RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 FXYD2P54710 66 aa9.05□□□□□ -0.96
SNRPA1-207ENST00000559309 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
SNRPA1-207ENST00000559309 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 IGLV7-43P04211 117 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 CFC1BP0CG36 223 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 CFC1P0CG37 223 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 FAT3Q8TDW7 4589 aa9.04□□□□□ -0.96
SNRPA1-207ENST00000559309 TRAV13-2A0A0B4J235 113 aa9.03□□□□□ -0.96
SNRPA1-207ENST00000559309 A0A0B4J2C4 111 aa9.03□□□□□ -0.96
SNRPA1-207ENST00000559309 H0Y9J4 135 aa9.03□□□□□ -0.96
SNRPA1-207ENST00000559309 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
SNRPA1-207ENST00000559309 TRAV23DV6A0A075B6W5 121 aa9.02□□□□□ -0.97
SNRPA1-207ENST00000559309 S100A7L2Q5SY68 101 aa9.02□□□□□ -0.97
SNRPA1-207ENST00000559309 ZNF861PO60384 105 aa9□□□□□ -0.97
SNRPA1-207ENST00000559309 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
SNRPA1-207ENST00000559309 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 A6NJY4 79 aa8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 B5MCH6 92 aa8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 ZNF73O43830 326 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 CTAG1AP78358 180 aa8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 BVES-AS1Q5T3Y7 98 aa8.99□□□□□ -0.97
SNRPA1-207ENST00000559309 TRBV7-6A0A0J9YX20 115 aa8.98□□□□□ -0.97
SNRPA1-207ENST00000559309 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
SNRPA1-207ENST00000559309 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
SNRPA1-207ENST00000559309 A6NDN8 102 aa8.97□□□□□ -0.97
SNRPA1-207ENST00000559309 SMIM11BQ8TCY0 68 aa8.97□□□□□ -0.97
SNRPA1-207ENST00000559309 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-207ENST00000559309 Q6ZRX8 168 aa8.96□□□□□ -0.98
SNRPA1-207ENST00000559309 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-207ENST00000559309 ELOF1P60002 83 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-207ENST00000559309 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
SNRPA1-207ENST00000559309 PRO1854Q9UHT4 67 aa8.95□□□□□ -0.98
SNRPA1-207ENST00000559309 PRLHP81277 87 aa8.94□□□□□ -0.98
SNRPA1-207ENST00000559309 C6orf99Q4VX62 202 aa8.94□□□□□ -0.98
SNRPA1-207ENST00000559309 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
SNRPA1-207ENST00000559309 DIRC1Q969H9 104 aa8.94□□□□□ -0.98
SNRPA1-207ENST00000559309 Q9BRP9 147 aa8.94□□□□□ -0.98
SNRPA1-207ENST00000559309 M0R143 59 aa8.93□□□□□ -0.98
SNRPA1-207ENST00000559309 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-207ENST00000559309 TNXBP22105 4242 aa8.92□□□□□ -0.98
SNRPA1-207ENST00000559309 ETDCA0A1B0GVM5 59 aa8.92□□□□□ -0.98
SNRPA1-207ENST00000559309 HINT1P49773 126 aaPredicted RBP8.92□□□□□ -0.98
SNRPA1-207ENST00000559309 RAB37Q96AX2 223 aa8.92□□□□□ -0.98
SNRPA1-207ENST00000559309 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
SNRPA1-207ENST00000559309 UBE2AP49459 152 aa8.91□□□□□ -0.98
SNRPA1-207ENST00000559309 K7ERJ3 54 aa8.9□□□□□ -0.98
SNRPA1-207ENST00000559309 COX7BP24311 80 aa8.89□□□□□ -0.99
SNRPA1-207ENST00000559309 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
SNRPA1-207ENST00000559309 TSPAN13O95857 204 aa8.87□□□□□ -0.99
SNRPA1-207ENST00000559309 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
SNRPA1-207ENST00000559309 DHRS4-AS1Q9P1J3 65 aa8.86□□□□□ -0.99
SNRPA1-207ENST00000559309 LINC00575Q6W349 94 aa8.85□□□□□ -0.99
SNRPA1-207ENST00000559309 HMCN2Q8NDA2 5059 aa8.84□□□□□ -0.99
SNRPA1-207ENST00000559309 TRIAP1O43715 76 aa8.84□□□□□ -0.99
SNRPA1-207ENST00000559309 SPRR4Q96PI1 79 aa8.84□□□□□ -0.99
SNRPA1-207ENST00000559309 H7C2G1 150 aa8.83□□□□□ -1
SNRPA1-207ENST00000559309 LINC00483Q53H64 154 aa8.83□□□□□ -1
SNRPA1-207ENST00000559309 LINC01600Q96MT4 127 aa8.83□□□□□ -1
SNRPA1-207ENST00000559309 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
SNRPA1-207ENST00000559309 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
SNRPA1-207ENST00000559309 H0YGX0 51 aa8.82□□□□□ -1
SNRPA1-207ENST00000559309 SPRR1BP22528 89 aa8.82□□□□□ -1
SNRPA1-207ENST00000559309 VAMP3Q15836 100 aa8.82□□□□□ -1
SNRPA1-207ENST00000559309 J3QL48 77 aa8.81□□□□□ -1
SNRPA1-207ENST00000559309 OXTP01178 125 aa8.81□□□□□ -1
SNRPA1-207ENST00000559309 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
SNRPA1-207ENST00000559309 FAM218AQ96MZ4 157 aa8.81□□□□□ -1
SNRPA1-207ENST00000559309 IGLV5-48A0A075B6I7 105 aa8.8□□□□□ -1
SNRPA1-207ENST00000559309 MT1HL1P0DM35 61 aa8.8□□□□□ -1
SNRPA1-207ENST00000559309 KRTAP10-8P60410 259 aa8.8□□□□□ -1
SNRPA1-207ENST00000559309 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
SNRPA1-207ENST00000559309 A0A1B0GX51 115 aa8.79□□□□□ -1
SNRPA1-207ENST00000559309 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
SNRPA1-207ENST00000559309 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
SNRPA1-207ENST00000559309 Q1RN00 199 aa8.78□□□□□ -1
SNRPA1-207ENST00000559309 A0A087X002 238 aa8.77□□□□□ -1.01
SNRPA1-207ENST00000559309 hADV29S1A0JD25 119 aa8.77□□□□□ -1.01
SNRPA1-207ENST00000559309 TAX1BP3O14907 124 aa8.77□□□□□ -1.01
SNRPA1-207ENST00000559309 BATFQ16520 125 aa8.76□□□□□ -1.01
SNRPA1-207ENST00000559309 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
SNRPA1-207ENST00000559309 UBR4Q5T4S7 5183 aa8.76□□□□□ -1.01
SNRPA1-207ENST00000559309 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
SNRPA1-207ENST00000559309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.74□□□□□ -1.01
SNRPA1-207ENST00000559309 PCP4L1A6NKN8 68 aa8.73□□□□□ -1.01
SNRPA1-207ENST00000559309 SLC25A20O43772 301 aa8.73□□□□□ -1.01
SNRPA1-207ENST00000559309 COX6CP09669 75 aa8.73□□□□□ -1.01
SNRPA1-207ENST00000559309 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
SNRPA1-207ENST00000559309 PRR26Q8N8Z3 221 aa8.73□□□□□ -1.01
SNRPA1-207ENST00000559309 CLEC2BQ92478 149 aa8.73□□□□□ -1.01
SNRPA1-207ENST00000559309 C9orf118A6NHY6 69 aa8.72□□□□□ -1.01
SNRPA1-207ENST00000559309 LST1O00453 97 aa8.72□□□□□ -1.01
SNRPA1-207ENST00000559309 PSMB2P49721 201 aa8.72□□□□□ -1.01
SNRPA1-207ENST00000559309 Q6ZQY7 126 aa8.72□□□□□ -1.01
SNRPA1-207ENST00000559309 Q8N377 158 aa8.72□□□□□ -1.01
SNRPA1-207ENST00000559309 TEX49A0A1B0GTD5 131 aa8.71□□□□□ -1.02
SNRPA1-207ENST00000559309 CRYGAP11844 174 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms