RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PPDPFQ9H3Y8 114 aa9.33□□□□□ -0.92
LINC01220-201ENST00000558575 MUC2Q02817 5179 aa9.33□□□□□ -0.92
LINC01220-201ENST00000558575 PRYO14603 147 aa9.32□□□□□ -0.92
LINC01220-201ENST00000558575 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
LINC01220-201ENST00000558575 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
LINC01220-201ENST00000558575 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
LINC01220-201ENST00000558575 PRLHP81277 87 aa9.31□□□□□ -0.92
LINC01220-201ENST00000558575 FAM19A1Q7Z5A9 133 aa9.31□□□□□ -0.92
LINC01220-201ENST00000558575 UBE2AP49459 152 aa9.3□□□□□ -0.92
LINC01220-201ENST00000558575 LINC00337Q8N6G1 96 aa9.3□□□□□ -0.92
LINC01220-201ENST00000558575 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
LINC01220-201ENST00000558575 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
LINC01220-201ENST00000558575 C2orf91Q6ZV80 131 aa9.27□□□□□ -0.93
LINC01220-201ENST00000558575 LINC00518Q8N0U6 118 aa9.27□□□□□ -0.93
LINC01220-201ENST00000558575 B5MCH6 92 aa9.26□□□□□ -0.93
LINC01220-201ENST00000558575 SLC25A34Q6PIV7 304 aa9.26□□□□□ -0.93
LINC01220-201ENST00000558575 OR13C6PQ8NH95 151 aa9.26□□□□□ -0.93
LINC01220-201ENST00000558575 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
LINC01220-201ENST00000558575 TRAV23DV6A0A075B6W5 121 aa9.25□□□□□ -0.93
LINC01220-201ENST00000558575 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
LINC01220-201ENST00000558575 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
LINC01220-201ENST00000558575 A4D1N5 150 aa9.23□□□□□ -0.93
LINC01220-201ENST00000558575 ZNF73O43830 326 aaPredicted RBP9.23□□□□□ -0.93
LINC01220-201ENST00000558575 PRR26Q8N8Z3 221 aa9.23□□□□□ -0.93
LINC01220-201ENST00000558575 HIGD2AQ9BW72 106 aa9.23□□□□□ -0.93
LINC01220-201ENST00000558575 S100A12P80511 92 aa9.22□□□□□ -0.93
LINC01220-201ENST00000558575 SMCR5Q8TEV8 140 aa9.22□□□□□ -0.93
LINC01220-201ENST00000558575 HIST1H4GQ99525 98 aa9.22□□□□□ -0.93
LINC01220-201ENST00000558575 ANAPC11Q9NYG5 84 aa9.22□□□□□ -0.93
LINC01220-201ENST00000558575 Q9BRP9 147 aa9.21□□□□□ -0.94
LINC01220-201ENST00000558575 A6NDN8 102 aa9.2□□□□□ -0.94
LINC01220-201ENST00000558575 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
LINC01220-201ENST00000558575 Q6ZRX8 168 aa9.2□□□□□ -0.94
LINC01220-201ENST00000558575 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
LINC01220-201ENST00000558575 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
LINC01220-201ENST00000558575 A0A087X002 238 aa9.18□□□□□ -0.94
LINC01220-201ENST00000558575 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
LINC01220-201ENST00000558575 C6orf99Q4VX62 202 aa9.17□□□□□ -0.94
LINC01220-201ENST00000558575 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
LINC01220-201ENST00000558575 SPRR4Q96PI1 79 aa9.16□□□□□ -0.94
LINC01220-201ENST00000558575 C12orf57Q99622 126 aa9.16□□□□□ -0.94
LINC01220-201ENST00000558575 TAL2Q16559 108 aa9.15□□□□□ -0.94
LINC01220-201ENST00000558575 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.94
LINC01220-201ENST00000558575 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
LINC01220-201ENST00000558575 CFC1P0CG37 223 aa9.14□□□□□ -0.95
LINC01220-201ENST00000558575 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
LINC01220-201ENST00000558575 CEND1Q8N111 149 aa9.14□□□□□ -0.95
LINC01220-201ENST00000558575 ELOF1P60002 83 aaKnown RBP9.13□□□□□ -0.95
LINC01220-201ENST00000558575 FAM229BQ4G0N7 80 aa9.13□□□□□ -0.95
LINC01220-201ENST00000558575 UQCR10Q9UDW1 63 aa9.13□□□□□ -0.95
LINC01220-201ENST00000558575 CRYGAP11844 174 aa9.12□□□□□ -0.95
LINC01220-201ENST00000558575 COX7BP24311 80 aa9.12□□□□□ -0.95
LINC01220-201ENST00000558575 HINT1P49773 126 aaPredicted RBP9.12□□□□□ -0.95
LINC01220-201ENST00000558575 TRBV7-6A0A0J9YX20 115 aa9.11□□□□□ -0.95
LINC01220-201ENST00000558575 SMIM6P0DI80 62 aa9.11□□□□□ -0.95
LINC01220-201ENST00000558575 FXYD2P54710 66 aa9.11□□□□□ -0.95
LINC01220-201ENST00000558575 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
LINC01220-201ENST00000558575 RPL13AP40429 203 aaKnown RBP9.1□□□□□ -0.95
LINC01220-201ENST00000558575 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
LINC01220-201ENST00000558575 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
LINC01220-201ENST00000558575 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
LINC01220-201ENST00000558575 GAGE2AQ6NT46 116 aa9.09□□□□□ -0.95
LINC01220-201ENST00000558575 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
LINC01220-201ENST00000558575 A0A0B4J2C4 111 aa9.08□□□□□ -0.96
LINC01220-201ENST00000558575 A0A1B0GWB2 263 aa9.08□□□□□ -0.96
LINC01220-201ENST00000558575 HSD52Q0P140 79 aa9.08□□□□□ -0.96
LINC01220-201ENST00000558575 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
LINC01220-201ENST00000558575 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
LINC01220-201ENST00000558575 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
LINC01220-201ENST00000558575 RAB37Q96AX2 223 aa9.05□□□□□ -0.96
LINC01220-201ENST00000558575 H7C2G1 150 aa9.04□□□□□ -0.96
LINC01220-201ENST00000558575 TMEM238LA0A1B0GVL6 79 aa9.02□□□□□ -0.97
LINC01220-201ENST00000558575 A6NJY4 79 aa9.02□□□□□ -0.97
LINC01220-201ENST00000558575 SPRR1BP22528 89 aa9.02□□□□□ -0.97
LINC01220-201ENST00000558575 LINC00575Q6W349 94 aa9.02□□□□□ -0.97
LINC01220-201ENST00000558575 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
LINC01220-201ENST00000558575 FSIP2Q5CZC0 6907 aa9.01□□□□□ -0.97
LINC01220-201ENST00000558575 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
LINC01220-201ENST00000558575 VAMP3Q15836 100 aa9.01□□□□□ -0.97
LINC01220-201ENST00000558575 BVES-AS1Q5T3Y7 98 aa9.01□□□□□ -0.97
LINC01220-201ENST00000558575 K7ERJ3 54 aa9□□□□□ -0.97
LINC01220-201ENST00000558575 NHP2Q9NX24 153 aaKnown RBP9□□□□□ -0.97
LINC01220-201ENST00000558575 IGLV5-48A0A075B6I7 105 aa8.98□□□□□ -0.97
LINC01220-201ENST00000558575 CTAG1AP78358 180 aa8.98□□□□□ -0.97
LINC01220-201ENST00000558575 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
LINC01220-201ENST00000558575 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
LINC01220-201ENST00000558575 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.98
LINC01220-201ENST00000558575 TSPAN13O95857 204 aa8.96□□□□□ -0.98
LINC01220-201ENST00000558575 Q8N377 158 aa8.96□□□□□ -0.98
LINC01220-201ENST00000558575 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
LINC01220-201ENST00000558575 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
LINC01220-201ENST00000558575 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
LINC01220-201ENST00000558575 MOBPQ13875 183 aa8.95□□□□□ -0.98
LINC01220-201ENST00000558575 Q8NBF4 154 aa8.95□□□□□ -0.98
LINC01220-201ENST00000558575 FAM218AQ96MZ4 157 aa8.95□□□□□ -0.98
LINC01220-201ENST00000558575 CRCT1Q9UGL9 99 aa8.95□□□□□ -0.98
LINC01220-201ENST00000558575 SLC25A20O43772 301 aa8.94□□□□□ -0.98
LINC01220-201ENST00000558575 Q1RN00 199 aa8.94□□□□□ -0.98
LINC01220-201ENST00000558575 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
LINC01220-201ENST00000558575 H0YGX0 51 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms