RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
CDC42BPB-203ENST00000558867 C6orf48Q9UBA6 75 aa9.95□□□□□ -0.82
CDC42BPB-203ENST00000558867 TRBV20-1A0A075B6N2 111 aa9.94□□□□□ -0.82
CDC42BPB-203ENST00000558867 A0A096LNI7 61 aa9.94□□□□□ -0.82
CDC42BPB-203ENST00000558867 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
CDC42BPB-203ENST00000558867 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
CDC42BPB-203ENST00000558867 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
CDC42BPB-203ENST00000558867 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPB-203ENST00000558867 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
CDC42BPB-203ENST00000558867 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
CDC42BPB-203ENST00000558867 TLX1NBP0CAT3 122 aa9.9□□□□□ -0.82
CDC42BPB-203ENST00000558867 Q1RN00 199 aa9.9□□□□□ -0.82
CDC42BPB-203ENST00000558867 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
CDC42BPB-203ENST00000558867 NDUFC2-KCTD14E9PQ53 114 aa9.89□□□□□ -0.83
CDC42BPB-203ENST00000558867 COX6CP09669 75 aa9.89□□□□□ -0.83
CDC42BPB-203ENST00000558867 LINC00337Q8N6G1 96 aa9.89□□□□□ -0.83
CDC42BPB-203ENST00000558867 TRIAP1O43715 76 aa9.88□□□□□ -0.83
CDC42BPB-203ENST00000558867 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
CDC42BPB-203ENST00000558867 PSMB2P49721 201 aa9.88□□□□□ -0.83
CDC42BPB-203ENST00000558867 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
CDC42BPB-203ENST00000558867 H7C2G1 150 aa9.86□□□□□ -0.83
CDC42BPB-203ENST00000558867 PSORS1C2Q9UIG4 136 aa9.86□□□□□ -0.83
CDC42BPB-203ENST00000558867 F8W1H4 67 aa9.85□□□□□ -0.83
CDC42BPB-203ENST00000558867 TCL1BO95988 128 aa9.85□□□□□ -0.83
CDC42BPB-203ENST00000558867 SCGB1C2P0DMR2 95 aa9.85□□□□□ -0.83
CDC42BPB-203ENST00000558867 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
CDC42BPB-203ENST00000558867 H3BMG7 143 aa9.83□□□□□ -0.84
CDC42BPB-203ENST00000558867 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
CDC42BPB-203ENST00000558867 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
CDC42BPB-203ENST00000558867 A0A0U1RQV1 116 aa9.82□□□□□ -0.84
CDC42BPB-203ENST00000558867 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
CDC42BPB-203ENST00000558867 PRO0461Q9UI25 63 aa9.82□□□□□ -0.84
CDC42BPB-203ENST00000558867 M0QXV9 152 aa9.81□□□□□ -0.84
CDC42BPB-203ENST00000558867 LST1O00453 97 aa9.81□□□□□ -0.84
CDC42BPB-203ENST00000558867 Q8NDZ9 215 aa9.81□□□□□ -0.84
CDC42BPB-203ENST00000558867 SMIM11BQ8TCY0 68 aa9.8□□□□□ -0.84
CDC42BPB-203ENST00000558867 H0YGX0 51 aa9.79□□□□□ -0.84
CDC42BPB-203ENST00000558867 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
CDC42BPB-203ENST00000558867 VPREB1P12018 145 aa9.79□□□□□ -0.84
CDC42BPB-203ENST00000558867 C1orf137Q5JT78 98 aa9.79□□□□□ -0.84
CDC42BPB-203ENST00000558867 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
CDC42BPB-203ENST00000558867 LPAP08519 4548 aa9.79□□□□□ -0.84
CDC42BPB-203ENST00000558867 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
CDC42BPB-203ENST00000558867 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
CDC42BPB-203ENST00000558867 CBY1Q9Y3M2 126 aa9.78□□□□□ -0.84
CDC42BPB-203ENST00000558867 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.85
CDC42BPB-203ENST00000558867 TRACP01848 142 aa9.76□□□□□ -0.85
CDC42BPB-203ENST00000558867 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
CDC42BPB-203ENST00000558867 M0R378 163 aa9.75□□□□□ -0.85
CDC42BPB-203ENST00000558867 NCR3O14931 201 aa9.75□□□□□ -0.85
CDC42BPB-203ENST00000558867 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
CDC42BPB-203ENST00000558867 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
CDC42BPB-203ENST00000558867 A0A1B0GX51 115 aa9.74□□□□□ -0.85
CDC42BPB-203ENST00000558867 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
CDC42BPB-203ENST00000558867 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
CDC42BPB-203ENST00000558867 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
CDC42BPB-203ENST00000558867 CLEC2BQ92478 149 aa9.74□□□□□ -0.85
CDC42BPB-203ENST00000558867 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
CDC42BPB-203ENST00000558867 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
CDC42BPB-203ENST00000558867 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPB-203ENST00000558867 H3BT86 120 aa9.72□□□□□ -0.85
CDC42BPB-203ENST00000558867 IGLV7-43P04211 117 aa9.72□□□□□ -0.85
CDC42BPB-203ENST00000558867 TRBV7-6A0A0J9YX20 115 aa9.71□□□□□ -0.86
CDC42BPB-203ENST00000558867 C9JAW5 83 aa9.71□□□□□ -0.86
CDC42BPB-203ENST00000558867 SLC25A20O43772 301 aa9.71□□□□□ -0.86
CDC42BPB-203ENST00000558867 PRR4Q16378 134 aa9.71□□□□□ -0.86
CDC42BPB-203ENST00000558867 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.86
CDC42BPB-203ENST00000558867 H0Y9J4 135 aa9.7□□□□□ -0.86
CDC42BPB-203ENST00000558867 MUC2Q02817 5179 aa9.69□□□□□ -0.86
CDC42BPB-203ENST00000558867 TRBV10-3A0A0K0K1G6 114 aa9.69□□□□□ -0.86
CDC42BPB-203ENST00000558867 ANKRD29Q8N6D5 301 aa9.69□□□□□ -0.86
CDC42BPB-203ENST00000558867 FAM218AQ96MZ4 157 aa9.69□□□□□ -0.86
CDC42BPB-203ENST00000558867 TRAV23DV6A0A075B6W5 121 aa9.68□□□□□ -0.86
CDC42BPB-203ENST00000558867 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
CDC42BPB-203ENST00000558867 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
CDC42BPB-203ENST00000558867 TEN1Q86WV5 123 aa9.67□□□□□ -0.86
CDC42BPB-203ENST00000558867 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
CDC42BPB-203ENST00000558867 MTURNQ8N3F0 131 aa9.66□□□□□ -0.86
CDC42BPB-203ENST00000558867 KRTAP9-2Q9BYQ4 174 aa9.66□□□□□ -0.86
CDC42BPB-203ENST00000558867 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
CDC42BPB-203ENST00000558867 ETDBQ3ZM63 59 aa9.65□□□□□ -0.86
CDC42BPB-203ENST00000558867 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.86
CDC42BPB-203ENST00000558867 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-203ENST00000558867 SNCGO76070 127 aa9.64□□□□□ -0.87
CDC42BPB-203ENST00000558867 K7ERU9 68 aa9.63□□□□□ -0.87
CDC42BPB-203ENST00000558867 DNAL4O96015 105 aa9.63□□□□□ -0.87
CDC42BPB-203ENST00000558867 LINC00575Q6W349 94 aa9.63□□□□□ -0.87
CDC42BPB-203ENST00000558867 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
CDC42BPB-203ENST00000558867 PRYO14603 147 aa9.62□□□□□ -0.87
CDC42BPB-203ENST00000558867 ELOF1P60002 83 aaKnown RBP9.62□□□□□ -0.87
CDC42BPB-203ENST00000558867 UBE2BP63146 152 aa9.62□□□□□ -0.87
CDC42BPB-203ENST00000558867 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
CDC42BPB-203ENST00000558867 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
CDC42BPB-203ENST00000558867 H3BQ85 93 aa9.6□□□□□ -0.87
CDC42BPB-203ENST00000558867 COX7BP24311 80 aa9.6□□□□□ -0.87
CDC42BPB-203ENST00000558867 FAM19A5Q7Z5A7 132 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPB-203ENST00000558867 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
CDC42BPB-203ENST00000558867 FAM168BA1KXE4 195 aa9.59□□□□□ -0.87
CDC42BPB-203ENST00000558867 J3QR89 54 aa9.59□□□□□ -0.87
CDC42BPB-203ENST00000558867 BAALC-AS2P0C853 105 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms