RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ZCCHC23Q6ZST2 131 aa3.13□□□□□ -1.91
CASC4-208ENST00000559151 MANBALQ9NQG1 85 aa3.13□□□□□ -1.91
CASC4-208ENST00000559151 RYR3Q15413 4870 aa3.13□□□□□ -1.91
CASC4-208ENST00000559151 CMYA5Q8N3K9 4069 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 A0A0G2JND7 137 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 CXorf51AA0A1B0GTR3 108 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 SNRNP200O75643 2136 aaKnown RBP3.12□□□□□ -1.91
CASC4-208ENST00000559151 ACYP1P07311 99 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 SMIM13P0DJ93 91 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 SMIM11AP58511 58 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 LYPD5Q6UWN5 251 aa3.12□□□□□ -1.91
CASC4-208ENST00000559151 ROS1P08922 2347 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 TRBV7-1A0A0A6YYK4 115 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 H7BZZ5 65 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 ERC2-IT1O76042 136 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 EFNA4P52798 201 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 FDCSPQ8NFU4 85 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 LINC01600Q96MT4 127 aa3.11□□□□□ -1.91
CASC4-208ENST00000559151 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
CASC4-208ENST00000559151 TMEM170BQ5T4T1 132 aa3.1□□□□□ -1.91
CASC4-208ENST00000559151 ZNF833PQ6ZTB9 187 aa3.1□□□□□ -1.91
CASC4-208ENST00000559151 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
CASC4-208ENST00000559151 VWFP04275 2813 aa3.1□□□□□ -1.91
CASC4-208ENST00000559151 ABCA1O95477 2261 aa3.09□□□□□ -1.91
CASC4-208ENST00000559151 WNK1Q9H4A3 2382 aa3.09□□□□□ -1.91
CASC4-208ENST00000559151 BCE1O60756 84 aa3.09□□□□□ -1.91
CASC4-208ENST00000559151 FLG2Q5D862 2391 aaPredicted RBP3.09□□□□□ -1.92
CASC4-208ENST00000559151 TRBV6-4A0A1B0GX49 114 aa3.08□□□□□ -1.92
CASC4-208ENST00000559151 TFF1P04155 84 aa3.08□□□□□ -1.92
CASC4-208ENST00000559151 KLKP1Q107X0 134 aa3.08□□□□□ -1.92
CASC4-208ENST00000559151 VMO1Q7Z5L0 202 aa3.08□□□□□ -1.92
CASC4-208ENST00000559151 Q8TAT8 98 aa3.08□□□□□ -1.92
CASC4-208ENST00000559151 PRO1854Q9UHT4 67 aa3.08□□□□□ -1.92
CASC4-208ENST00000559151 DNAL4O96015 105 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 UBE2D3P61077 147 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 UBE2D2P62837 147 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 ZNF56Q15929 161 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 FAM223AQ8IWN6 122 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 Q8N6K4 173 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 FAM167A-AS1Q96KT0 104 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 ORMDL1Q9P0S3 153 aa3.07□□□□□ -1.92
CASC4-208ENST00000559151 USF3Q68DE3 2245 aa3.05□□□□□ -1.92
CASC4-208ENST00000559151 TRAV22A0A0B4J277 110 aa3.05□□□□□ -1.92
CASC4-208ENST00000559151 EDDM3BP56851 147 aa3.05□□□□□ -1.92
CASC4-208ENST00000559151 DEFB106AQ8N104 65 aa3.05□□□□□ -1.92
CASC4-208ENST00000559151 TRBV7-3A0A075B6L6 115 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 TRAV12-3A0A0B4J271 114 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 TEX49A0A1B0GTD5 131 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 COX6CP09669 75 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 C10orf128Q5T292 105 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 SFTA2Q6UW10 78 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 ZNF818PQ6ZRF7 136 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 IFI27L1Q96BM0 104 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 COX14Q96I36 57 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 BPESC1Q9GZL8 116 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 DYNLRB1Q9NP97 96 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
CASC4-208ENST00000559151 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 TENM3Q9P273 2699 aa3.04□□□□□ -1.92
CASC4-208ENST00000559151 PLCE1Q9P212 2302 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 MED12Q93074 2177 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 TRAV23DV6A0A075B6W5 121 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 TMEM30CPA0ZSE6 113 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 Q5VV11 94 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 LIMD2Q9BT23 127 aa3.03□□□□□ -1.92
CASC4-208ENST00000559151 KIAA1549Q9HCM3 1950 aa3.02□□□□□ -1.93
CASC4-208ENST00000559151 TRBV25-1A0A075B6N4 114 aa3.02□□□□□ -1.93
CASC4-208ENST00000559151 TFF3Q07654 80 aa3.02□□□□□ -1.93
CASC4-208ENST00000559151 KRTAP26-1Q6PEX3 210 aa3.02□□□□□ -1.93
CASC4-208ENST00000559151 C6orf201Q7Z4U5 140 aa3.02□□□□□ -1.93
CASC4-208ENST00000559151 NDUFA11Q86Y39 141 aa3.02□□□□□ -1.93
CASC4-208ENST00000559151 COL7A1Q02388 2944 aa3.01□□□□□ -1.93
CASC4-208ENST00000559151 HMGN2P05204 90 aaKnown RBP3.01□□□□□ -1.93
CASC4-208ENST00000559151 COX8AP10176 69 aa3.01□□□□□ -1.93
CASC4-208ENST00000559151 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
CASC4-208ENST00000559151 TRBV10-1A0A0K0K1A3 114 aa3□□□□□ -1.93
CASC4-208ENST00000559151 IQCF6A8MYZ5 107 aa3□□□□□ -1.93
CASC4-208ENST00000559151 F8WEM9 126 aa3□□□□□ -1.93
CASC4-208ENST00000559151 UBE2D1P51668 147 aa3□□□□□ -1.93
CASC4-208ENST00000559151 DEFB121Q5J5C9 76 aa3□□□□□ -1.93
CASC4-208ENST00000559151 FREM3P0C091 2139 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 RYR1P21817 5038 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 CADP27708 2225 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 MYMXA0A1B0GTQ4 84 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 A0A1B0GWA3 101 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 FXYD1O00168 92 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 HILPDAQ9Y5L2 63 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
CASC4-208ENST00000559151 DNAH3Q8TD57 4116 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 HYDINQ4G0P3 5121 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 ZNF815PA8K554 130 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 TMEM14DPA8MWL7 114 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 C3orf79P0CE67 100 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 GCHFRP30047 84 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 SPINT3P49223 89 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 PSMG4Q5JS54 123 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 XAF1Q6GPH4 301 aa2.98□□□□□ -1.93
CASC4-208ENST00000559151 TMEM14CQ9P0S9 112 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms