RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
TPM1-214ENST00000558544 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
TPM1-214ENST00000558544 A6NDN8 102 aa10.65□□□□□ -0.71
TPM1-214ENST00000558544 K7ERJ3 54 aa10.65□□□□□ -0.71
TPM1-214ENST00000558544 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.71
TPM1-214ENST00000558544 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.71
TPM1-214ENST00000558544 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.71
TPM1-214ENST00000558544 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
TPM1-214ENST00000558544 A4D1N5 150 aa10.64□□□□□ -0.71
TPM1-214ENST00000558544 PRYO14603 147 aa10.64□□□□□ -0.71
TPM1-214ENST00000558544 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
TPM1-214ENST00000558544 TMEM238LA0A1B0GVL6 79 aa10.62□□□□□ -0.71
TPM1-214ENST00000558544 A6NJY4 79 aa10.62□□□□□ -0.71
TPM1-214ENST00000558544 TAX1BP3O14907 124 aa10.62□□□□□ -0.71
TPM1-214ENST00000558544 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
TPM1-214ENST00000558544 KCNQ1DNQ9H478 68 aa10.62□□□□□ -0.71
TPM1-214ENST00000558544 ZNF861PO60384 105 aa10.61□□□□□ -0.71
TPM1-214ENST00000558544 UBE2AP49459 152 aa10.61□□□□□ -0.71
TPM1-214ENST00000558544 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
TPM1-214ENST00000558544 LINC00337Q8N6G1 96 aa10.61□□□□□ -0.71
TPM1-214ENST00000558544 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
TPM1-214ENST00000558544 CFC1BP0CG36 223 aa10.6□□□□□ -0.71
TPM1-214ENST00000558544 CFC1P0CG37 223 aa10.6□□□□□ -0.71
TPM1-214ENST00000558544 PRLHP81277 87 aa10.6□□□□□ -0.71
TPM1-214ENST00000558544 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
TPM1-214ENST00000558544 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
TPM1-214ENST00000558544 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
TPM1-214ENST00000558544 TRAV23DV6A0A075B6W5 121 aa10.58□□□□□ -0.72
TPM1-214ENST00000558544 H0Y9J4 135 aa10.58□□□□□ -0.72
TPM1-214ENST00000558544 RAB37Q96AX2 223 aa10.58□□□□□ -0.72
TPM1-214ENST00000558544 SPRR1AP35321 89 aa10.57□□□□□ -0.72
TPM1-214ENST00000558544 A0A0B4J2C4 111 aa10.56□□□□□ -0.72
TPM1-214ENST00000558544 ETDCA0A1B0GVM5 59 aa10.56□□□□□ -0.72
TPM1-214ENST00000558544 KRTAP4-16G5E9R7 235 aaPredicted RBP10.55□□□□□ -0.72
TPM1-214ENST00000558544 A0A1B0GV90 55 aa10.53□□□□□ -0.72
TPM1-214ENST00000558544 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
TPM1-214ENST00000558544 CBY1Q9Y3M2 126 aa10.53□□□□□ -0.72
TPM1-214ENST00000558544 C9orf118A6NHY6 69 aa10.52□□□□□ -0.72
TPM1-214ENST00000558544 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.72
TPM1-214ENST00000558544 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.72
TPM1-214ENST00000558544 TRAV13-2A0A0B4J235 113 aa10.52□□□□□ -0.73
TPM1-214ENST00000558544 KRTAP29-1A8MX34 341 aaPredicted RBP10.52□□□□□ -0.73
TPM1-214ENST00000558544 B5MCH6 92 aa10.52□□□□□ -0.73
TPM1-214ENST00000558544 OXTP01178 125 aa10.52□□□□□ -0.73
TPM1-214ENST00000558544 HIGD2AQ9BW72 106 aa10.52□□□□□ -0.73
TPM1-214ENST00000558544 TSPAN13O95857 204 aa10.51□□□□□ -0.73
TPM1-214ENST00000558544 H3BUT2 72 aa10.5□□□□□ -0.73
TPM1-214ENST00000558544 TNXBP22105 4242 aa10.49□□□□□ -0.73
TPM1-214ENST00000558544 RPL13AP40429 203 aaKnown RBP10.49□□□□□ -0.73
TPM1-214ENST00000558544 KRTAP1-4P0C5Y4 121 aa10.48□□□□□ -0.73
TPM1-214ENST00000558544 Q6ZRX8 168 aa10.48□□□□□ -0.73
TPM1-214ENST00000558544 H7C2G1 150 aa10.47□□□□□ -0.73
TPM1-214ENST00000558544 J3QL48 77 aa10.47□□□□□ -0.73
TPM1-214ENST00000558544 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
TPM1-214ENST00000558544 SMCR5Q8TEV8 140 aa10.47□□□□□ -0.73
TPM1-214ENST00000558544 LINC01600Q96MT4 127 aa10.47□□□□□ -0.73
TPM1-214ENST00000558544 A0A1W2PPM0 123 aa10.45□□□□□ -0.74
TPM1-214ENST00000558544 Q9BRP9 147 aa10.45□□□□□ -0.74
TPM1-214ENST00000558544 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
TPM1-214ENST00000558544 SMIM11BQ8TCY0 68 aa10.44□□□□□ -0.74
TPM1-214ENST00000558544 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
TPM1-214ENST00000558544 COX7BP24311 80 aa10.42□□□□□ -0.74
TPM1-214ENST00000558544 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
TPM1-214ENST00000558544 ERC2-IT1O76042 136 aa10.41□□□□□ -0.74
TPM1-214ENST00000558544 Q1RN00 199 aa10.41□□□□□ -0.74
TPM1-214ENST00000558544 PRR26Q8N8Z3 221 aa10.41□□□□□ -0.74
TPM1-214ENST00000558544 ANAPC11Q9NYG5 84 aa10.41□□□□□ -0.74
TPM1-214ENST00000558544 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
TPM1-214ENST00000558544 TRIAP1O43715 76 aa10.39□□□□□ -0.75
TPM1-214ENST00000558544 FABP2P12104 132 aa10.39□□□□□ -0.75
TPM1-214ENST00000558544 VAMP3Q15836 100 aa10.39□□□□□ -0.75
TPM1-214ENST00000558544 SPRR4Q96PI1 79 aa10.39□□□□□ -0.75
TPM1-214ENST00000558544 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
TPM1-214ENST00000558544 PSMB2P49721 201 aa10.38□□□□□ -0.75
TPM1-214ENST00000558544 A0A087X002 238 aa10.37□□□□□ -0.75
TPM1-214ENST00000558544 KRTAP10-8P60410 259 aa10.37□□□□□ -0.75
TPM1-214ENST00000558544 DHRS4-AS1Q9P1J3 65 aa10.37□□□□□ -0.75
TPM1-214ENST00000558544 HERC1Q15751 4861 aa10.36□□□□□ -0.75
TPM1-214ENST00000558544 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
TPM1-214ENST00000558544 K7EP34 96 aa10.35□□□□□ -0.75
TPM1-214ENST00000558544 CRYGAP11844 174 aa10.34□□□□□ -0.75
TPM1-214ENST00000558544 FAM229BQ4G0N7 80 aa10.34□□□□□ -0.75
TPM1-214ENST00000558544 GAGE2AQ6NT46 116 aa10.34□□□□□ -0.75
TPM1-214ENST00000558544 ST20-AS1Q8NBB2 130 aa10.34□□□□□ -0.75
TPM1-214ENST00000558544 TCL1BO95988 128 aa10.32□□□□□ -0.76
TPM1-214ENST00000558544 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
TPM1-214ENST00000558544 LYRM7Q5U5X0 104 aa10.32□□□□□ -0.76
TPM1-214ENST00000558544 KRTAP13-2Q52LG2 175 aa10.31□□□□□ -0.76
TPM1-214ENST00000558544 UBE2V1Q13404 147 aa10.3□□□□□ -0.76
TPM1-214ENST00000558544 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
TPM1-214ENST00000558544 CLEC2BQ92478 149 aa10.3□□□□□ -0.76
TPM1-214ENST00000558544 GTF2H5Q6ZYL4 71 aa10.29□□□□□ -0.76
TPM1-214ENST00000558544 COX6CP09669 75 aa10.28□□□□□ -0.76
TPM1-214ENST00000558544 C3orf22Q8N5N4 141 aa10.28□□□□□ -0.76
TPM1-214ENST00000558544 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
TPM1-214ENST00000558544 SLC25A20O43772 301 aa10.27□□□□□ -0.76
TPM1-214ENST00000558544 LINC00575Q6W349 94 aa10.27□□□□□ -0.76
TPM1-214ENST00000558544 TRBV20-1A0A075B6N2 111 aa10.26□□□□□ -0.77
TPM1-214ENST00000558544 H3BMG7 143 aa10.26□□□□□ -0.77
TPM1-214ENST00000558544 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms