RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KRTAP10-3P60369 221 aa9.19□□□□□ -0.94
SPG11-210ENST00000558319 CDC42SE1Q9NRR8 79 aa9.19□□□□□ -0.94
SPG11-210ENST00000558319 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
SPG11-210ENST00000558319 A0A1B0GVX0 72 aa9.18□□□□□ -0.94
SPG11-210ENST00000558319 H3BNG1 76 aa9.17□□□□□ -0.94
SPG11-210ENST00000558319 C10orf142B7Z368 130 aa9.17□□□□□ -0.94
SPG11-210ENST00000558319 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
SPG11-210ENST00000558319 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
SPG11-210ENST00000558319 TLN2Q9Y4G6 2542 aa9.17□□□□□ -0.94
SPG11-210ENST00000558319 DNAH12Q6ZR08 3092 aa9.16□□□□□ -0.94
SPG11-210ENST00000558319 CASC10Q5T4H9 136 aa9.16□□□□□ -0.94
SPG11-210ENST00000558319 Q8N1X5 172 aa9.16□□□□□ -0.94
SPG11-210ENST00000558319 IGLV5-37A0A075B6J1 123 aa9.15□□□□□ -0.94
SPG11-210ENST00000558319 PCSK5Q92824 1860 aa9.14□□□□□ -0.95
SPG11-210ENST00000558319 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
SPG11-210ENST00000558319 H3BS24 57 aa9.12□□□□□ -0.95
SPG11-210ENST00000558319 WIPF1O43516 503 aa9.12□□□□□ -0.95
SPG11-210ENST00000558319 SETD2Q9BYW2 2564 aaPredicted RBP9.11□□□□□ -0.95
SPG11-210ENST00000558319 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
SPG11-210ENST00000558319 LUZP6Q538Z0 58 aa9.1□□□□□ -0.95
SPG11-210ENST00000558319 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
SPG11-210ENST00000558319 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
SPG11-210ENST00000558319 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
SPG11-210ENST00000558319 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
SPG11-210ENST00000558319 A0A087WTM6 91 aa9.05□□□□□ -0.96
SPG11-210ENST00000558319 C5orf42Q9H799 3197 aa9.05□□□□□ -0.96
SPG11-210ENST00000558319 ZNF462Q96JM2 2506 aa9.05□□□□□ -0.96
SPG11-210ENST00000558319 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
SPG11-210ENST00000558319 PRAC1Q96KF2 57 aa9.04□□□□□ -0.96
SPG11-210ENST00000558319 FAM229BQ4G0N7 80 aa9.03□□□□□ -0.96
SPG11-210ENST00000558319 A0A1W2PNM2 257 aa9.03□□□□□ -0.96
SPG11-210ENST00000558319 SPANXA2-OT1Q8N9U9 137 aa9.03□□□□□ -0.96
SPG11-210ENST00000558319 Q1T7F1 81 aa9.02□□□□□ -0.96
SPG11-210ENST00000558319 ZNF861PO60384 105 aa9.02□□□□□ -0.97
SPG11-210ENST00000558319 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.97
SPG11-210ENST00000558319 PCNTO95613 3336 aa9.01□□□□□ -0.97
SPG11-210ENST00000558319 M0R2T5 61 aa9.01□□□□□ -0.97
SPG11-210ENST00000558319 ANKRD17O75179 2603 aaKnown RBP8.99□□□□□ -0.97
SPG11-210ENST00000558319 IGLV7-43P04211 117 aa8.96□□□□□ -0.98
SPG11-210ENST00000558319 USP9XQ93008 2570 aaPredicted RBP8.96□□□□□ -0.98
SPG11-210ENST00000558319 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
SPG11-210ENST00000558319 POLQO75417 2590 aa8.94□□□□□ -0.98
SPG11-210ENST00000558319 Q5XG85 94 aa8.94□□□□□ -0.98
SPG11-210ENST00000558319 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
SPG11-210ENST00000558319 PRR34Q9NV39 138 aa8.94□□□□□ -0.98
SPG11-210ENST00000558319 F8P00451 2351 aa8.93□□□□□ -0.98
SPG11-210ENST00000558319 PKD1L2Q7Z442 2459 aa8.92□□□□□ -0.98
SPG11-210ENST00000558319 PIEZO1Q92508 2521 aa8.91□□□□□ -0.98
SPG11-210ENST00000558319 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
SPG11-210ENST00000558319 C19orf73Q9NVV2 129 aa8.91□□□□□ -0.98
SPG11-210ENST00000558319 TNP2Q05952 138 aa8.91□□□□□ -0.98
SPG11-210ENST00000558319 ACANP16112 2415 aa8.9□□□□□ -0.98
SPG11-210ENST00000558319 SPTBN4Q9H254 2564 aa8.9□□□□□ -0.98
SPG11-210ENST00000558319 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.98
SPG11-210ENST00000558319 Q75L30 129 aa8.89□□□□□ -0.99
SPG11-210ENST00000558319 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
SPG11-210ENST00000558319 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
SPG11-210ENST00000558319 A0A1B0GU33 70 aa8.88□□□□□ -0.99
SPG11-210ENST00000558319 CR1P17927 2039 aa8.88□□□□□ -0.99
SPG11-210ENST00000558319 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
SPG11-210ENST00000558319 TLX1NBP0CAT3 122 aa8.86□□□□□ -0.99
SPG11-210ENST00000558319 CEP350Q5VT06 3117 aa8.86□□□□□ -0.99
SPG11-210ENST00000558319 CHD8Q9HCK8 2581 aa8.85□□□□□ -0.99
SPG11-210ENST00000558319 Q6ZSA8 131 aa8.85□□□□□ -0.99
SPG11-210ENST00000558319 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
SPG11-210ENST00000558319 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
SPG11-210ENST00000558319 BPTFQ12830 3046 aa8.84□□□□□ -0.99
SPG11-210ENST00000558319 IGLV7-46A0A075B6I9 117 aa8.83□□□□□ -1
SPG11-210ENST00000558319 HRES1P13985 223 aa8.83□□□□□ -1
SPG11-210ENST00000558319 MTORP42345 2549 aa8.83□□□□□ -1
SPG11-210ENST00000558319 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
SPG11-210ENST00000558319 KLK9Q2XQG4 91 aa8.82□□□□□ -1
SPG11-210ENST00000558319 LINC00483Q53H64 154 aa8.8□□□□□ -1
SPG11-210ENST00000558319 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
SPG11-210ENST00000558319 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
SPG11-210ENST00000558319 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
SPG11-210ENST00000558319 SPINK7P58062 85 aa8.79□□□□□ -1
SPG11-210ENST00000558319 Q5VV11 94 aa8.78□□□□□ -1
SPG11-210ENST00000558319 CEP295Q9C0D2 2601 aa8.77□□□□□ -1.01
SPG11-210ENST00000558319 USP9YO00507 2555 aaPredicted RBP8.77□□□□□ -1.01
SPG11-210ENST00000558319 A0A096LNT2 108 aa8.76□□□□□ -1.01
SPG11-210ENST00000558319 LINC01558Q9Y6Z2 57 aa8.76□□□□□ -1.01
SPG11-210ENST00000558319 A0A0A0MQY5 61 aa8.75□□□□□ -1.01
SPG11-210ENST00000558319 KRTAP1-3Q8IUG1 177 aa8.72□□□□□ -1.01
SPG11-210ENST00000558319 XIRP2A4UGR9 3374 aa8.72□□□□□ -1.01
SPG11-210ENST00000558319 FASNP49327 2511 aaKnown RBP8.71□□□□□ -1.02
SPG11-210ENST00000558319 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
SPG11-210ENST00000558319 OXTP01178 125 aa8.67□□□□□ -1.02
SPG11-210ENST00000558319 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
SPG11-210ENST00000558319 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
SPG11-210ENST00000558319 KRTAP1-1Q07627 177 aa8.65□□□□□ -1.02
SPG11-210ENST00000558319 USP24Q9UPU5 2620 aa8.63□□□□□ -1.03
SPG11-210ENST00000558319 S4R3F8 94 aa8.61□□□□□ -1.03
SPG11-210ENST00000558319 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.03
SPG11-210ENST00000558319 Q8NDZ9 215 aa8.59□□□□□ -1.03
SPG11-210ENST00000558319 Q5W150 140 aa8.57□□□□□ -1.04
SPG11-210ENST00000558319 CFAP54Q96N23 3096 aa8.57□□□□□ -1.04
SPG11-210ENST00000558319 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
SPG11-210ENST00000558319 BRCA2P51587 3418 aa8.56□□□□□ -1.04
SPG11-210ENST00000558319 ROMO1P60602 79 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms