RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 SERF1AO75920 110 aa5.95□□□□□ -1.46
SPG11-214ENST00000558989 CXCL5P42830 114 aa5.95□□□□□ -1.46
SPG11-214ENST00000558989 LAMTOR3Q9UHA4 124 aa5.95□□□□□ -1.46
SPG11-214ENST00000558989 NUPR1O60356 82 aa5.94□□□□□ -1.46
SPG11-214ENST00000558989 FABP4P15090 132 aa5.94□□□□□ -1.46
SPG11-214ENST00000558989 C9JAW5 83 aa5.93□□□□□ -1.46
SPG11-214ENST00000558989 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
SPG11-214ENST00000558989 C20orf202A1L168 122 aa5.92□□□□□ -1.46
SPG11-214ENST00000558989 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
SPG11-214ENST00000558989 LEPROTL1O95214 131 aa5.92□□□□□ -1.46
SPG11-214ENST00000558989 HERVK_113P61574 105 aa5.92□□□□□ -1.46
SPG11-214ENST00000558989 C22orf24Q9Y442 160 aa5.92□□□□□ -1.46
SPG11-214ENST00000558989 SPINK6Q6UWN8 80 aa5.91□□□□□ -1.46
SPG11-214ENST00000558989 PMCHL2Q9BQD1 86 aa5.91□□□□□ -1.46
SPG11-214ENST00000558989 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
SPG11-214ENST00000558989 TRAV12-1A0A0B4J245 112 aa5.9□□□□□ -1.47
SPG11-214ENST00000558989 IGLV7-43P04211 117 aa5.9□□□□□ -1.47
SPG11-214ENST00000558989 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
SPG11-214ENST00000558989 SCGB1C2P0DMR2 95 aa5.9□□□□□ -1.47
SPG11-214ENST00000558989 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
SPG11-214ENST00000558989 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BKO60814 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BJP06899 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BOP23527 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BBP33778 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BDP58876 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BCP62807 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST2H2BEQ16778 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BHQ93079 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BNQ99877 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 HIST1H2BMQ99879 126 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 LINC00158P58513 81 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 Q6Q795 121 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 LINC00167Q96N53 147 aa5.88□□□□□ -1.47
SPG11-214ENST00000558989 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
SPG11-214ENST00000558989 ADAMTSL4-AS1Q5T5F5 129 aa5.87□□□□□ -1.47
SPG11-214ENST00000558989 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
SPG11-214ENST00000558989 IGKV2-28A0A075B6P5 120 aa5.86□□□□□ -1.47
SPG11-214ENST00000558989 IGKV2D-28P01615 120 aa5.86□□□□□ -1.47
SPG11-214ENST00000558989 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
SPG11-214ENST00000558989 LINC01600Q96MT4 127 aa5.86□□□□□ -1.47
SPG11-214ENST00000558989 HRCT1Q6UXD1 115 aa5.85□□□□□ -1.47
SPG11-214ENST00000558989 TNXBP22105 4242 aa5.85□□□□□ -1.47
SPG11-214ENST00000558989 SMIM13P0DJ93 91 aa5.85□□□□□ -1.47
SPG11-214ENST00000558989 DIRC1Q969H9 104 aa5.85□□□□□ -1.47
SPG11-214ENST00000558989 IMUPQ9GZP8 106 aa5.85□□□□□ -1.47
SPG11-214ENST00000558989 TSPEAR-AS2P59090 65 aa5.84□□□□□ -1.47
SPG11-214ENST00000558989 Q8NDZ9 215 aa5.84□□□□□ -1.47
SPG11-214ENST00000558989 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 DPM2O94777 84 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 IGKCP01834 107 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 LINC00313P59037 77 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 NDUFA12Q9UI09 145 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 PLNP26678 52 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 COX17Q14061 63 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 DHRS4-AS1Q9P1J3 65 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 TP73-AS1Q9UF72 201 aa5.83□□□□□ -1.48
SPG11-214ENST00000558989 MIR7-3HGQ8N6C7 128 aa5.82□□□□□ -1.48
SPG11-214ENST00000558989 DAND5Q8N907 189 aa5.82□□□□□ -1.48
SPG11-214ENST00000558989 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
SPG11-214ENST00000558989 ZNF706Q9Y5V0 76 aaPredicted RBP5.82□□□□□ -1.48
SPG11-214ENST00000558989 MYMXA0A1B0GTQ4 84 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 M0R143 59 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 LST1O00453 97 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 LEPROTO15243 131 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 ZNF861PO60384 105 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 Q5XG85 94 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 SFTA2Q6UW10 78 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 J3QQQ9 107 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 NCR3O14931 201 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 BCE1O60756 84 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
SPG11-214ENST00000558989 UBE2AP49459 152 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 KRTAP10-8P60410 259 aa5.81□□□□□ -1.48
SPG11-214ENST00000558989 HMCN2Q8NDA2 5059 aa5.8□□□□□ -1.48
SPG11-214ENST00000558989 A8MUN3 132 aa5.8□□□□□ -1.48
SPG11-214ENST00000558989 SYS1-DBNDD2H3BUS1 97 aa5.8□□□□□ -1.48
SPG11-214ENST00000558989 NPC2P61916 151 aa5.8□□□□□ -1.48
SPG11-214ENST00000558989 CXCL6P80162 114 aa5.8□□□□□ -1.48
SPG11-214ENST00000558989 PRLHP81277 87 aa5.8□□□□□ -1.48
SPG11-214ENST00000558989 J3QR89 54 aa5.79□□□□□ -1.48
SPG11-214ENST00000558989 RPL28P46779 137 aaKnown RBP5.79□□□□□ -1.48
SPG11-214ENST00000558989 KRTDAPP60985 99 aa5.79□□□□□ -1.48
SPG11-214ENST00000558989 IGLV1-50A0A075B6I6 118 aa5.78□□□□□ -1.48
SPG11-214ENST00000558989 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
SPG11-214ENST00000558989 PRR15Q8IV56 129 aa5.78□□□□□ -1.48
SPG11-214ENST00000558989 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
SPG11-214ENST00000558989 LYRM7Q5U5X0 104 aa5.78□□□□□ -1.48
SPG11-214ENST00000558989 C3orf79P0CE67 100 aa5.77□□□□□ -1.49
SPG11-214ENST00000558989 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
SPG11-214ENST00000558989 HIST3H2BBQ8N257 126 aa5.76□□□□□ -1.49
SPG11-214ENST00000558989 Q8NBF4 154 aa5.76□□□□□ -1.49
SPG11-214ENST00000558989 M0R378 163 aa5.76□□□□□ -1.49
SPG11-214ENST00000558989 LINC01547P58512 204 aaPredicted RBP5.76□□□□□ -1.49
SPG11-214ENST00000558989 TTTY13Q9BZ97 58 aa5.76□□□□□ -1.49
SPG11-214ENST00000558989 S100A2P29034 98 aa5.75□□□□□ -1.49
SPG11-214ENST00000558989 LINC01545Q5VT33 79 aa5.75□□□□□ -1.49
SPG11-214ENST00000558989 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
SPG11-214ENST00000558989 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms