 B5MCH6 92 aa4□□□□□ -1.77
SPG11-221ENST00000560299 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
SPG11-221ENST00000560299 H0Y9J4 135 aa4□□□□□ -1.77
SPG11-221ENST00000560299 XGP55808 180 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms